RNA–Protein interactions for RNA: ENST00000513436.6

SERF1A-209, Transcript of small EDRK-rich factor 1A, human

TSL 3 BASIC

Gene SERF1A, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SERF1A-209	ENST00000513436	SCLT1	Q96NL6	688 aa		13.73	□□□□□ -0.21
SERF1A-209	ENST00000513436	UNC45A	Q9H3U1	944 aa		13.73	□□□□□ -0.21
SERF1A-209	ENST00000513436	DDX25	Q9UHL0	483 aa	Known RBP	13.73	□□□□□ -0.21
SERF1A-209	ENST00000513436	ST3GAL5	Q9UNP4	418 aa		13.73	□□□□□ -0.21
SERF1A-209	ENST00000513436	NOC2L	Q9Y3T9	749 aa	Known RBP	13.73	□□□□□ -0.21
SERF1A-209	ENST00000513436	MICAL3	Q7RTP6	2002 aa		13.73	□□□□□ -0.21
SERF1A-209	ENST00000513436	PFKFB2	O60825	505 aa		13.72	□□□□□ -0.21
SERF1A-209	ENST00000513436	TDP2	O95551	362 aa		13.72	□□□□□ -0.21
SERF1A-209	ENST00000513436	C22orf31	O95567	290 aa		13.72	□□□□□ -0.21
SERF1A-209	ENST00000513436	VTN	P04004	478 aa		13.72	□□□□□ -0.21
SERF1A-209	ENST00000513436	OAT	P04181	439 aa		13.72	□□□□□ -0.21
SERF1A-209	ENST00000513436	INF2	Q27J81	1249 aa		13.72	□□□□□ -0.21
SERF1A-209	ENST00000513436	PAN2	Q504Q3	1202 aa	Known RBP	13.72	□□□□□ -0.21
SERF1A-209	ENST00000513436	SPOUT1	Q5T280	376 aa	Known RBP	13.72	□□□□□ -0.21
SERF1A-209	ENST00000513436	BANK1	Q8NDB2	785 aa		13.72	□□□□□ -0.21
SERF1A-209	ENST00000513436	RDM1	Q8NG50	284 aa		13.72	□□□□□ -0.21
SERF1A-209	ENST00000513436	GJA10	Q969M2	543 aa		13.72	□□□□□ -0.21
SERF1A-209	ENST00000513436	OSMR	Q99650	979 aa		13.72	□□□□□ -0.21
SERF1A-209	ENST00000513436	CDHR5	Q9HBB8	845 aa		13.72	□□□□□ -0.21
SERF1A-209	ENST00000513436	TPCN1	Q9ULQ1	816 aa		13.72	□□□□□ -0.21
SERF1A-209	ENST00000513436	CYP3A7-CYP3A51P	A0A087WV96	503 aa		13.72	□□□□□ -0.21
SERF1A-209	ENST00000513436	ZBTB42	B2RXF5	422 aa		13.72	□□□□□ -0.21
SERF1A-209	ENST00000513436	CYP3A7	P24462	503 aa		13.72	□□□□□ -0.21
SERF1A-209	ENST00000513436	CLCN3	P51790	818 aa		13.72	□□□□□ -0.21
SERF1A-209	ENST00000513436	PRKCE	Q02156	737 aa		13.72	□□□□□ -0.21
SERF1A-209	ENST00000513436	TBC1D8B	Q0IIM8	1120 aa		13.72	□□□□□ -0.21
SERF1A-209	ENST00000513436	ZNF710	Q8N1W2	664 aa		13.72	□□□□□ -0.21
SERF1A-209	ENST00000513436	LINC01599	Q8WXQ3	324 aa		13.72	□□□□□ -0.21
SERF1A-209	ENST00000513436	ZNF689	Q96CS4	500 aa	Predicted RBP	13.72	□□□□□ -0.21
SERF1A-209	ENST00000513436	ADAM2	Q99965	735 aa		13.72	□□□□□ -0.21
SERF1A-209	ENST00000513436	UBE2Z	Q9H832	354 aa	Predicted RBP	13.72	□□□□□ -0.21
SERF1A-209	ENST00000513436	BRMS1	Q9HCU9	246 aa		13.72	□□□□□ -0.21
SERF1A-209	ENST00000513436	C1orf112	Q9NSG2	853 aa		13.72	□□□□□ -0.21
SERF1A-209	ENST00000513436	ORC3	Q9UBD5	711 aa	Predicted RBP	13.72	□□□□□ -0.21
SERF1A-209	ENST00000513436	SPTBN5	Q9NRC6	3674 aa	Known RBP	13.71	□□□□□ -0.21
SERF1A-209	ENST00000513436	EDIL3	O43854	480 aa		13.71	□□□□□ -0.21
SERF1A-209	ENST00000513436	PSMD10	O75832	226 aa		13.71	□□□□□ -0.21
SERF1A-209	ENST00000513436	ZSCAN20	P17040	1043 aa	Predicted RBP	13.71	□□□□□ -0.21
SERF1A-209	ENST00000513436	KCNA5	P22460	613 aa		13.71	□□□□□ -0.21
SERF1A-209	ENST00000513436	SARS	P49591	514 aa	Known RBP	13.71	□□□□□ -0.21
SERF1A-209	ENST00000513436	DNM2	P50570	870 aa		13.71	□□□□□ -0.21
SERF1A-209	ENST00000513436	AK2	P54819	239 aa		13.71	□□□□□ -0.21
SERF1A-209	ENST00000513436	NLRP11	P59045	1033 aa	Known RBP	13.71	□□□□□ -0.21
SERF1A-209	ENST00000513436	MOXD1	Q6UVY6	613 aa		13.71	□□□□□ -0.21
SERF1A-209	ENST00000513436	CMTR2	Q8IYT2	770 aa	Known RBP	13.71	□□□□□ -0.21
SERF1A-209	ENST00000513436	LRRC71	Q8N4P6	559 aa		13.71	□□□□□ -0.21
SERF1A-209	ENST00000513436	NAP1L4	Q99733	375 aa	Known RBP	13.71	□□□□□ -0.21
SERF1A-209	ENST00000513436	PHF20	Q9BVI0	1012 aa		13.71	□□□□□ -0.21
SERF1A-209	ENST00000513436	PLVAP	Q9BX97	442 aa		13.71	□□□□□ -0.21
SERF1A-209	ENST00000513436	LMAN2L	Q9H0V9	348 aa		13.71	□□□□□ -0.21
SERF1A-209	ENST00000513436	NSUN3	Q9H649	340 aa	Known RBP	13.71	□□□□□ -0.21
SERF1A-209	ENST00000513436	ERVK-5	Q9HDB9	667 aa		13.71	□□□□□ -0.21
SERF1A-209	ENST00000513436	SEPT9	Q9UHD8	586 aa	Predicted RBP	13.71	□□□□□ -0.21
SERF1A-209	ENST00000513436	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.71	□□□□□ -0.21
SERF1A-209	ENST00000513436	STK36	Q9NRP7	1315 aa		13.7	□□□□□ -0.22
SERF1A-209	ENST00000513436	DDX11L8	A8MPP1	907 aa		13.7	□□□□□ -0.22
SERF1A-209	ENST00000513436	C5orf67	F2Z3F1	127 aa		13.7	□□□□□ -0.22
SERF1A-209	ENST00000513436		M0R2N6	131 aa		13.7	□□□□□ -0.22
SERF1A-209	ENST00000513436	ZNF862	O60290	1169 aa		13.7	□□□□□ -0.22
SERF1A-209	ENST00000513436	CCNT1	O60563	726 aa	Known RBP	13.7	□□□□□ -0.22
SERF1A-209	ENST00000513436	CSPG5	O95196	566 aa		13.7	□□□□□ -0.22
SERF1A-209	ENST00000513436	NEK4	P51957	841 aa		13.7	□□□□□ -0.22
SERF1A-209	ENST00000513436	MTERF2	Q49AM1	385 aa		13.7	□□□□□ -0.22
SERF1A-209	ENST00000513436	XKR3	Q5GH77	459 aa		13.7	□□□□□ -0.22
SERF1A-209	ENST00000513436	PIK3AP1	Q6ZUJ8	805 aa		13.7	□□□□□ -0.22
SERF1A-209	ENST00000513436	SLC24A5	Q71RS6	500 aa		13.7	□□□□□ -0.22
SERF1A-209	ENST00000513436	NEK8	Q86SG6	692 aa		13.7	□□□□□ -0.22
SERF1A-209	ENST00000513436	TMEM40	Q8WWA1	233 aa		13.7	□□□□□ -0.22
SERF1A-209	ENST00000513436	CLP1	Q92989	425 aa	Known RBP	13.7	□□□□□ -0.22
SERF1A-209	ENST00000513436	NECAB3	Q96P71	396 aa	Predicted RBP	13.7	□□□□□ -0.22
SERF1A-209	ENST00000513436	TMX1	Q9H3N1	280 aa		13.7	□□□□□ -0.22
SERF1A-209	ENST00000513436	TRANK1	O15050	2925 aa		13.7	□□□□□ -0.22
SERF1A-209	ENST00000513436	XIRP2	A4UGR9	3374 aa		13.7	□□□□□ -0.22
SERF1A-209	ENST00000513436	ST18	O60284	1047 aa		13.69	□□□□□ -0.22
SERF1A-209	ENST00000513436	DKC1	O60832	514 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
SERF1A-209	ENST00000513436	GPR32	O75388	356 aa		13.69	□□□□□ -0.22
SERF1A-209	ENST00000513436	BAG4	O95429	457 aa	Known RBP	13.69	□□□□□ -0.22
SERF1A-209	ENST00000513436	GCFC2	P16383	781 aa	Known RBP	13.69	□□□□□ -0.22
SERF1A-209	ENST00000513436	TRIM29	Q14134	588 aa		13.69	□□□□□ -0.22
SERF1A-209	ENST00000513436	TCEAL5	Q5H9L2	206 aa		13.69	□□□□□ -0.22
SERF1A-209	ENST00000513436	NECAB1	Q8N987	351 aa		13.69	□□□□□ -0.22
SERF1A-209	ENST00000513436	NLRP7	Q8WX94	980 aa		13.69	□□□□□ -0.22
SERF1A-209	ENST00000513436	FAM20A	Q96MK3	541 aa		13.69	□□□□□ -0.22
SERF1A-209	ENST00000513436	ATP6V0A4	Q9HBG4	840 aa		13.69	□□□□□ -0.22
SERF1A-209	ENST00000513436	AAAS	Q9NRG9	546 aa		13.69	□□□□□ -0.22
SERF1A-209	ENST00000513436	RGS18	Q9NS28	235 aa		13.69	□□□□□ -0.22
SERF1A-209	ENST00000513436	MRPL42	Q9Y6G3	142 aa	Known RBP	13.69	□□□□□ -0.22
SERF1A-209	ENST00000513436	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	13.69	□□□□□ -0.22
SERF1A-209	ENST00000513436	TBKBP1	A7MCY6	615 aa		13.69	□□□□□ -0.22
SERF1A-209	ENST00000513436	GRM6	O15303	877 aa		13.69	□□□□□ -0.22
SERF1A-209	ENST00000513436	NCK2	O43639	380 aa		13.69	□□□□□ -0.22
SERF1A-209	ENST00000513436	DTNB	O60941	627 aa		13.69	□□□□□ -0.22
SERF1A-209	ENST00000513436	CDC42EP1	Q00587	391 aa		13.69	□□□□□ -0.22
SERF1A-209	ENST00000513436	UGCG	Q16739	394 aa		13.69	□□□□□ -0.22
SERF1A-209	ENST00000513436	NAALADL2	Q58DX5	795 aa		13.69	□□□□□ -0.22
SERF1A-209	ENST00000513436	FAM228A	Q86W67	206 aa		13.69	□□□□□ -0.22
SERF1A-209	ENST00000513436	ETNPPL	Q8TBG4	499 aa		13.69	□□□□□ -0.22
SERF1A-209	ENST00000513436	PPP2R3C	Q969Q6	453 aa		13.69	□□□□□ -0.22
SERF1A-209	ENST00000513436	ZNF668	Q96K58	619 aa	Predicted RBP	13.69	□□□□□ -0.22
SERF1A-209	ENST00000513436	RC3H2	Q9HBD1	1191 aa	Known RBP	13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms