RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 TCEAL5Q5H9L2 206 aa18.31■□□□□ 0.52
LMNA-222ENST00000508500 LRRC71Q8N4P6 559 aa18.31■□□□□ 0.52
LMNA-222ENST00000508500 METTL13Q8N6R0 699 aa18.31■□□□□ 0.52
LMNA-222ENST00000508500 BANK1Q8NDB2 785 aa18.31■□□□□ 0.52
LMNA-222ENST00000508500 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.31■□□□□ 0.52
LMNA-222ENST00000508500 OXER1Q8TDS5 423 aa18.31■□□□□ 0.52
LMNA-222ENST00000508500 CEP89Q96ST8 783 aa18.31■□□□□ 0.52
LMNA-222ENST00000508500 C22orf23Q9BZE7 217 aa18.31■□□□□ 0.52
LMNA-222ENST00000508500 C5orf42Q9H799 3197 aa18.3■□□□□ 0.52
LMNA-222ENST00000508500 STK36Q9NRP7 1315 aa18.3■□□□□ 0.52
LMNA-222ENST00000508500 TMEM150BA6NC51 233 aa18.3■□□□□ 0.52
LMNA-222ENST00000508500 SLC37A4O43826 429 aa18.3■□□□□ 0.52
LMNA-222ENST00000508500 SEC24BO95487 1268 aa18.3■□□□□ 0.52
LMNA-222ENST00000508500 FDPSP14324 419 aaKnown RBP18.3■□□□□ 0.52
LMNA-222ENST00000508500 SARSP49591 514 aaKnown RBP18.3■□□□□ 0.52
LMNA-222ENST00000508500 CRYBB1P53674 252 aaPredicted RBP18.3■□□□□ 0.52
LMNA-222ENST00000508500 ANAPC15P60006 121 aa18.3■□□□□ 0.52
LMNA-222ENST00000508500 TARBP2Q15633 366 aaKnown RBP18.3■□□□□ 0.52
LMNA-222ENST00000508500 PTPROQ16827 1216 aa18.3■□□□□ 0.52
LMNA-222ENST00000508500 LEXMQ3ZCV2 418 aa18.3■□□□□ 0.52
LMNA-222ENST00000508500 EARS2Q5JPH6 523 aaKnown RBP18.3■□□□□ 0.52
LMNA-222ENST00000508500 GALNT17Q6IS24 598 aa18.3■□□□□ 0.52
LMNA-222ENST00000508500 EFCAB12Q6NXP0 572 aa18.3■□□□□ 0.52
LMNA-222ENST00000508500 CPLX2Q6PUV4 134 aaKnown RBP18.3■□□□□ 0.52
LMNA-222ENST00000508500 MOXD1Q6UVY6 613 aa18.3■□□□□ 0.52
LMNA-222ENST00000508500 CMTR2Q8IYT2 770 aaKnown RBP18.3■□□□□ 0.52
LMNA-222ENST00000508500 FAM177A1Q8N128 213 aaPredicted RBP18.3■□□□□ 0.52
LMNA-222ENST00000508500 SLKQ9H2G2 1235 aaPredicted RBP18.3■□□□□ 0.52
LMNA-222ENST00000508500 ADAMTS10Q9H324 1103 aa18.3■□□□□ 0.52
LMNA-222ENST00000508500 RGS18Q9NS28 235 aa18.3■□□□□ 0.52
LMNA-222ENST00000508500 TCEAL9Q9UHQ7 104 aa18.3■□□□□ 0.52
LMNA-222ENST00000508500 CEP131Q9UPN4 1083 aa18.3■□□□□ 0.52
LMNA-222ENST00000508500 C9IYK1 514 aa18.29■□□□□ 0.52
LMNA-222ENST00000508500 PI4K2BG5E9Z4 385 aa18.29■□□□□ 0.52
LMNA-222ENST00000508500 MAGEB2O15479 319 aa18.29■□□□□ 0.52
LMNA-222ENST00000508500 GPR37L1O60883 481 aa18.29■□□□□ 0.52
LMNA-222ENST00000508500 KCNA5P22460 613 aa18.29■□□□□ 0.52
LMNA-222ENST00000508500 DNAJB1P25685 340 aa18.29■□□□□ 0.52
LMNA-222ENST00000508500 SFNP31947 248 aa18.29■□□□□ 0.52
LMNA-222ENST00000508500 JAK3P52333 1124 aa18.29■□□□□ 0.52
LMNA-222ENST00000508500 DSC3Q14574 896 aa18.29■□□□□ 0.52
LMNA-222ENST00000508500 NONOQ15233 471 aaKnown RBP eCLIP18.29■□□□□ 0.52
LMNA-222ENST00000508500 PAN2Q504Q3 1202 aaKnown RBP18.29■□□□□ 0.52
LMNA-222ENST00000508500 MIER3Q7Z3K6 550 aa18.29■□□□□ 0.52
LMNA-222ENST00000508500 ZNF668Q96K58 619 aaPredicted RBP18.29■□□□□ 0.52
LMNA-222ENST00000508500 FAM167AQ96KS9 214 aa18.29■□□□□ 0.52
LMNA-222ENST00000508500 ADAM2Q99965 735 aa18.29■□□□□ 0.52
LMNA-222ENST00000508500 SH2D3AQ9BRG2 576 aa18.29■□□□□ 0.52
LMNA-222ENST00000508500 ALG13Q9NP73 1137 aaKnown RBP18.29■□□□□ 0.52
LMNA-222ENST00000508500 RWDD3Q9Y3V2 267 aa18.29■□□□□ 0.52
LMNA-222ENST00000508500 EML1O00423 815 aa18.28■□□□□ 0.52
LMNA-222ENST00000508500 STAG3L1P0CL83 205 aa18.28■□□□□ 0.52
LMNA-222ENST00000508500 NLRP11P59045 1033 aaKnown RBP18.28■□□□□ 0.52
LMNA-222ENST00000508500 DRP2Q13474 957 aa18.28■□□□□ 0.52
LMNA-222ENST00000508500 ME3Q16798 604 aa18.28■□□□□ 0.52
LMNA-222ENST00000508500 TIGD5Q53EQ6 642 aa18.28■□□□□ 0.52
LMNA-222ENST00000508500 FAM102BQ5T8I3 360 aa18.28■□□□□ 0.52
LMNA-222ENST00000508500 KRT25Q7Z3Z0 450 aa18.28■□□□□ 0.52
LMNA-222ENST00000508500 FAM178BQ8IXR5 827 aa18.28■□□□□ 0.52
LMNA-222ENST00000508500 NECAB1Q8N987 351 aa18.28■□□□□ 0.52
LMNA-222ENST00000508500 NEK9Q8TD19 979 aa18.28■□□□□ 0.52
LMNA-222ENST00000508500 NSUN3Q9H649 340 aaKnown RBP18.28■□□□□ 0.52
LMNA-222ENST00000508500 NRBP2Q9NSY0 501 aa18.28■□□□□ 0.52
LMNA-222ENST00000508500 HCSTQ9UBK5 93 aa18.28■□□□□ 0.52
LMNA-222ENST00000508500 DDX25Q9UHL0 483 aaKnown RBP18.28■□□□□ 0.52
LMNA-222ENST00000508500 PLAGL2Q9UPG8 496 aa18.28■□□□□ 0.52
LMNA-222ENST00000508500 FAM205CA6NFA0 338 aa18.27■□□□□ 0.52
LMNA-222ENST00000508500 GPR182O15218 404 aa18.27■□□□□ 0.52
LMNA-222ENST00000508500 ITGB1P05556 798 aa18.27■□□□□ 0.52
LMNA-222ENST00000508500 IBSPP21815 317 aaPredicted RBP18.27■□□□□ 0.52
LMNA-222ENST00000508500 HOXD11P31277 338 aaPredicted RBP18.27■□□□□ 0.52
LMNA-222ENST00000508500 LTBRP36941 435 aa18.27■□□□□ 0.52
LMNA-222ENST00000508500 FAM189BP81408 668 aa18.27■□□□□ 0.52
LMNA-222ENST00000508500 LETM2Q2VYF4 491 aa18.27■□□□□ 0.52
LMNA-222ENST00000508500 SLC24A5Q71RS6 500 aa18.27■□□□□ 0.52
LMNA-222ENST00000508500 RDM1Q8NG50 284 aa18.27■□□□□ 0.52
LMNA-222ENST00000508500 P2RX5Q93086 422 aa18.27■□□□□ 0.52
LMNA-222ENST00000508500 C11orf84Q9BUA3 381 aaPredicted RBP18.27■□□□□ 0.52
LMNA-222ENST00000508500 PLVAPQ9BX97 442 aa18.27■□□□□ 0.52
LMNA-222ENST00000508500 NIFKQ9BYG3 293 aaKnown RBP18.27■□□□□ 0.52
LMNA-222ENST00000508500 LMAN2LQ9H0V9 348 aa18.27■□□□□ 0.52
LMNA-222ENST00000508500 KCNMB3Q9NPA1 279 aa18.27■□□□□ 0.52
LMNA-222ENST00000508500 AKT3Q9Y243 479 aa18.27■□□□□ 0.52
LMNA-222ENST00000508500 CDKL5O76039 1030 aa18.26■□□□□ 0.51
LMNA-222ENST00000508500 MMP1P03956 469 aa18.26■□□□□ 0.51
LMNA-222ENST00000508500 IL9P15248 144 aa18.26■□□□□ 0.51
LMNA-222ENST00000508500 GTF2F1P35269 517 aaKnown RBP eCLIP18.26■□□□□ 0.51
LMNA-222ENST00000508500 GPC3P51654 580 aa18.26■□□□□ 0.51
LMNA-222ENST00000508500 ST3GAL1Q11201 340 aa18.26■□□□□ 0.51
LMNA-222ENST00000508500 HYAL1Q12794 435 aa18.26■□□□□ 0.51
LMNA-222ENST00000508500 KLHL23Q8NBE8 558 aa18.26■□□□□ 0.51
LMNA-222ENST00000508500 SPPL3Q8TCT6 385 aa18.26■□□□□ 0.51
LMNA-222ENST00000508500 HAS1Q92839 578 aa18.26■□□□□ 0.51
LMNA-222ENST00000508500 PABPC5Q96DU9 382 aaKnown RBP18.26■□□□□ 0.51
LMNA-222ENST00000508500 C1orf112Q9NSG2 853 aa18.26■□□□□ 0.51
LMNA-222ENST00000508500 RNF19AQ9NV58 838 aa18.26■□□□□ 0.51
LMNA-222ENST00000508500 VAV3Q9UKW4 847 aa18.26■□□□□ 0.51
LMNA-222ENST00000508500 PCDHB7Q9Y5E2 793 aa18.26■□□□□ 0.51
LMNA-222ENST00000508500 IGKV6-21A0A0C4DH24 114 aa18.25■□□□□ 0.51
LMNA-222ENST00000508500 DENND3A2RUS2 1198 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms