RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 DIS3L2Q8IYB7 885 aaKnown RBP5.31□□□□□ -1.56
PTPN13-209ENST00000511467 ATL2Q8NHH9 583 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 CCDC126Q96EE4 140 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 SNX25Q9H3E2 840 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 ANKEF1Q9NU02 776 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 FOXD4L1Q9NU39 408 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 OATP04181 439 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 EPHB4P54760 987 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 RAD51Q06609 339 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 ANO4Q32M45 955 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 FOXD4L5Q5VV16 416 aaPredicted RBP5.31□□□□□ -1.56
PTPN13-209ENST00000511467 TBC1D9BQ66K14 1250 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 NSUN6Q8TEA1 469 aaKnown RBP5.31□□□□□ -1.56
PTPN13-209ENST00000511467 FOXD4L4Q8WXT5 416 aaPredicted RBP5.31□□□□□ -1.56
PTPN13-209ENST00000511467 TNIP3Q96KP6 325 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 MROH8Q9H579 483 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 PANK4Q9NVE7 773 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 HPCAL4Q9UM19 191 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 ROBO1Q9Y6N7 1651 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 RIC1Q4ADV7 1423 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 VWA3AA6NCI4 1184 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 RASGRF2O14827 1237 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 ZBTB5O15062 677 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 DCTN3O75935 186 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 SUN1O94901 812 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 RHOBTB3O94955 611 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 ATP1A3P13637 1013 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 CRKLP46109 303 aaKnown RBP5.31□□□□□ -1.56
PTPN13-209ENST00000511467 ALDH1A3P47895 512 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 ELAVL2Q12926 359 aaKnown RBP5.31□□□□□ -1.56
PTPN13-209ENST00000511467 GKAP1Q5VSY0 366 aaPredicted RBP5.31□□□□□ -1.56
PTPN13-209ENST00000511467 CABP7Q86V35 215 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 GUF1Q8N442 669 aaKnown RBP5.31□□□□□ -1.56
PTPN13-209ENST00000511467 TDRD7Q8NHU6 1098 aaKnown RBP5.31□□□□□ -1.56
PTPN13-209ENST00000511467 PARK7Q99497 189 aaKnown RBP5.31□□□□□ -1.56
PTPN13-209ENST00000511467 ACTR5Q9H9F9 607 aaPredicted RBP5.31□□□□□ -1.56
PTPN13-209ENST00000511467 PCDHB15Q9Y5E8 787 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 AFPP02771 609 aaKnown RBP5.31□□□□□ -1.56
PTPN13-209ENST00000511467 EEF2P13639 858 aaKnown RBP5.31□□□□□ -1.56
PTPN13-209ENST00000511467 HK2P52789 917 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 PPP4CP60510 307 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 PRPF4BQ13523 1007 aaKnown RBP5.31□□□□□ -1.56
PTPN13-209ENST00000511467 FAM47CQ5HY64 1035 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 RPAINQ86UA6 219 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.31□□□□□ -1.56
PTPN13-209ENST00000511467 CES2O00748 559 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 NNMTP40261 264 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 KRT81Q14533 505 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 CEP55Q53EZ4 464 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 FAM26FQ5R3K3 315 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 ZNF746Q6NUN9 644 aaPredicted RBP5.31□□□□□ -1.56
PTPN13-209ENST00000511467 MYRIPQ8NFW9 859 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 NELFBQ8WX92 580 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 RMDN1Q96DB5 314 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 PRMT6Q96LA8 375 aaPredicted RBP5.31□□□□□ -1.56
PTPN13-209ENST00000511467 KDM4CQ9H3R0 1056 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 MLXIPQ9HAP2 919 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 KLHL14Q9P2G3 628 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 NRXN3Q9Y4C0 1643 aa5.3□□□□□ -1.56
PTPN13-209ENST00000511467 NRAPQ86VF7 1730 aa5.3□□□□□ -1.56
PTPN13-209ENST00000511467 ADGRA3Q8IWK6 1321 aa5.3□□□□□ -1.56
PTPN13-209ENST00000511467 IQANK1A0A1B0GTG1 560 aa5.3□□□□□ -1.56
PTPN13-209ENST00000511467 PYGBP11216 843 aa5.3□□□□□ -1.56
PTPN13-209ENST00000511467 PHEXP78562 749 aa5.3□□□□□ -1.56
PTPN13-209ENST00000511467 CAPRIN1Q14444 709 aaKnown RBP5.3□□□□□ -1.56
PTPN13-209ENST00000511467 ACAP1Q15027 740 aa5.3□□□□□ -1.56
PTPN13-209ENST00000511467 DCAF4L1Q3SXM0 396 aa5.3□□□□□ -1.56
PTPN13-209ENST00000511467 SYDE2Q5VT97 1194 aa5.3□□□□□ -1.56
PTPN13-209ENST00000511467 DAGLBQ8NCG7 672 aa5.3□□□□□ -1.56
PTPN13-209ENST00000511467 MRPL48Q96GC5 212 aaKnown RBP5.3□□□□□ -1.56
PTPN13-209ENST00000511467 TMEM237Q96Q45 408 aa5.3□□□□□ -1.56
PTPN13-209ENST00000511467 MRPL4Q9BYD3 311 aaKnown RBP5.3□□□□□ -1.56
PTPN13-209ENST00000511467 RETREG1Q9H6L5 497 aa5.3□□□□□ -1.56
PTPN13-209ENST00000511467 VIPAS39Q9H9C1 493 aa5.3□□□□□ -1.56
PTPN13-209ENST00000511467 DNAJC5BQ9UF47 199 aa5.3□□□□□ -1.56
PTPN13-209ENST00000511467 ZNF335Q9H4Z2 1342 aaPredicted RBP5.3□□□□□ -1.56
PTPN13-209ENST00000511467 H7C1W4 665 aa5.3□□□□□ -1.56
PTPN13-209ENST00000511467 PAPOLAP51003 745 aaKnown RBP5.3□□□□□ -1.56
PTPN13-209ENST00000511467 ZNF75DP51815 510 aa5.3□□□□□ -1.56
PTPN13-209ENST00000511467 CDK17Q00537 523 aa5.3□□□□□ -1.56
PTPN13-209ENST00000511467 STXBP2Q15833 593 aa5.3□□□□□ -1.56
PTPN13-209ENST00000511467 E2F4Q16254 413 aa5.3□□□□□ -1.56
PTPN13-209ENST00000511467 TSPAN17Q96FV3 270 aa5.3□□□□□ -1.56
PTPN13-209ENST00000511467 TRIM54Q9BYV2 358 aa5.3□□□□□ -1.56
PTPN13-209ENST00000511467 SLITRK6Q9H5Y7 841 aa5.3□□□□□ -1.56
PTPN13-209ENST00000511467 FAM50BQ9Y247 325 aa5.3□□□□□ -1.56
PTPN13-209ENST00000511467 DOCK1Q14185 1865 aa5.3□□□□□ -1.56
PTPN13-209ENST00000511467 FGF19O95750 216 aa5.3□□□□□ -1.56
PTPN13-209ENST00000511467 CNTFP26441 200 aa5.3□□□□□ -1.56
PTPN13-209ENST00000511467 PSMD6Q15008 389 aa5.3□□□□□ -1.56
PTPN13-209ENST00000511467 LONRF3Q496Y0 759 aa5.3□□□□□ -1.56
PTPN13-209ENST00000511467 ANKRD20A4Q4UJ75 823 aa5.3□□□□□ -1.56
PTPN13-209ENST00000511467 ANKRD20A2Q5SQ80 823 aa5.3□□□□□ -1.56
PTPN13-209ENST00000511467 ANKRD20A1Q5TYW2 823 aa5.3□□□□□ -1.56
PTPN13-209ENST00000511467 ANKRD20A3Q5VUR7 823 aa5.3□□□□□ -1.56
PTPN13-209ENST00000511467 LRRC31Q6UY01 552 aa5.3□□□□□ -1.56
PTPN13-209ENST00000511467 C15orf52Q6ZUT6 534 aaKnown RBP5.3□□□□□ -1.56
PTPN13-209ENST00000511467 ZDHHC17Q8IUH5 632 aa5.3□□□□□ -1.56
PTPN13-209ENST00000511467 ENGASEQ8NFI3 743 aa5.3□□□□□ -1.56
PTPN13-209ENST00000511467 BEST2Q8NFU1 509 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms