RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 BMPR1AP36894 532 aa20.21■□□□□ 0.83
TPM3-220ENST00000509601 CLCN3P51790 818 aa20.21■□□□□ 0.83
TPM3-220ENST00000509601 ST3GAL1Q11201 340 aa20.21■□□□□ 0.83
TPM3-220ENST00000509601 FAM43BQ6ZT52 329 aaPredicted RBP20.21■□□□□ 0.83
TPM3-220ENST00000509601 LRRC71Q8N4P6 559 aa20.21■□□□□ 0.83
TPM3-220ENST00000509601 WASF1Q92558 559 aa20.21■□□□□ 0.83
TPM3-220ENST00000509601 HAS1Q92839 578 aa20.21■□□□□ 0.83
TPM3-220ENST00000509601 CLP1Q92989 425 aaKnown RBP20.21■□□□□ 0.83
TPM3-220ENST00000509601 TNFRSF25Q93038 417 aa20.21■□□□□ 0.83
TPM3-220ENST00000509601 OSMRQ99650 979 aa20.21■□□□□ 0.83
TPM3-220ENST00000509601 ADAMTS10Q9H324 1103 aa20.21■□□□□ 0.83
TPM3-220ENST00000509601 COL4A4P53420 1690 aaPredicted RBP20.21■□□□□ 0.83
TPM3-220ENST00000509601 FAM205CA6NFA0 338 aa20.2■□□□□ 0.82
TPM3-220ENST00000509601 C5orf67F2Z3F1 127 aa20.2■□□□□ 0.82
TPM3-220ENST00000509601 JAK2O60674 1132 aa20.2■□□□□ 0.82
TPM3-220ENST00000509601 RB1P06400 928 aa20.2■□□□□ 0.82
TPM3-220ENST00000509601 NR5A1Q13285 461 aa20.2■□□□□ 0.82
TPM3-220ENST00000509601 FAM228AQ86W67 206 aa20.2■□□□□ 0.82
TPM3-220ENST00000509601 NPAS4Q8IUM7 802 aa20.2■□□□□ 0.82
TPM3-220ENST00000509601 HLA-CQ95604 372 aa20.2■□□□□ 0.82
TPM3-220ENST00000509601 MRPL38Q96DV4 380 aaKnown RBP20.2■□□□□ 0.82
TPM3-220ENST00000509601 FAM20AQ96MK3 541 aa20.2■□□□□ 0.82
TPM3-220ENST00000509601 VAV3Q9UKW4 847 aa20.2■□□□□ 0.82
TPM3-220ENST00000509601 ADGRA3Q8IWK6 1321 aa20.2■□□□□ 0.82
TPM3-220ENST00000509601 TMEM150BA6NC51 233 aa20.19■□□□□ 0.82
TPM3-220ENST00000509601 GPR182O15218 404 aa20.19■□□□□ 0.82
TPM3-220ENST00000509601 CCNT1O60563 726 aaKnown RBP20.19■□□□□ 0.82
TPM3-220ENST00000509601 KCNQ1P51787 676 aa20.19■□□□□ 0.82
TPM3-220ENST00000509601 NLRP11P59045 1033 aaKnown RBP20.19■□□□□ 0.82
TPM3-220ENST00000509601 FAM189BP81408 668 aa20.19■□□□□ 0.82
TPM3-220ENST00000509601 BTG3Q14201 252 aaPredicted RBP20.19■□□□□ 0.82
TPM3-220ENST00000509601 XKR3Q5GH77 459 aa20.19■□□□□ 0.82
TPM3-220ENST00000509601 ADAM2Q99965 735 aa20.19■□□□□ 0.82
TPM3-220ENST00000509601 RGS18Q9NS28 235 aa20.19■□□□□ 0.82
TPM3-220ENST00000509601 TCF20Q9UGU0 1960 aaKnown RBP20.19■□□□□ 0.82
TPM3-220ENST00000509601 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.18■□□□□ 0.82
TPM3-220ENST00000509601 IGKV6-21A0A0C4DH24 114 aa20.18■□□□□ 0.82
TPM3-220ENST00000509601 STAG3L1P0CL83 205 aa20.18■□□□□ 0.82
TPM3-220ENST00000509601 GCFC2P16383 781 aaKnown RBP20.18■□□□□ 0.82
TPM3-220ENST00000509601 TMOD1P28289 359 aa20.18■□□□□ 0.82
TPM3-220ENST00000509601 SARSP49591 514 aaKnown RBP20.18■□□□□ 0.82
TPM3-220ENST00000509601 GATMP50440 423 aa20.18■□□□□ 0.82
TPM3-220ENST00000509601 PPP2R5CQ13362 524 aa20.18■□□□□ 0.82
TPM3-220ENST00000509601 DRP2Q13474 957 aa20.18■□□□□ 0.82
TPM3-220ENST00000509601 DSC3Q14574 896 aa20.18■□□□□ 0.82
TPM3-220ENST00000509601 BANK1Q8NDB2 785 aa20.18■□□□□ 0.82
TPM3-220ENST00000509601 ADAMTS19Q8TE59 1207 aa20.18■□□□□ 0.82
TPM3-220ENST00000509601 SH2D3AQ9BRG2 576 aa20.18■□□□□ 0.82
TPM3-220ENST00000509601 AKT3Q9Y243 479 aa20.18■□□□□ 0.82
TPM3-220ENST00000509601 MRPL42Q9Y6G3 142 aaKnown RBP20.18■□□□□ 0.82
TPM3-220ENST00000509601 DDX11L8A8MPP1 907 aa20.17■□□□□ 0.82
TPM3-220ENST00000509601 C9IYK1 514 aa20.17■□□□□ 0.82
TPM3-220ENST00000509601 TBX3O15119 743 aa20.17■□□□□ 0.82
TPM3-220ENST00000509601 CTNNB1P35222 781 aa20.17■□□□□ 0.82
TPM3-220ENST00000509601 KRT2P35908 639 aa20.17■□□□□ 0.82
TPM3-220ENST00000509601 AAK1Q2M2I8 961 aa20.17■□□□□ 0.82
TPM3-220ENST00000509601 C8orf34Q49A92 452 aa20.17■□□□□ 0.82
TPM3-220ENST00000509601 MTERF2Q49AM1 385 aa20.17■□□□□ 0.82
TPM3-220ENST00000509601 ODR4Q5SWX8 454 aa20.17■□□□□ 0.82
TPM3-220ENST00000509601 SLC24A5Q71RS6 500 aa20.17■□□□□ 0.82
TPM3-220ENST00000509601 ANO5Q75V66 913 aa20.17■□□□□ 0.82
TPM3-220ENST00000509601 CMTR2Q8IYT2 770 aaKnown RBP20.17■□□□□ 0.82
TPM3-220ENST00000509601 ZNF668Q96K58 619 aaPredicted RBP20.17■□□□□ 0.82
TPM3-220ENST00000509601 KIF2CQ99661 725 aa20.17■□□□□ 0.82
TPM3-220ENST00000509601 NLRC5Q86WI3 1866 aa20.17■□□□□ 0.82
TPM3-220ENST00000509601 BTBD18B2RXH4 712 aa20.16■□□□□ 0.82
TPM3-220ENST00000509601 GRM6O15303 877 aa20.16■□□□□ 0.82
TPM3-220ENST00000509601 EIF4BP23588 611 aaKnown RBP20.16■□□□□ 0.82
TPM3-220ENST00000509601 GPC3P51654 580 aa20.16■□□□□ 0.82
TPM3-220ENST00000509601 PSMC5P62195 406 aa20.16■□□□□ 0.82
TPM3-220ENST00000509601 TBC1D8BQ0IIM8 1120 aa20.16■□□□□ 0.82
TPM3-220ENST00000509601 PTPROQ16827 1216 aa20.16■□□□□ 0.82
TPM3-220ENST00000509601 POTEDQ86YR6 584 aa20.16■□□□□ 0.82
TPM3-220ENST00000509601 ZNF710Q8N1W2 664 aa20.16■□□□□ 0.82
TPM3-220ENST00000509601 MAP7D2Q96T17 732 aa20.16■□□□□ 0.82
TPM3-220ENST00000509601 NAP1L4Q99733 375 aaKnown RBP20.16■□□□□ 0.82
TPM3-220ENST00000509601 C1orf112Q9NSG2 853 aa20.16■□□□□ 0.82
TPM3-220ENST00000509601 SEPT9Q9UHD8 586 aaPredicted RBP20.16■□□□□ 0.82
TPM3-220ENST00000509601 RWDD3Q9Y3V2 267 aa20.16■□□□□ 0.82
TPM3-220ENST00000509601 PCDHB7Q9Y5E2 793 aa20.16■□□□□ 0.82
TPM3-220ENST00000509601 MAFO75444 373 aaPredicted RBP20.15■□□□□ 0.82
TPM3-220ENST00000509601 MMP1P03956 469 aa20.15■□□□□ 0.82
TPM3-220ENST00000509601 SPIRE1Q08AE8 756 aa20.15■□□□□ 0.82
TPM3-220ENST00000509601 FAM102BQ5T8I3 360 aa20.15■□□□□ 0.82
TPM3-220ENST00000509601 WRAP73Q9P2S5 460 aaPredicted RBP20.15■□□□□ 0.82
TPM3-220ENST00000509601 LRFN2Q9ULH4 789 aa20.15■□□□□ 0.82
TPM3-220ENST00000509601 LIMCH1Q9UPQ0 1083 aa20.15■□□□□ 0.82
TPM3-220ENST00000509601 RALGAPA2Q2PPJ7 1873 aa20.15■□□□□ 0.82
TPM3-220ENST00000509601 DENND3A2RUS2 1198 aa20.14■□□□□ 0.81
TPM3-220ENST00000509601 TNFRSF10AO00220 468 aa20.14■□□□□ 0.81
TPM3-220ENST00000509601 WNT7AO00755 349 aa20.14■□□□□ 0.81
TPM3-220ENST00000509601 P4HBP07237 508 aaKnown RBP20.14■□□□□ 0.81
TPM3-220ENST00000509601 DARSP14868 501 aaKnown RBP20.14■□□□□ 0.81
TPM3-220ENST00000509601 QARSP47897 775 aaKnown RBP20.14■□□□□ 0.81
TPM3-220ENST00000509601 CAMK1Q14012 370 aa20.14■□□□□ 0.81
TPM3-220ENST00000509601 EPHA7Q15375 998 aa20.14■□□□□ 0.81
TPM3-220ENST00000509601 PAN2Q504Q3 1202 aaKnown RBP20.14■□□□□ 0.81
TPM3-220ENST00000509601 DIS3L2Q8IYB7 885 aaKnown RBP20.14■□□□□ 0.81
TPM3-220ENST00000509601 ZNF579Q8NAF0 562 aaKnown RBP20.14■□□□□ 0.81
TPM3-220ENST00000509601 NECAB3Q96P71 396 aaPredicted RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms