RNA–Protein interactions for RNA: ENST00000511019.1

TRIO-217, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 430 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-217ENST00000511019 KCNH6Q9H252 994 aa9.45□□□□□ -0.9
TRIO-217ENST00000511019 ELAC1Q9H777 363 aaKnown RBP9.45□□□□□ -0.9
TRIO-217ENST00000511019 TMEM161AQ9NX61 479 aa9.45□□□□□ -0.9
TRIO-217ENST00000511019 CHD7Q9P2D1 2997 aa9.45□□□□□ -0.9
TRIO-217ENST00000511019 GABBR1Q9UBS5 961 aa9.45□□□□□ -0.9
TRIO-217ENST00000511019 MUTYHQ9UIF7 546 aa9.45□□□□□ -0.9
TRIO-217ENST00000511019 SAMM50Q9Y512 469 aa9.45□□□□□ -0.9
TRIO-217ENST00000511019 ESYT2A0FGR8 921 aa9.44□□□□□ -0.9
TRIO-217ENST00000511019 FSD2A1L4K1 749 aa9.44□□□□□ -0.9
TRIO-217ENST00000511019 ZBTB42B2RXF5 422 aa9.44□□□□□ -0.9
TRIO-217ENST00000511019 GPR32O75388 356 aa9.44□□□□□ -0.9
TRIO-217ENST00000511019 CDC45O75419 566 aa9.44□□□□□ -0.9
TRIO-217ENST00000511019 C22orf31O95567 290 aa9.44□□□□□ -0.9
TRIO-217ENST00000511019 VTNP04004 478 aa9.44□□□□□ -0.9
TRIO-217ENST00000511019 NLRP11P59045 1033 aaKnown RBP9.44□□□□□ -0.9
TRIO-217ENST00000511019 ERVFC1P60507 584 aa9.44□□□□□ -0.9
TRIO-217ENST00000511019 SETQ01105 290 aaPredicted RBP9.44□□□□□ -0.9
TRIO-217ENST00000511019 KRT17Q04695 432 aa9.44□□□□□ -0.9
TRIO-217ENST00000511019 APOBRQ0VD83 1088 aa9.44□□□□□ -0.9
TRIO-217ENST00000511019 Q6ZUG5 572 aa9.44□□□□□ -0.9
TRIO-217ENST00000511019 CENPQQ7L2Z9 268 aaPredicted RBP9.44□□□□□ -0.9
TRIO-217ENST00000511019 FAM228AQ86W67 206 aa9.44□□□□□ -0.9
TRIO-217ENST00000511019 REXO1Q8N1G1 1221 aaKnown RBP9.44□□□□□ -0.9
TRIO-217ENST00000511019 ZNF710Q8N1W2 664 aa9.44□□□□□ -0.9
TRIO-217ENST00000511019 BICD2Q8TD16 824 aa9.44□□□□□ -0.9
TRIO-217ENST00000511019 FAM167AQ96KS9 214 aa9.44□□□□□ -0.9
TRIO-217ENST00000511019 PPP1R16BQ96T49 567 aa9.44□□□□□ -0.9
TRIO-217ENST00000511019 CDCA3Q99618 268 aaPredicted RBP9.44□□□□□ -0.9
TRIO-217ENST00000511019 OSMRQ99650 979 aa9.44□□□□□ -0.9
TRIO-217ENST00000511019 TLR9Q9NR96 1032 aa9.44□□□□□ -0.9
TRIO-217ENST00000511019 KAT6AQ92794 2004 aa9.44□□□□□ -0.9
TRIO-217ENST00000511019 MUC3AQ02505 3323 aa9.43□□□□□ -0.9
TRIO-217ENST00000511019 LOC730098B7Z3J9 87 aa9.43□□□□□ -0.9
TRIO-217ENST00000511019 ADAMTS3O15072 1205 aa9.43□□□□□ -0.9
TRIO-217ENST00000511019 HOXA2O43364 376 aa9.43□□□□□ -0.9
TRIO-217ENST00000511019 SRGAP2BP0DMP2 458 aa9.43□□□□□ -0.9
TRIO-217ENST00000511019 FGFR1P11362 822 aa9.43□□□□□ -0.9
TRIO-217ENST00000511019 CPA1P15085 419 aa9.43□□□□□ -0.9
TRIO-217ENST00000511019 LAG3P18627 525 aa9.43□□□□□ -0.9
TRIO-217ENST00000511019 EIF4BP23588 611 aaKnown RBP9.43□□□□□ -0.9
TRIO-217ENST00000511019 CIITAP33076 1130 aa9.43□□□□□ -0.9
TRIO-217ENST00000511019 USP11P51784 963 aa9.43□□□□□ -0.9
TRIO-217ENST00000511019 PLCB3Q01970 1234 aa9.43□□□□□ -0.9
TRIO-217ENST00000511019 DSC3Q14574 896 aa9.43□□□□□ -0.9
TRIO-217ENST00000511019 PKN1Q16512 942 aa9.43□□□□□ -0.9
TRIO-217ENST00000511019 DUSP6Q16828 381 aa9.43□□□□□ -0.9
TRIO-217ENST00000511019 BLOC1S2Q6QNY1 142 aa9.43□□□□□ -0.9
TRIO-217ENST00000511019 HFE2Q6ZVN8 426 aa9.43□□□□□ -0.9
TRIO-217ENST00000511019 BMP8AQ7Z5Y6 402 aa9.43□□□□□ -0.9
TRIO-217ENST00000511019 SKAP1Q86WV1 359 aa9.43□□□□□ -0.9
TRIO-217ENST00000511019 ABI1Q8IZP0 508 aa9.43□□□□□ -0.9
TRIO-217ENST00000511019 COLGALT1Q8NBJ5 622 aa9.43□□□□□ -0.9
TRIO-217ENST00000511019 SMRP1Q8NCR6 262 aa9.43□□□□□ -0.9
TRIO-217ENST00000511019 MRPS27Q92552 414 aaKnown RBP9.43□□□□□ -0.9
TRIO-217ENST00000511019 BRF1Q92994 677 aa9.43□□□□□ -0.9
TRIO-217ENST00000511019 RPGRIP1Q96KN7 1286 aa9.43□□□□□ -0.9
TRIO-217ENST00000511019 FBXL18Q96ME1 805 aa9.43□□□□□ -0.9
TRIO-217ENST00000511019 MAP7D2Q96T17 732 aa9.43□□□□□ -0.9
TRIO-217ENST00000511019 PHF7Q9BWX1 381 aaPredicted RBP9.43□□□□□ -0.9
TRIO-217ENST00000511019 TMEM117Q9H0C3 514 aa9.43□□□□□ -0.9
TRIO-217ENST00000511019 CWH43Q9H720 699 aa9.43□□□□□ -0.9
TRIO-217ENST00000511019 RTN4Q9NQC3 1192 aaKnown RBP9.43□□□□□ -0.9
TRIO-217ENST00000511019 BARX2Q9UMQ3 279 aaPredicted RBP9.43□□□□□ -0.9
TRIO-217ENST00000511019 AKT3Q9Y243 479 aa9.43□□□□□ -0.9
TRIO-217ENST00000511019 LZTS1Q9Y250 596 aa9.43□□□□□ -0.9
TRIO-217ENST00000511019 USP15Q9Y4E8 981 aaPredicted RBP9.43□□□□□ -0.9
TRIO-217ENST00000511019 PCDHGC5Q9Y5F6 944 aa9.43□□□□□ -0.9
TRIO-217ENST00000511019 TTC3P53804 2025 aa9.43□□□□□ -0.9
TRIO-217ENST00000511019 RALGAPA2Q2PPJ7 1873 aa9.42□□□□□ -0.9
TRIO-217ENST00000511019 WDR64B1ANS9 1081 aa9.42□□□□□ -0.9
TRIO-217ENST00000511019 GLP2RO95838 553 aa9.42□□□□□ -0.9
TRIO-217ENST00000511019 CLCN3P51790 818 aa9.42□□□□□ -0.9
TRIO-217ENST00000511019 NLRP5P59047 1200 aa9.42□□□□□ -0.9
TRIO-217ENST00000511019 CDC42EP1Q00587 391 aa9.42□□□□□ -0.9
TRIO-217ENST00000511019 KCNT2Q6UVM3 1135 aa9.42□□□□□ -0.9
TRIO-217ENST00000511019 TMEM184AQ6ZMB5 413 aa9.42□□□□□ -0.9
TRIO-217ENST00000511019 TRIM67Q6ZTA4 783 aa9.42□□□□□ -0.9
TRIO-217ENST00000511019 CCDC148Q8NFR7 591 aa9.42□□□□□ -0.9
TRIO-217ENST00000511019 KCNB2Q92953 911 aa9.42□□□□□ -0.9
TRIO-217ENST00000511019 PHKBQ93100 1093 aa9.42□□□□□ -0.9
TRIO-217ENST00000511019 PBXIP1Q96AQ6 731 aa9.42□□□□□ -0.9
TRIO-217ENST00000511019 CCDC136Q96JN2 1154 aa9.42□□□□□ -0.9
TRIO-217ENST00000511019 JAKMIP1Q96N16 626 aaKnown RBP9.42□□□□□ -0.9
TRIO-217ENST00000511019 ZNF558Q96NG5 402 aa9.42□□□□□ -0.9
TRIO-217ENST00000511019 CASD1Q96PB1 797 aa9.42□□□□□ -0.9
TRIO-217ENST00000511019 RIT2Q99578 217 aa9.42□□□□□ -0.9
TRIO-217ENST00000511019 TCF25Q9BQ70 676 aa9.42□□□□□ -0.9
TRIO-217ENST00000511019 RNF26Q9BY78 433 aaPredicted RBP9.42□□□□□ -0.9
TRIO-217ENST00000511019 ADAMTS10Q9H324 1103 aa9.42□□□□□ -0.9
TRIO-217ENST00000511019 NGRNQ9NPE2 291 aaKnown RBP9.42□□□□□ -0.9
TRIO-217ENST00000511019 DISC1Q9NRI5 854 aa9.42□□□□□ -0.9
TRIO-217ENST00000511019 XIRP2A4UGR9 3374 aa9.42□□□□□ -0.9
TRIO-217ENST00000511019 NLRC5Q86WI3 1866 aa9.41□□□□□ -0.9
TRIO-217ENST00000511019 FSCN2O14926 492 aa9.41□□□□□ -0.9
TRIO-217ENST00000511019 GAS7O60861 476 aa9.41□□□□□ -0.9
TRIO-217ENST00000511019 EOMESO95936 686 aa9.41□□□□□ -0.9
TRIO-217ENST00000511019 OATP04181 439 aa9.41□□□□□ -0.9
TRIO-217ENST00000511019 ATF7P17544 494 aaPredicted RBP9.41□□□□□ -0.9
TRIO-217ENST00000511019 PSMA5P28066 241 aa9.41□□□□□ -0.9
TRIO-217ENST00000511019 SFNP31947 248 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms