RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 AAASQ9NRG9 546 aa5.55□□□□□ -1.52
TRAPPC11-208ENST00000511955 TRMT13Q9NUP7 481 aaKnown RBP5.55□□□□□ -1.52
TRAPPC11-208ENST00000511955 PSD3Q9NYI0 1048 aa5.55□□□□□ -1.52
TRAPPC11-208ENST00000511955 BARX2Q9UMQ3 279 aaPredicted RBP5.55□□□□□ -1.52
TRAPPC11-208ENST00000511955 KIF3AQ9Y496 699 aa5.55□□□□□ -1.52
TRAPPC11-208ENST00000511955 SLC30A1Q9Y6M5 507 aa5.55□□□□□ -1.52
TRAPPC11-208ENST00000511955 LRRC72A6NJI9 287 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 B4DLN1 442 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 GRM8O00222 908 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 HOXC11O43248 304 aaPredicted RBP5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 NEMFO60524 1076 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 TBX18O95935 607 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 ZKSCAN1P17029 563 aaPredicted RBP5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 WEE1P30291 646 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 HOXC12P31275 282 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 GTF2A1P52655 376 aaPredicted RBP5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 TGFB2P61812 414 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 MTMR2Q13614 643 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 STAT4Q14765 748 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 ARHGEF6Q15052 776 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 MMEL1Q495T6 779 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 PRPF40BQ6NWY9 871 aaKnown RBP5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 ARHGAP27Q6ZUM4 889 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 CCDC186Q7Z3E2 898 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 TMEM110Q86TL2 294 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 ATCAYQ86WG3 371 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 RNF168Q8IYW5 571 aaPredicted RBP5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 TTLL6Q8N841 843 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 RASSF8Q8NHQ8 419 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 EPS8L3Q8TE67 593 aaKnown RBP5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 SHDQ96IW2 340 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 UBXN10Q96LJ8 280 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 COG8Q96MW5 612 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 MEIS3Q99687 375 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 API5Q9BZZ5 524 aaKnown RBP5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 VEZTQ9HBM0 779 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 ARGLU1Q9NWB6 273 aaPredicted RBP5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 QPCTLQ9NXS2 382 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 MAPRE3Q9UPY8 281 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 DAGLAQ9Y4D2 1042 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 PCDHGB5Q9Y5G0 923 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 TNRC6CQ9HCJ0 1690 aaKnown RBP5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 KIF2AO00139 706 aaPredicted RBP5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 GPR39O43194 453 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 ZBED4O75132 1171 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 TADA3O75528 432 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 MICAL2O94851 1124 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 TBC1D8O95759 1140 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 PCCAP05165 728 aaPredicted RBP5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 ASGR2P07307 311 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 P4HA1P13674 534 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 CPEP16870 476 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 CD9P21926 228 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 KRT9P35527 623 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 ZAP70P43403 619 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 GTF2IP78347 998 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 SP140Q13342 867 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 EPHA10Q5JZY3 1008 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 FAM205BPQ63HN1 556 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 BRICD5Q6PL45 260 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 HEATR4Q86WZ0 1026 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 ZNF619Q8N2I2 560 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 PPM1NQ8N819 430 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 CCDC114Q96M63 670 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 NIFKQ9BYG3 293 aaKnown RBP5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 LRRCC1Q9C099 1032 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 CCDC68Q9H2F9 335 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 TNKS2Q9H2K2 1166 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 GREM2Q9H772 168 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 PDLIM7Q9NR12 457 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 HPF1Q9NWY4 346 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 ACTR10Q9NZ32 417 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 CDC23Q9UJX2 597 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 SUFUQ9UMX1 484 aa5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 NOSIPQ9Y314 301 aaKnown RBP5.54□□□□□ -1.52
TRAPPC11-208ENST00000511955 TBKBP1A7MCY6 615 aa5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 UBTFL1P0CB47 393 aaPredicted RBP5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 POTEIP0CG38 1075 aa5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 HARSP12081 509 aaKnown RBP5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 RPS2P15880 293 aaKnown RBP5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 NPR1P16066 1061 aa5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 PMS1P54277 932 aaKnown RBP5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 TRIM28Q13263 835 aaKnown RBP5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 PPP1R7Q15435 360 aa5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 MEA1Q16626 185 aa5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 SYDE2Q5VT97 1194 aa5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 KAZNQ674X7 775 aa5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 LIN54Q6MZP7 749 aa5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 LMBR1LQ6UX01 489 aa5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 RUFY3Q7L099 469 aa5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 CCDC91Q7Z6B0 441 aa5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 CCAR2Q8N163 923 aaKnown RBP5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 KLHDC4Q8TBB5 520 aa5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 UCMAQ8WVF2 138 aa5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 CELF1Q92879 486 aaKnown RBP5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 MASTLQ96GX5 879 aa5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 SUCLG2Q96I99 432 aa5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 SGCZQ96LD1 299 aa5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 ASB2Q96Q27 587 aa5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 PANK2Q9BZ23 570 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms