RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 SPPL3Q8TCT6 385 aa14.12□□□□□ -0.15
PDPN-208ENST00000509009 P2RX5Q93086 422 aa14.12□□□□□ -0.15
PDPN-208ENST00000509009 MBOAT7Q96N66 472 aa14.12□□□□□ -0.15
PDPN-208ENST00000509009 PPP1R16BQ96T49 567 aa14.12□□□□□ -0.15
PDPN-208ENST00000509009 OSMRQ99650 979 aa14.12□□□□□ -0.15
PDPN-208ENST00000509009 TEKT3Q9BXF9 490 aa14.12□□□□□ -0.15
PDPN-208ENST00000509009 ADAMTS10Q9H324 1103 aa14.12□□□□□ -0.15
PDPN-208ENST00000509009 EPHX3Q9H6B9 360 aa14.12□□□□□ -0.15
PDPN-208ENST00000509009 EVPLQ92817 2033 aa14.12□□□□□ -0.15
PDPN-208ENST00000509009 TDP2O95551 362 aa14.11□□□□□ -0.15
PDPN-208ENST00000509009 OATP04181 439 aa14.11□□□□□ -0.15
PDPN-208ENST00000509009 ITGB1P05556 798 aa14.11□□□□□ -0.15
PDPN-208ENST00000509009 NEFLP07196 543 aa14.11□□□□□ -0.15
PDPN-208ENST00000509009 COL9A1P20849 921 aa14.11□□□□□ -0.15
PDPN-208ENST00000509009 IBSPP21815 317 aaPredicted RBP14.11□□□□□ -0.15
PDPN-208ENST00000509009 DNAJB1P25685 340 aa14.11□□□□□ -0.15
PDPN-208ENST00000509009 LTBRP36941 435 aa14.11□□□□□ -0.15
PDPN-208ENST00000509009 CLCN3P51790 818 aa14.11□□□□□ -0.15
PDPN-208ENST00000509009 JAK3P52333 1124 aa14.11□□□□□ -0.15
PDPN-208ENST00000509009 NLRP11P59045 1033 aaKnown RBP14.11□□□□□ -0.15
PDPN-208ENST00000509009 DSC3Q14574 896 aa14.11□□□□□ -0.15
PDPN-208ENST00000509009 UGCGQ16739 394 aa14.11□□□□□ -0.15
PDPN-208ENST00000509009 CTC1Q2NKJ3 1217 aa14.11□□□□□ -0.15
PDPN-208ENST00000509009 PUS10Q3MIT2 529 aaKnown RBP14.11□□□□□ -0.15
PDPN-208ENST00000509009 B3GNT9Q6UX72 402 aa14.11□□□□□ -0.15
PDPN-208ENST00000509009 KLHL23Q8NBE8 558 aa14.11□□□□□ -0.15
PDPN-208ENST00000509009 KHSRPQ92945 711 aaKnown RBP eCLIP14.11□□□□□ -0.15
PDPN-208ENST00000509009 C1orf112Q9NSG2 853 aa14.11□□□□□ -0.15
PDPN-208ENST00000509009 DENND3A2RUS2 1198 aa14.1□□□□□ -0.15
PDPN-208ENST00000509009 CHMP2AO43633 222 aa14.1□□□□□ -0.15
PDPN-208ENST00000509009 STBD1O95210 358 aa14.1□□□□□ -0.15
PDPN-208ENST00000509009 MMP1P03956 469 aa14.1□□□□□ -0.15
PDPN-208ENST00000509009 IL9P15248 144 aa14.1□□□□□ -0.15
PDPN-208ENST00000509009 TMOD1P28289 359 aa14.1□□□□□ -0.15
PDPN-208ENST00000509009 PRKCEQ02156 737 aa14.1□□□□□ -0.15
PDPN-208ENST00000509009 SCRN1Q12765 414 aa14.1□□□□□ -0.15
PDPN-208ENST00000509009 HYAL1Q12794 435 aa14.1□□□□□ -0.15
PDPN-208ENST00000509009 TARBP2Q15633 366 aaKnown RBP14.1□□□□□ -0.15
PDPN-208ENST00000509009 FAM102BQ5T8I3 360 aa14.1□□□□□ -0.15
PDPN-208ENST00000509009 MOXD1Q6UVY6 613 aa14.1□□□□□ -0.15
PDPN-208ENST00000509009 EP400NLQ6ZTU2 488 aa14.1□□□□□ -0.15
PDPN-208ENST00000509009 MIER3Q7Z3K6 550 aa14.1□□□□□ -0.15
PDPN-208ENST00000509009 ZNF710Q8N1W2 664 aa14.1□□□□□ -0.15
PDPN-208ENST00000509009 LRRC71Q8N4P6 559 aa14.1□□□□□ -0.15
PDPN-208ENST00000509009 RDM1Q8NG50 284 aa14.1□□□□□ -0.15
PDPN-208ENST00000509009 C1QTNF1Q9BXJ1 281 aa14.1□□□□□ -0.15
PDPN-208ENST00000509009 NIFKQ9BYG3 293 aaKnown RBP14.1□□□□□ -0.15
PDPN-208ENST00000509009 RNF216Q9NWF9 866 aaPredicted RBP14.1□□□□□ -0.15
PDPN-208ENST00000509009 PPP4R2Q9NY27 417 aa14.1□□□□□ -0.15
PDPN-208ENST00000509009 CLDND1Q9NY35 253 aa14.1□□□□□ -0.15
PDPN-208ENST00000509009 TPCN1Q9ULQ1 816 aa14.1□□□□□ -0.15
PDPN-208ENST00000509009 KCNJ14Q9UNX9 436 aa14.1□□□□□ -0.15
PDPN-208ENST00000509009 AKT3Q9Y243 479 aa14.1□□□□□ -0.15
PDPN-208ENST00000509009 LOXHD1Q8IVV2 1947 aa14.09□□□□□ -0.15
PDPN-208ENST00000509009 MYH9P35579 1960 aaKnown RBP14.09□□□□□ -0.15
PDPN-208ENST00000509009 PFKFB2O60825 505 aa14.09□□□□□ -0.15
PDPN-208ENST00000509009 DTNBO60941 627 aa14.09□□□□□ -0.15
PDPN-208ENST00000509009 EIF4BP23588 611 aaKnown RBP14.09□□□□□ -0.15
PDPN-208ENST00000509009 GTF2F1P35269 517 aaKnown RBP eCLIP14.09□□□□□ -0.15
PDPN-208ENST00000509009 NONOQ15233 471 aaKnown RBP eCLIP14.09□□□□□ -0.15
PDPN-208ENST00000509009 INF2Q27J81 1249 aa14.09□□□□□ -0.15
PDPN-208ENST00000509009 KRT25Q7Z3Z0 450 aa14.09□□□□□ -0.15
PDPN-208ENST00000509009 ETNPPLQ8TBG4 499 aa14.09□□□□□ -0.15
PDPN-208ENST00000509009 CEP89Q96ST8 783 aa14.09□□□□□ -0.15
PDPN-208ENST00000509009 MAP7D2Q96T17 732 aa14.09□□□□□ -0.15
PDPN-208ENST00000509009 PHF20Q9BVI0 1012 aa14.09□□□□□ -0.15
PDPN-208ENST00000509009 SLKQ9H2G2 1235 aaPredicted RBP14.09□□□□□ -0.15
PDPN-208ENST00000509009 IGFLR1Q9H665 355 aa14.09□□□□□ -0.15
PDPN-208ENST00000509009 TYW1Q9NV66 732 aaKnown RBP14.09□□□□□ -0.15
PDPN-208ENST00000509009 NLRC5Q86WI3 1866 aa14.08□□□□□ -0.16
PDPN-208ENST00000509009 TBKBP1A7MCY6 615 aa14.08□□□□□ -0.16
PDPN-208ENST00000509009 DLX2Q07687 328 aaPredicted RBP14.08□□□□□ -0.16
PDPN-208ENST00000509009 ADAM15Q13444 863 aa14.08□□□□□ -0.16
PDPN-208ENST00000509009 XKR3Q5GH77 459 aa14.08□□□□□ -0.16
PDPN-208ENST00000509009 GJD3Q8N144 294 aa14.08□□□□□ -0.16
PDPN-208ENST00000509009 POF1BQ8WVV4 589 aa14.08□□□□□ -0.16
PDPN-208ENST00000509009 ZNF668Q96K58 619 aaPredicted RBP14.08□□□□□ -0.16
PDPN-208ENST00000509009 ELAC1Q9H777 363 aaKnown RBP14.08□□□□□ -0.16
PDPN-208ENST00000509009 ATP6V0A4Q9HBG4 840 aa14.08□□□□□ -0.16
PDPN-208ENST00000509009 GJB4Q9NTQ9 266 aa14.08□□□□□ -0.16
PDPN-208ENST00000509009 TMEM161AQ9NX61 479 aa14.08□□□□□ -0.16
PDPN-208ENST00000509009 DDX25Q9UHL0 483 aaKnown RBP14.08□□□□□ -0.16
PDPN-208ENST00000509009 RAPGEFL1Q9UHV5 662 aa14.08□□□□□ -0.16
PDPN-208ENST00000509009 RALGAPA2Q2PPJ7 1873 aa14.08□□□□□ -0.16
PDPN-208ENST00000509009 TMEM150BA6NC51 233 aa14.07□□□□□ -0.16
PDPN-208ENST00000509009 DDX11L8A8MPP1 907 aa14.07□□□□□ -0.16
PDPN-208ENST00000509009 PI4K2BG5E9Z4 385 aa14.07□□□□□ -0.16
PDPN-208ENST00000509009 CDKL5O76039 1030 aa14.07□□□□□ -0.16
PDPN-208ENST00000509009 CSPG5O95196 566 aa14.07□□□□□ -0.16
PDPN-208ENST00000509009 CTDNEP1O95476 244 aa14.07□□□□□ -0.16
PDPN-208ENST00000509009 DARSP14868 501 aaKnown RBP14.07□□□□□ -0.16
PDPN-208ENST00000509009 ZSCAN20P17040 1043 aaPredicted RBP14.07□□□□□ -0.16
PDPN-208ENST00000509009 IRS1P35568 1242 aa14.07□□□□□ -0.16
PDPN-208ENST00000509009 GPC3P51654 580 aa14.07□□□□□ -0.16
PDPN-208ENST00000509009 ANAPC15P60006 121 aa14.07□□□□□ -0.16
PDPN-208ENST00000509009 TBC1D8BQ0IIM8 1120 aa14.07□□□□□ -0.16
PDPN-208ENST00000509009 LETM2Q2VYF4 491 aa14.07□□□□□ -0.16
PDPN-208ENST00000509009 FAM20AQ96MK3 541 aa14.07□□□□□ -0.16
PDPN-208ENST00000509009 CWH43Q9H720 699 aa14.07□□□□□ -0.16
PDPN-208ENST00000509009 PCDHB12Q9Y5F1 795 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms