RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-231ENST00000512340 SCLYQ96I15 445 aa8.33□□□□□ -1.08
NR1I3-231ENST00000512340 CELF4Q9BZC1 486 aaKnown RBP8.33□□□□□ -1.08
NR1I3-231ENST00000512340 CYP26B1Q9NR63 512 aa8.33□□□□□ -1.08
NR1I3-231ENST00000512340 CCDC39Q9UFE4 941 aa8.33□□□□□ -1.08
NR1I3-231ENST00000512340 MSRAQ9UJ68 235 aa8.33□□□□□ -1.08
NR1I3-231ENST00000512340 TRIP12Q14669 1992 aaPredicted RBP8.32□□□□□ -1.08
NR1I3-231ENST00000512340 VWA3AA6NCI4 1184 aa8.32□□□□□ -1.08
NR1I3-231ENST00000512340 POTEMA6NI47 508 aa8.32□□□□□ -1.08
NR1I3-231ENST00000512340 ZNF862O60290 1169 aa8.32□□□□□ -1.08
NR1I3-231ENST00000512340 SLITRK3O94933 977 aa8.32□□□□□ -1.08
NR1I3-231ENST00000512340 C22orf31O95567 290 aa8.32□□□□□ -1.08
NR1I3-231ENST00000512340 CXCL10P02778 98 aa8.32□□□□□ -1.08
NR1I3-231ENST00000512340 CTSHP09668 335 aa8.32□□□□□ -1.08
NR1I3-231ENST00000512340 TOB1P50616 345 aaPredicted RBP8.32□□□□□ -1.08
NR1I3-231ENST00000512340 CRYBB1P53674 252 aaPredicted RBP8.32□□□□□ -1.08
NR1I3-231ENST00000512340 NUCB2P80303 420 aa8.32□□□□□ -1.08
NR1I3-231ENST00000512340 SPIRE1Q08AE8 756 aa8.32□□□□□ -1.08
NR1I3-231ENST00000512340 PAK2Q13177 524 aa8.32□□□□□ -1.08
NR1I3-231ENST00000512340 PCBP1Q15365 356 aaKnown RBP eCLIP8.32□□□□□ -1.08
NR1I3-231ENST00000512340 RAB30Q15771 203 aa8.32□□□□□ -1.08
NR1I3-231ENST00000512340 TMEM240Q5SV17 173 aa8.32□□□□□ -1.08
NR1I3-231ENST00000512340 MARCH8Q5T0T0 291 aa8.32□□□□□ -1.08
NR1I3-231ENST00000512340 TSHZ1Q6ZSZ6 1077 aa8.32□□□□□ -1.08
NR1I3-231ENST00000512340 ZNF410Q86VK4 478 aa8.32□□□□□ -1.08
NR1I3-231ENST00000512340 IGSF22Q8N9C0 903 aa8.32□□□□□ -1.08
NR1I3-231ENST00000512340 SPRYD3Q8NCJ5 442 aa8.32□□□□□ -1.08
NR1I3-231ENST00000512340 PHOSPHO2Q8TCD6 241 aa8.32□□□□□ -1.08
NR1I3-231ENST00000512340 KCNG4Q8TDN1 519 aa8.32□□□□□ -1.08
NR1I3-231ENST00000512340 PPP1R13LQ8WUF5 828 aa8.32□□□□□ -1.08
NR1I3-231ENST00000512340 NLRP7Q8WX94 980 aa8.32□□□□□ -1.08
NR1I3-231ENST00000512340 DHX38Q92620 1227 aaKnown RBP8.32□□□□□ -1.08
NR1I3-231ENST00000512340 SYMPKQ92797 1274 aaKnown RBP8.32□□□□□ -1.08
NR1I3-231ENST00000512340 GJA10Q969M2 543 aa8.32□□□□□ -1.08
NR1I3-231ENST00000512340 SLC9A7Q96T83 725 aa8.32□□□□□ -1.08
NR1I3-231ENST00000512340 MTRQ99707 1265 aa8.32□□□□□ -1.08
NR1I3-231ENST00000512340 HSD17B14Q9BPX1 270 aa8.32□□□□□ -1.08
NR1I3-231ENST00000512340 PYM1Q9BRP8 204 aaKnown RBP8.32□□□□□ -1.08
NR1I3-231ENST00000512340 ZBED2Q9BTP6 218 aa8.32□□□□□ -1.08
NR1I3-231ENST00000512340 COL25A1Q9BXS0 654 aaPredicted RBP8.32□□□□□ -1.08
NR1I3-231ENST00000512340 IFIH1Q9BYX4 1025 aaKnown RBP8.32□□□□□ -1.08
NR1I3-231ENST00000512340 GCOM2Q9BZD3 368 aaPredicted RBP8.32□□□□□ -1.08
NR1I3-231ENST00000512340 WNT8AQ9H1J5 351 aa8.32□□□□□ -1.08
NR1I3-231ENST00000512340 TMEM60Q9H2L4 133 aa8.32□□□□□ -1.08
NR1I3-231ENST00000512340 ATP6V0A4Q9HBG4 840 aa8.32□□□□□ -1.08
NR1I3-231ENST00000512340 SUCLA2Q9P2R7 463 aaPredicted RBP8.32□□□□□ -1.08
NR1I3-231ENST00000512340 DBR1Q9UK59 544 aaKnown RBP8.32□□□□□ -1.08
NR1I3-231ENST00000512340 MTMR6Q9Y217 621 aa8.32□□□□□ -1.08
NR1I3-231ENST00000512340 GINS2Q9Y248 185 aa8.32□□□□□ -1.08
NR1I3-231ENST00000512340 CDY2AQ9Y6F7 541 aa8.32□□□□□ -1.08
NR1I3-231ENST00000512340 PHLPP2Q6ZVD8 1323 aa8.31□□□□□ -1.08
NR1I3-231ENST00000512340 MAFO75444 373 aaPredicted RBP8.31□□□□□ -1.08
NR1I3-231ENST00000512340 RPS6KA5O75582 802 aa8.31□□□□□ -1.08
NR1I3-231ENST00000512340 YEATS4O95619 227 aa8.31□□□□□ -1.08
NR1I3-231ENST00000512340 F13A1P00488 732 aa8.31□□□□□ -1.08
NR1I3-231ENST00000512340 STAG3L1P0CL83 205 aa8.31□□□□□ -1.08
NR1I3-231ENST00000512340 ACRP10323 421 aa8.31□□□□□ -1.08
NR1I3-231ENST00000512340 ZSCAN20P17040 1043 aaPredicted RBP8.31□□□□□ -1.08
NR1I3-231ENST00000512340 ATP4AP20648 1035 aa8.31□□□□□ -1.08
NR1I3-231ENST00000512340 SFPQP23246 707 aaKnown RBP eCLIP8.31□□□□□ -1.08
NR1I3-231ENST00000512340 SMAD3P84022 425 aaKnown RBP8.31□□□□□ -1.08
NR1I3-231ENST00000512340 RESTQ13127 1097 aa8.31□□□□□ -1.08
NR1I3-231ENST00000512340 PPP2R5AQ15172 486 aa8.31□□□□□ -1.08
NR1I3-231ENST00000512340 SHHQ15465 462 aa8.31□□□□□ -1.08
NR1I3-231ENST00000512340 TARBP2Q15633 366 aaKnown RBP8.31□□□□□ -1.08
NR1I3-231ENST00000512340 ZRSR1Q15695 479 aaKnown RBP8.31□□□□□ -1.08
NR1I3-231ENST00000512340 UGCGQ16739 394 aa8.31□□□□□ -1.08
NR1I3-231ENST00000512340 TRIM71Q2Q1W2 868 aaKnown RBP8.31□□□□□ -1.08
NR1I3-231ENST00000512340 RUFY4Q6ZNE9 571 aa8.31□□□□□ -1.08
NR1I3-231ENST00000512340 ANO5Q75V66 913 aa8.31□□□□□ -1.08
NR1I3-231ENST00000512340 OTOP2Q7RTS6 562 aa8.31□□□□□ -1.08
NR1I3-231ENST00000512340 APBB1IPQ7Z5R6 666 aaPredicted RBP8.31□□□□□ -1.08
NR1I3-231ENST00000512340 CATSPER3Q86XQ3 398 aa8.31□□□□□ -1.08
NR1I3-231ENST00000512340 KIAA0319LQ8IZA0 1049 aa8.31□□□□□ -1.08
NR1I3-231ENST00000512340 KRI1Q8N9T8 703 aaKnown RBP8.31□□□□□ -1.08
NR1I3-231ENST00000512340 TRAPPC12Q8WVT3 735 aa8.31□□□□□ -1.08
NR1I3-231ENST00000512340 CCDC34Q96HJ3 373 aa8.31□□□□□ -1.08
NR1I3-231ENST00000512340 IFT74Q96LB3 600 aa8.31□□□□□ -1.08
NR1I3-231ENST00000512340 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.31□□□□□ -1.08
NR1I3-231ENST00000512340 TIPINQ9BVW5 301 aa8.31□□□□□ -1.08
NR1I3-231ENST00000512340 LRRC27Q9C0I9 530 aa8.31□□□□□ -1.08
NR1I3-231ENST00000512340 RGL1Q9NZL6 768 aa8.31□□□□□ -1.08
NR1I3-231ENST00000512340 KCND2Q9NZV8 630 aa8.31□□□□□ -1.08
NR1I3-231ENST00000512340 TELO2Q9Y4R8 837 aa8.31□□□□□ -1.08
NR1I3-231ENST00000512340 MORC2Q9Y6X9 1032 aaPredicted RBP8.31□□□□□ -1.08
NR1I3-231ENST00000512340 UMODL1Q5DID0 1318 aa8.3□□□□□ -1.08
NR1I3-231ENST00000512340 TTC28Q96AY4 2481 aa8.3□□□□□ -1.08
NR1I3-231ENST00000512340 DENND3A2RUS2 1198 aa8.3□□□□□ -1.08
NR1I3-231ENST00000512340 GHRP10912 638 aa8.3□□□□□ -1.08
NR1I3-231ENST00000512340 SKIP12755 728 aa8.3□□□□□ -1.08
NR1I3-231ENST00000512340 ATP2A2P16615 1042 aaKnown RBP8.3□□□□□ -1.08
NR1I3-231ENST00000512340 NCLP19338 710 aaKnown RBP8.3□□□□□ -1.08
NR1I3-231ENST00000512340 ITGB8P26012 769 aa8.3□□□□□ -1.08
NR1I3-231ENST00000512340 ABCD1P33897 745 aa8.3□□□□□ -1.08
NR1I3-231ENST00000512340 PHKA2P46019 1235 aa8.3□□□□□ -1.08
NR1I3-231ENST00000512340 CLCN3P51790 818 aa8.3□□□□□ -1.08
NR1I3-231ENST00000512340 NLRP11P59045 1033 aaKnown RBP8.3□□□□□ -1.08
NR1I3-231ENST00000512340 KRT85P78386 507 aa8.3□□□□□ -1.08
NR1I3-231ENST00000512340 NFX1Q12986 1120 aaKnown RBP8.3□□□□□ -1.08
NR1I3-231ENST00000512340 NBR1Q14596 966 aa8.3□□□□□ -1.08
NR1I3-231ENST00000512340 EMC2Q15006 297 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms