RNA–Protein interactions for RNA: ENST00000511722.5

AFF1-208, Transcript of AF4/FMR2 family member 1, humanhuman

TSL 4

Gene AFF1, Length 638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-208ENST00000511722 SWSAP1Q6NVH7 229 aa20.44■□□□□ 0.86
AFF1-208ENST00000511722 NEK9Q8TD19 979 aa20.44■□□□□ 0.86
AFF1-208ENST00000511722 ATP8B4Q8TF62 1192 aa20.44■□□□□ 0.86
AFF1-208ENST00000511722 MARCH6O60337 910 aa20.43■□□□□ 0.86
AFF1-208ENST00000511722 CSPG5O95196 566 aa20.43■□□□□ 0.86
AFF1-208ENST00000511722 BAG4O95429 457 aaKnown RBP20.43■□□□□ 0.86
AFF1-208ENST00000511722 GATMP50440 423 aa20.43■□□□□ 0.86
AFF1-208ENST00000511722 SLC26A2P50443 739 aa20.43■□□□□ 0.86
AFF1-208ENST00000511722 KRT76Q01546 638 aa20.43■□□□□ 0.86
AFF1-208ENST00000511722 LETM2Q2VYF4 491 aa20.43■□□□□ 0.86
AFF1-208ENST00000511722 TIGD5Q53EQ6 642 aa20.43■□□□□ 0.86
AFF1-208ENST00000511722 NOSTRINQ8IVI9 506 aa20.43■□□□□ 0.86
AFF1-208ENST00000511722 KIAA0319LQ8IZA0 1049 aa20.43■□□□□ 0.86
AFF1-208ENST00000511722 TMEM40Q8WWA1 233 aa20.43■□□□□ 0.86
AFF1-208ENST00000511722 TNPO1Q92973 898 aaKnown RBP20.43■□□□□ 0.86
AFF1-208ENST00000511722 ZNF577Q9BSK1 485 aa20.43■□□□□ 0.86
AFF1-208ENST00000511722 NSUN3Q9H649 340 aaKnown RBP20.43■□□□□ 0.86
AFF1-208ENST00000511722 ZNF302Q9NR11 478 aa20.43■□□□□ 0.86
AFF1-208ENST00000511722 GJB4Q9NTQ9 266 aa20.43■□□□□ 0.86
AFF1-208ENST00000511722 MRPL42Q9Y6G3 142 aaKnown RBP20.43■□□□□ 0.86
AFF1-208ENST00000511722 SQORQ9Y6N5 450 aa20.43■□□□□ 0.86
AFF1-208ENST00000511722 TRIOO75962 3097 aa20.43■□□□□ 0.86
AFF1-208ENST00000511722 MYO7AQ13402 2215 aa20.42■□□□□ 0.86
AFF1-208ENST00000511722 M0QZ92 97 aa20.42■□□□□ 0.86
AFF1-208ENST00000511722 TBX3O15119 743 aa20.42■□□□□ 0.86
AFF1-208ENST00000511722 HBP1O60381 514 aa20.42■□□□□ 0.86
AFF1-208ENST00000511722 U2AF2P26368 475 aaKnown RBP eCLIP20.42■□□□□ 0.862e-6■□□□□ 10.1
AFF1-208ENST00000511722 FOSBP53539 338 aa20.42■□□□□ 0.86
AFF1-208ENST00000511722 GUCY1B3Q02153 619 aa20.42■□□□□ 0.86
AFF1-208ENST00000511722 PAK2Q13177 524 aa20.42■□□□□ 0.86
AFF1-208ENST00000511722 NR5A1Q13285 461 aa20.42■□□□□ 0.86
AFF1-208ENST00000511722 COL19A1Q14993 1142 aa20.42■□□□□ 0.86
AFF1-208ENST00000511722 PRR16Q569H4 304 aa20.42■□□□□ 0.86
AFF1-208ENST00000511722 MCTP1Q6DN14 999 aa20.42■□□□□ 0.86
AFF1-208ENST00000511722 PTCRAQ6ISU1 281 aaPredicted RBP20.42■□□□□ 0.86
AFF1-208ENST00000511722 PDXDC2PQ6P474 469 aa20.42■□□□□ 0.86
AFF1-208ENST00000511722 TRMT1LQ7Z2T5 733 aaKnown RBP20.42■□□□□ 0.86
AFF1-208ENST00000511722 OXER1Q8TDS5 423 aa20.42■□□□□ 0.86
AFF1-208ENST00000511722 TNFRSF25Q93038 417 aa20.42■□□□□ 0.86
AFF1-208ENST00000511722 LENG9Q96B70 501 aa20.42■□□□□ 0.86
AFF1-208ENST00000511722 FAM20AQ96MK3 541 aa20.42■□□□□ 0.86
AFF1-208ENST00000511722 PPP1R16BQ96T49 567 aa20.42■□□□□ 0.86
AFF1-208ENST00000511722 GINS2Q9Y248 185 aa20.42■□□□□ 0.86
AFF1-208ENST00000511722 KDM3AQ9Y4C1 1321 aa20.42■□□□□ 0.86
AFF1-208ENST00000511722 NLRC5Q86WI3 1866 aa20.41■□□□□ 0.86
AFF1-208ENST00000511722 TTC3P53804 2025 aa20.41■□□□□ 0.86
AFF1-208ENST00000511722 MGEA5O60502 916 aa20.41■□□□□ 0.86
AFF1-208ENST00000511722 CCNT1O60563 726 aaKnown RBP20.41■□□□□ 0.86
AFF1-208ENST00000511722 RPLP2P05387 115 aaKnown RBP20.41■□□□□ 0.86
AFF1-208ENST00000511722 RB1P06400 928 aa20.41■□□□□ 0.86
AFF1-208ENST00000511722 CAMK1Q14012 370 aa20.41■□□□□ 0.86
AFF1-208ENST00000511722 FAM160B1Q5W0V3 765 aa20.41■□□□□ 0.86
AFF1-208ENST00000511722 MIS18BP1Q6P0N0 1132 aa20.41■□□□□ 0.86
AFF1-208ENST00000511722 FAM178BQ8IXR5 827 aa20.41■□□□□ 0.86
AFF1-208ENST00000511722 NME8Q8N427 588 aa20.41■□□□□ 0.86
AFF1-208ENST00000511722 PABPC5Q96DU9 382 aaKnown RBP20.41■□□□□ 0.86
AFF1-208ENST00000511722 MBOAT7Q96N66 472 aa20.41■□□□□ 0.86
AFF1-208ENST00000511722 RIT2Q99578 217 aa20.41■□□□□ 0.86
AFF1-208ENST00000511722 C11orf84Q9BUA3 381 aaPredicted RBP20.41■□□□□ 0.86
AFF1-208ENST00000511722 FTHL17Q9BXU8 183 aa20.41■□□□□ 0.86
AFF1-208ENST00000511722 ALG13Q9NP73 1137 aaKnown RBP20.41■□□□□ 0.86
AFF1-208ENST00000511722 DDX25Q9UHL0 483 aaKnown RBP20.41■□□□□ 0.86
AFF1-208ENST00000511722 NOC2LQ9Y3T9 749 aaKnown RBP20.41■□□□□ 0.86
AFF1-208ENST00000511722 GRXCR2A6NFK2 248 aa20.4■□□□□ 0.86
AFF1-208ENST00000511722 C22orf31O95567 290 aa20.4■□□□□ 0.86
AFF1-208ENST00000511722 IBSPP21815 317 aaPredicted RBP20.4■□□□□ 0.86
AFF1-208ENST00000511722 DNAJB1P25685 340 aa20.4■□□□□ 0.86
AFF1-208ENST00000511722 GTF2F1P35269 517 aaKnown RBP eCLIP20.4■□□□□ 0.86
AFF1-208ENST00000511722 LTBRP36941 435 aa20.4■□□□□ 0.86
AFF1-208ENST00000511722 PAN2Q504Q3 1202 aaKnown RBP20.4■□□□□ 0.86
AFF1-208ENST00000511722 EP400NLQ6ZTU2 488 aa20.4■□□□□ 0.86
AFF1-208ENST00000511722 BRAPQ7Z569 592 aa20.4■□□□□ 0.86
AFF1-208ENST00000511722 NPAS4Q8IUM7 802 aa20.4■□□□□ 0.86
AFF1-208ENST00000511722 SLFN12Q8IYM2 578 aa20.4■□□□□ 0.86
AFF1-208ENST00000511722 C1QTNF1Q9BXJ1 281 aa20.4■□□□□ 0.86
AFF1-208ENST00000511722 ERVK-5Q9HDB9 667 aa20.4■□□□□ 0.86
AFF1-208ENST00000511722 C11orf16Q9NQ32 467 aa20.4■□□□□ 0.86
AFF1-208ENST00000511722 MAFBQ9Y5Q3 323 aaPredicted RBP20.4■□□□□ 0.86
AFF1-208ENST00000511722 RALGAPA2Q2PPJ7 1873 aa20.39■□□□□ 0.86
AFF1-208ENST00000511722 DLX2Q07687 328 aaPredicted RBP20.39■□□□□ 0.85
AFF1-208ENST00000511722 HYAL1Q12794 435 aa20.39■□□□□ 0.85
AFF1-208ENST00000511722 NFX1Q12986 1120 aaKnown RBP20.39■□□□□ 0.85
AFF1-208ENST00000511722 RILPL1Q5EBL4 403 aa20.39■□□□□ 0.85
AFF1-208ENST00000511722 ZNF484Q5JVG2 852 aa20.39■□□□□ 0.85
AFF1-208ENST00000511722 ZNF746Q6NUN9 644 aaPredicted RBP20.39■□□□□ 0.85
AFF1-208ENST00000511722 CLDND1Q9NY35 253 aa20.39■□□□□ 0.85
AFF1-208ENST00000511722 DAXXQ9UER7 740 aaPredicted RBP20.39■□□□□ 0.85
AFF1-208ENST00000511722 PLAGL2Q9UPG8 496 aa20.39■□□□□ 0.85
AFF1-208ENST00000511722 COL1A2P08123 1366 aa20.38■□□□□ 0.85
AFF1-208ENST00000511722 DTNBO60941 627 aa20.38■□□□□ 0.85
AFF1-208ENST00000511722 KIZQ2M2Z5 673 aa20.38■□□□□ 0.85
AFF1-208ENST00000511722 CKAP2LQ8IYA6 745 aa20.38■□□□□ 0.85
AFF1-208ENST00000511722 SMAP1Q8IYB5 467 aaPredicted RBP20.38■□□□□ 0.85
AFF1-208ENST00000511722 CMTR2Q8IYT2 770 aaKnown RBP20.38■□□□□ 0.85
AFF1-208ENST00000511722 GJA10Q969M2 543 aa20.38■□□□□ 0.85
AFF1-208ENST00000511722 LRFN3Q9BTN0 628 aa20.38■□□□□ 0.85
AFF1-208ENST00000511722 TEKT3Q9BXF9 490 aa20.38■□□□□ 0.85
AFF1-208ENST00000511722 GABBR1Q9UBS5 961 aa20.38■□□□□ 0.85
AFF1-208ENST00000511722 ST3GAL5Q9UNP4 418 aa20.38■□□□□ 0.85
AFF1-208ENST00000511722 RWDD3Q9Y3V2 267 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms