RNA–Protein interactions for RNA: ENST00000513266.5

PTPN20-228, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 818 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-228ENST00000513266 GBP2P32456 591 aaPredicted RBP11.11□□□□□ -0.63
PTPN20-228ENST00000513266 CA8P35219 290 aa11.11□□□□□ -0.63
PTPN20-228ENST00000513266 HSD17B4P51659 736 aa11.11□□□□□ -0.63
PTPN20-228ENST00000513266 CSRP2Q16527 193 aa11.11□□□□□ -0.63
PTPN20-228ENST00000513266 SOWAHCQ53LP3 525 aaPredicted RBP11.11□□□□□ -0.63
PTPN20-228ENST00000513266 HSP90AB4PQ58FF6 505 aa11.11□□□□□ -0.63
PTPN20-228ENST00000513266 IER5Q5VY09 327 aa11.11□□□□□ -0.63
PTPN20-228ENST00000513266 METTL7BQ6UX53 244 aa11.11□□□□□ -0.63
PTPN20-228ENST00000513266 STOX1Q6ZVD7 989 aa11.11□□□□□ -0.63
PTPN20-228ENST00000513266 SLC39A11Q8N1S5 342 aa11.11□□□□□ -0.63
PTPN20-228ENST00000513266 GLG1Q92896 1179 aa11.11□□□□□ -0.63
PTPN20-228ENST00000513266 KIF1BPQ96EK5 621 aa11.11□□□□□ -0.63
PTPN20-228ENST00000513266 MYADMQ96S97 322 aa11.11□□□□□ -0.63
PTPN20-228ENST00000513266 ADAM2Q99965 735 aa11.11□□□□□ -0.63
PTPN20-228ENST00000513266 DDX23Q9BUQ8 820 aaKnown RBP11.11□□□□□ -0.63
PTPN20-228ENST00000513266 UBA5Q9GZZ9 404 aa11.11□□□□□ -0.63
PTPN20-228ENST00000513266 RNF19AQ9NV58 838 aa11.11□□□□□ -0.63
PTPN20-228ENST00000513266 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.1□□□□□ -0.63
PTPN20-228ENST00000513266 KANSL1LA0AUZ9 987 aa11.1□□□□□ -0.63
PTPN20-228ENST00000513266 RETP07949 1114 aa11.1□□□□□ -0.63
PTPN20-228ENST00000513266 GOLGA8HP0CJ92 632 aa11.1□□□□□ -0.63
PTPN20-228ENST00000513266 GHRHRQ02643 423 aa11.1□□□□□ -0.63
PTPN20-228ENST00000513266 NFX1Q12986 1120 aaKnown RBP11.1□□□□□ -0.63
PTPN20-228ENST00000513266 SEMA3FQ13275 785 aa11.1□□□□□ -0.63
PTPN20-228ENST00000513266 IL31Q6EBC2 164 aa11.1□□□□□ -0.63
PTPN20-228ENST00000513266 SLC24A5Q71RS6 500 aa11.1□□□□□ -0.63
PTPN20-228ENST00000513266 NXPE3Q969Y0 559 aa11.1□□□□□ -0.63
PTPN20-228ENST00000513266 CASD1Q96PB1 797 aa11.1□□□□□ -0.63
PTPN20-228ENST00000513266 TMEM117Q9H0C3 514 aa11.1□□□□□ -0.63
PTPN20-228ENST00000513266 NAPBQ9H115 298 aa11.1□□□□□ -0.63
PTPN20-228ENST00000513266 ZBP1Q9H171 429 aa11.1□□□□□ -0.63
PTPN20-228ENST00000513266 PRMT8Q9NR22 394 aaPredicted RBP11.1□□□□□ -0.63
PTPN20-228ENST00000513266 RGS18Q9NS28 235 aa11.1□□□□□ -0.63
PTPN20-228ENST00000513266 C1orf112Q9NSG2 853 aa11.1□□□□□ -0.63
PTPN20-228ENST00000513266 MRPL11Q9Y3B7 192 aaKnown RBP11.1□□□□□ -0.63
PTPN20-228ENST00000513266 IRAK3Q9Y616 596 aa11.1□□□□□ -0.63
PTPN20-228ENST00000513266 TMEM8BA6NDV4 472 aa11.09□□□□□ -0.63
PTPN20-228ENST00000513266 MARK3P27448 753 aa11.09□□□□□ -0.63
PTPN20-228ENST00000513266 SP4Q02446 784 aa11.09□□□□□ -0.63
PTPN20-228ENST00000513266 WTAPQ15007 396 aa11.09□□□□□ -0.63
PTPN20-228ENST00000513266 C15orf39Q6ZRI6 1047 aa11.09□□□□□ -0.63
PTPN20-228ENST00000513266 VPS52Q8N1B4 723 aa11.09□□□□□ -0.63
PTPN20-228ENST00000513266 ST13P5Q8NFI4 369 aaPredicted RBP11.09□□□□□ -0.63
PTPN20-228ENST00000513266 SHDQ96IW2 340 aa11.09□□□□□ -0.63
PTPN20-228ENST00000513266 CELF4Q9BZC1 486 aaKnown RBP11.09□□□□□ -0.63
PTPN20-228ENST00000513266 NACAP1Q9BZK3 213 aa11.09□□□□□ -0.63
PTPN20-228ENST00000513266 ATP6V0A4Q9HBG4 840 aa11.09□□□□□ -0.63
PTPN20-228ENST00000513266 TMEM161AQ9NX61 479 aa11.09□□□□□ -0.63
PTPN20-228ENST00000513266 RAB23Q9ULC3 237 aa11.09□□□□□ -0.63
PTPN20-228ENST00000513266 WASF3Q9UPY6 502 aa11.09□□□□□ -0.63
PTPN20-228ENST00000513266 TICRRQ7Z2Z1 1910 aa11.09□□□□□ -0.63
PTPN20-228ENST00000513266 KDM3AQ9Y4C1 1321 aa11.09□□□□□ -0.63
PTPN20-228ENST00000513266 BAZ2BQ9UIF8 2168 aaKnown RBP11.09□□□□□ -0.63
PTPN20-228ENST00000513266 F5P12259 2224 aa11.08□□□□□ -0.64
PTPN20-228ENST00000513266 DENND3A2RUS2 1198 aa11.08□□□□□ -0.64
PTPN20-228ENST00000513266 FAM170BA6NMN3 283 aa11.08□□□□□ -0.64
PTPN20-228ENST00000513266 ANHXE9PGG2 379 aa11.08□□□□□ -0.64
PTPN20-228ENST00000513266 M0QZ92 97 aa11.08□□□□□ -0.64
PTPN20-228ENST00000513266 FOXP2O15409 715 aa11.08□□□□□ -0.64
PTPN20-228ENST00000513266 RNF113AO15541 343 aaKnown RBP11.08□□□□□ -0.64
PTPN20-228ENST00000513266 RPLP2P05387 115 aaKnown RBP11.08□□□□□ -0.64
PTPN20-228ENST00000513266 TDGF1P13385 188 aa11.08□□□□□ -0.64
PTPN20-228ENST00000513266 CCND2P30279 289 aa11.08□□□□□ -0.64
PTPN20-228ENST00000513266 HOXA13P31271 388 aaPredicted RBP11.08□□□□□ -0.64
PTPN20-228ENST00000513266 LIMK1P53667 647 aa11.08□□□□□ -0.64
PTPN20-228ENST00000513266 IGBP1P78318 339 aa11.08□□□□□ -0.64
PTPN20-228ENST00000513266 FAM189BP81408 668 aa11.08□□□□□ -0.64
PTPN20-228ENST00000513266 SNW1Q13573 536 aaKnown RBP11.08□□□□□ -0.64
PTPN20-228ENST00000513266 HTR4Q13639 388 aa11.08□□□□□ -0.64
PTPN20-228ENST00000513266 NEDD9Q14511 834 aa11.08□□□□□ -0.64
PTPN20-228ENST00000513266 UBXN2BQ14CS0 331 aa11.08□□□□□ -0.64
PTPN20-228ENST00000513266 QRICH1Q2TAL8 776 aa11.08□□□□□ -0.64
PTPN20-228ENST00000513266 LRRC43Q8N309 656 aa11.08□□□□□ -0.64
PTPN20-228ENST00000513266 KBTBD3Q8NAB2 608 aa11.08□□□□□ -0.64
PTPN20-228ENST00000513266 BBXQ8WY36 941 aaPredicted RBP11.08□□□□□ -0.64
PTPN20-228ENST00000513266 GATA6Q92908 595 aa11.08□□□□□ -0.64
PTPN20-228ENST00000513266 SEC62Q99442 399 aaKnown RBP11.08□□□□□ -0.64
PTPN20-228ENST00000513266 FAM126AQ9BYI3 521 aaPredicted RBP11.08□□□□□ -0.64
PTPN20-228ENST00000513266 OSBPL6Q9BZF3 934 aa11.08□□□□□ -0.64
PTPN20-228ENST00000513266 WDR6Q9NNW5 1121 aaKnown RBP11.08□□□□□ -0.64
PTPN20-228ENST00000513266 NOC2LQ9Y3T9 749 aaKnown RBP11.08□□□□□ -0.64
PTPN20-228ENST00000513266 LAMA1P25391 3075 aa11.08□□□□□ -0.64
PTPN20-228ENST00000513266 SPDYE4A6NLX3 237 aa11.07□□□□□ -0.64
PTPN20-228ENST00000513266 SPATA31C2B4DYI2 1134 aa11.07□□□□□ -0.64
PTPN20-228ENST00000513266 NT5C1B-RDH14C9J2C7 533 aa11.07□□□□□ -0.64
PTPN20-228ENST00000513266 ORC4O43929 436 aa11.07□□□□□ -0.64
PTPN20-228ENST00000513266 KCNK5O95279 499 aa11.07□□□□□ -0.64
PTPN20-228ENST00000513266 SPINK2P20155 84 aa11.07□□□□□ -0.64
PTPN20-228ENST00000513266 MAGEA9P43362 315 aa11.07□□□□□ -0.64
PTPN20-228ENST00000513266 METAP2P50579 478 aaKnown RBP eCLIP11.07□□□□□ -0.64
PTPN20-228ENST00000513266 GPC5P78333 572 aa11.07□□□□□ -0.64
PTPN20-228ENST00000513266 MRPS9P82933 396 aaKnown RBP11.07□□□□□ -0.64
PTPN20-228ENST00000513266 GPATCH4Q5T3I0 446 aaKnown RBP11.07□□□□□ -0.64
PTPN20-228ENST00000513266 TMEM173Q86WV6 379 aaPredicted RBP11.07□□□□□ -0.64
PTPN20-228ENST00000513266 ADGRF4Q8IZF3 695 aa11.07□□□□□ -0.64
PTPN20-228ENST00000513266 CELF5Q8N6W0 485 aaKnown RBP11.07□□□□□ -0.64
PTPN20-228ENST00000513266 TMEM87AQ8NBN3 555 aa11.07□□□□□ -0.64
PTPN20-228ENST00000513266 TMEM40Q8WWA1 233 aa11.07□□□□□ -0.64
PTPN20-228ENST00000513266 CLDN23Q96B33 292 aa11.07□□□□□ -0.64
PTPN20-228ENST00000513266 MYL10Q9BUA6 226 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms