RNA–Protein interactions for RNA: ENST00000509903.5

CAST-228, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-228ENST00000509903 TNFRSF10BO14763 440 aa8.25□□□□□ -1.09
CAST-228ENST00000509903 MEIS2O14770 477 aa8.25□□□□□ -1.09
CAST-228ENST00000509903 SRGAP2O75044 1071 aa8.25□□□□□ -1.09
CAST-228ENST00000509903 TACC1O75410 805 aa8.25□□□□□ -1.09
CAST-228ENST00000509903 EIF3JO75822 258 aaKnown RBP8.25□□□□□ -1.09
CAST-228ENST00000509903 GNA14O95837 355 aa8.25□□□□□ -1.09
CAST-228ENST00000509903 NDUFB10O96000 172 aa8.25□□□□□ -1.09
CAST-228ENST00000509903 FOSP01100 380 aaPredicted RBP8.25□□□□□ -1.09
CAST-228ENST00000509903 CYP3A7P24462 503 aa8.25□□□□□ -1.09
CAST-228ENST00000509903 EIF4A3P38919 411 aaKnown RBP8.25□□□□□ -1.09
CAST-228ENST00000509903 STAT3P40763 770 aa8.25□□□□□ -1.09
CAST-228ENST00000509903 EPS15P42566 896 aa8.25□□□□□ -1.09
CAST-228ENST00000509903 VSNL1P62760 191 aa8.25□□□□□ -1.09
CAST-228ENST00000509903 ARID5AQ03989 594 aa8.25□□□□□ -1.09
CAST-228ENST00000509903 ZCWPW2Q504Y3 356 aa8.25□□□□□ -1.09
CAST-228ENST00000509903 TDRD12Q587J7 1177 aaKnown RBP8.25□□□□□ -1.09
CAST-228ENST00000509903 BEND6Q5SZJ8 279 aaPredicted RBP8.25□□□□□ -1.09
CAST-228ENST00000509903 SYDE2Q5VT97 1194 aa8.25□□□□□ -1.09
CAST-228ENST00000509903 IQCEQ6IPM2 695 aa8.25□□□□□ -1.09
CAST-228ENST00000509903 TATDN1Q6P1N9 297 aa8.25□□□□□ -1.09
CAST-228ENST00000509903 TXLNBQ8N3L3 684 aa8.25□□□□□ -1.09
CAST-228ENST00000509903 GMCL1P1Q8NEA9 526 aa8.25□□□□□ -1.09
CAST-228ENST00000509903 TRIM58Q8NG06 486 aa8.25□□□□□ -1.09
CAST-228ENST00000509903 SMCR8Q8TEV9 937 aaPredicted RBP8.25□□□□□ -1.09
CAST-228ENST00000509903 RPGRIP1Q96KN7 1286 aa8.25□□□□□ -1.09
CAST-228ENST00000509903 CEP63Q96MT8 703 aa8.25□□□□□ -1.09
CAST-228ENST00000509903 ALS2CR12Q96Q35 445 aa8.25□□□□□ -1.09
CAST-228ENST00000509903 EDEM3Q9BZQ6 932 aa8.25□□□□□ -1.09
CAST-228ENST00000509903 TSPAN10Q9H1Z9 355 aaPredicted RBP8.25□□□□□ -1.09
CAST-228ENST00000509903 SRA1Q9HD15 236 aaKnown RBP8.25□□□□□ -1.09
CAST-228ENST00000509903 ARHGAP20Q9P2F6 1191 aa8.25□□□□□ -1.09
CAST-228ENST00000509903 PCDHA13Q9Y5I0 950 aa8.25□□□□□ -1.09
CAST-228ENST00000509903 DUSP10Q9Y6W6 482 aa8.25□□□□□ -1.09
CAST-228ENST00000509903 SIPA1L1O43166 1804 aa8.25□□□□□ -1.09
CAST-228ENST00000509903 hCG_2014768A0A024R1R8 64 aa8.25□□□□□ -1.09
CAST-228ENST00000509903 NPHP3-ACAD11A0A0J9YXS1 232 aa8.25□□□□□ -1.09
CAST-228ENST00000509903 PLSCR1O15162 318 aa8.25□□□□□ -1.09
CAST-228ENST00000509903 MED24O75448 989 aa8.25□□□□□ -1.09
CAST-228ENST00000509903 GH2P01242 217 aa8.25□□□□□ -1.09
CAST-228ENST00000509903 BMP3P12645 472 aa8.25□□□□□ -1.09
CAST-228ENST00000509903 CYP11B2P19099 503 aa8.25□□□□□ -1.09
CAST-228ENST00000509903 MCM3P25205 808 aa8.25□□□□□ -1.09
CAST-228ENST00000509903 SNAP25P60880 206 aa8.25□□□□□ -1.09
CAST-228ENST00000509903 PDXDC1Q6P996 788 aa8.25□□□□□ -1.09
CAST-228ENST00000509903 POTEGQ6S5H5 508 aa8.25□□□□□ -1.09
CAST-228ENST00000509903 FAM160A2Q8N612 972 aaPredicted RBP8.25□□□□□ -1.09
CAST-228ENST00000509903 GMCL1Q96IK5 515 aa8.25□□□□□ -1.09
CAST-228ENST00000509903 MBOAT7Q96N66 472 aa8.25□□□□□ -1.09
CAST-228ENST00000509903 MMS19Q96T76 1030 aa8.25□□□□□ -1.09
CAST-228ENST00000509903 FAM129BQ96TA1 746 aa8.25□□□□□ -1.09
CAST-228ENST00000509903 TDRD3Q9H7E2 651 aaKnown RBP8.25□□□□□ -1.09
CAST-228ENST00000509903 ABCB6Q9NP58 842 aa8.25□□□□□ -1.09
CAST-228ENST00000509903 RGS17Q9UGC6 210 aaPredicted RBP8.25□□□□□ -1.09
CAST-228ENST00000509903 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.25□□□□□ -1.09
CAST-228ENST00000509903 PITPNM2Q9BZ72 1349 aa8.25□□□□□ -1.09
CAST-228ENST00000509903 SCN9AQ15858 1988 aa8.25□□□□□ -1.09
CAST-228ENST00000509903 MAP2K7O14733 419 aa8.24□□□□□ -1.09
CAST-228ENST00000509903 ZNF263O14978 683 aa8.24□□□□□ -1.09
CAST-228ENST00000509903 TBX3O15119 743 aa8.24□□□□□ -1.09
CAST-228ENST00000509903 MAGEA1P43355 309 aa8.24□□□□□ -1.09
CAST-228ENST00000509903 AOC3Q16853 763 aa8.24□□□□□ -1.09
CAST-228ENST00000509903 COX20Q5RI15 118 aa8.24□□□□□ -1.09
CAST-228ENST00000509903 STYK1Q6J9G0 422 aa8.24□□□□□ -1.09
CAST-228ENST00000509903 ARHGAP27Q6ZUM4 889 aa8.24□□□□□ -1.09
CAST-228ENST00000509903 SIAH1Q8IUQ4 282 aa8.24□□□□□ -1.09
CAST-228ENST00000509903 CCDC155Q8N6L0 562 aa8.24□□□□□ -1.09
CAST-228ENST00000509903 ETNPPLQ8TBG4 499 aa8.24□□□□□ -1.09
CAST-228ENST00000509903 BAP1Q92560 729 aa8.24□□□□□ -1.09
CAST-228ENST00000509903 PKNOX2Q96KN3 472 aa8.24□□□□□ -1.09
CAST-228ENST00000509903 CSRNP1Q96S65 589 aa8.24□□□□□ -1.09
CAST-228ENST00000509903 FGFBP2Q9BYJ0 223 aa8.24□□□□□ -1.09
CAST-228ENST00000509903 UBXN6Q9BZV1 441 aa8.24□□□□□ -1.09
CAST-228ENST00000509903 NUCKS1Q9H1E3 243 aaKnown RBP8.24□□□□□ -1.09
CAST-228ENST00000509903 SH2D4AQ9H788 454 aa8.24□□□□□ -1.09
CAST-228ENST00000509903 NLRC4Q9NPP4 1024 aa8.24□□□□□ -1.09
CAST-228ENST00000509903 TMOD2Q9NZR1 351 aa8.24□□□□□ -1.09
CAST-228ENST00000509903 CEP72Q9P209 647 aa8.24□□□□□ -1.09
CAST-228ENST00000509903 LRFN2Q9ULH4 789 aa8.24□□□□□ -1.09
CAST-228ENST00000509903 DNM3Q9UQ16 869 aa8.24□□□□□ -1.09
CAST-228ENST00000509903 JRKLQ9Y4A0 524 aa8.24□□□□□ -1.09
CAST-228ENST00000509903 LOC102724159A0A0B4J2E5 919 aa8.24□□□□□ -1.09
CAST-228ENST00000509903 CETN3O15182 167 aa8.24□□□□□ -1.09
CAST-228ENST00000509903 ENTPD3O75355 529 aa8.24□□□□□ -1.09
CAST-228ENST00000509903 SREBF1P36956 1147 aa8.24□□□□□ -1.09
CAST-228ENST00000509903 USP14P54578 494 aa8.24□□□□□ -1.09
CAST-228ENST00000509903 SLC12A3P55017 1021 aa8.24□□□□□ -1.09
CAST-228ENST00000509903 PABPC4Q13310 644 aaKnown RBP eCLIP8.24□□□□□ -1.09
CAST-228ENST00000509903 ADAM9Q13443 819 aa8.24□□□□□ -1.09
CAST-228ENST00000509903 PWP2Q15269 919 aaKnown RBP8.24□□□□□ -1.09
CAST-228ENST00000509903 MAP9Q49MG5 647 aa8.24□□□□□ -1.09
CAST-228ENST00000509903 SLC9C1Q4G0N8 1177 aa8.24□□□□□ -1.09
CAST-228ENST00000509903 Q4G0T1 1027 aa8.24□□□□□ -1.09
CAST-228ENST00000509903 SFMBT2Q5VUG0 894 aa8.24□□□□□ -1.09
CAST-228ENST00000509903 CC2D2BQ6DHV5 1058 aa8.24□□□□□ -1.09
CAST-228ENST00000509903 CCDC70Q6NSX1 233 aa8.24□□□□□ -1.09
CAST-228ENST00000509903 WDR93Q6P2C0 686 aa8.24□□□□□ -1.09
CAST-228ENST00000509903 CATSPER3Q86XQ3 398 aa8.24□□□□□ -1.09
CAST-228ENST00000509903 SCFD1Q8WVM8 642 aa8.24□□□□□ -1.09
CAST-228ENST00000509903 FAM20AQ96MK3 541 aa8.24□□□□□ -1.09
CAST-228ENST00000509903 LSM14BQ9BX40 385 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms