RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 CNNM3Q8NE01 707 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 SCFD2Q8WU76 684 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 LEO1Q8WVC0 666 aaPredicted RBP3.23□□□□□ -1.89
NEDD4-208ENST00000508342 JAKMIP2Q96AA8 810 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 ZNF668Q96K58 619 aaPredicted RBP3.23□□□□□ -1.89
NEDD4-208ENST00000508342 ABHD16BQ9H3Z7 469 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 ZCCHC17Q9NP64 241 aaKnown RBP3.23□□□□□ -1.89
NEDD4-208ENST00000508342 GOLGA6AQ9NYA3 693 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 ERAP1Q9NZ08 941 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 TNKSO95271 1327 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 SYNGAP1Q96PV0 1343 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 GPR75-ASB3A0A0A6YYF3 556 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 GOLGA8CPA6NN73 597 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 ATP2A1O14983 1001 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 ZBTB5O15062 677 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 MMP3P08254 477 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 PIK3CAP42336 1068 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 ALDH5A1P51649 535 aaPredicted RBP3.23□□□□□ -1.89
NEDD4-208ENST00000508342 NUBP1P53384 320 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 KRT76Q01546 638 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 KRT33BQ14525 404 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 CCL14Q16627 93 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 MAP7D1Q3KQU3 841 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 PREPLQ4J6C6 727 aaPredicted RBP3.23□□□□□ -1.89
NEDD4-208ENST00000508342 RRAGBQ5VZM2 374 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 DSCC1Q9BVC3 393 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 ZSCAN16Q9H4T2 348 aaPredicted RBP3.23□□□□□ -1.89
NEDD4-208ENST00000508342 SUCLA2Q9P2R7 463 aaPredicted RBP3.23□□□□□ -1.89
NEDD4-208ENST00000508342 NCDNQ9UBB6 729 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 PGAP2Q9UHJ9 254 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 GMEB2Q9UKD1 530 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 TTLL3Q9Y4R7 772 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 ADAMTSL1Q8N6G6 1762 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 H0YCG3 227 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 SLC27A2O14975 620 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 CRCPO75575 148 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 GGPS1O95749 300 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 BMP15O95972 392 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 TCF7P36402 384 aaPredicted RBP3.23□□□□□ -1.89
NEDD4-208ENST00000508342 TECP42680 631 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 TRIM28Q13263 835 aaKnown RBP3.23□□□□□ -1.89
NEDD4-208ENST00000508342 FKBP1CQ5VVH2 108 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 TMC7Q7Z402 723 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 ZNF654Q8IZM8 581 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 BRI3BPQ8WY22 251 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 MAML1Q92585 1016 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 TMEM169Q96HH4 297 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 TBATAQ96M53 351 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 MOV10L1Q9BXT6 1211 aaKnown RBP3.23□□□□□ -1.89
NEDD4-208ENST00000508342 IFIH1Q9BYX4 1025 aaKnown RBP3.23□□□□□ -1.89
NEDD4-208ENST00000508342 WBP1LQ9NX94 342 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 PDE4DIPQ5VU43 2346 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 CASP8AP2Q9UKL3 1982 aa3.23□□□□□ -1.89
NEDD4-208ENST00000508342 SPTLC1O15269 473 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 PFKMP08237 780 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 CYP2C9P11712 490 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 PSMA3P25788 255 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 BRD3Q15059 726 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 CYP4A22Q5TCH4 519 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 ICE2Q659A1 982 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 LMBRD2Q68DH5 695 aaPredicted RBP3.22□□□□□ -1.89
NEDD4-208ENST00000508342 EFCAB12Q6NXP0 572 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 GLB1LQ6UWU2 654 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 ANKLE1Q8NAG6 615 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 COL3A1P02461 1466 aaPredicted RBP3.22□□□□□ -1.89
NEDD4-208ENST00000508342 E7EWF7 191 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 VWA5AO00534 786 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 CAPN9O14815 690 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 CKBP12277 381 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 NFKBIAP25963 317 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 GRIK1P39086 918 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 CD151P48509 253 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 SATB1Q01826 763 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 CACNB2Q08289 660 aaPredicted RBP3.22□□□□□ -1.89
NEDD4-208ENST00000508342 RARS2Q5T160 578 aaKnown RBP3.22□□□□□ -1.89
NEDD4-208ENST00000508342 CXCL17Q6UXB2 119 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 SV2BQ7L1I2 683 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 SPDYE1Q8NFV5 336 aaPredicted RBP3.22□□□□□ -1.89
NEDD4-208ENST00000508342 TMC2Q8TDI7 906 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 ARHGAP39Q9C0H5 1083 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 KIAA1683Q9H0B3 1180 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 CSRNP2Q9H175 543 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 CAPN10Q9HC96 672 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 DCP1AQ9NPI6 582 aaPredicted RBP3.22□□□□□ -1.89
NEDD4-208ENST00000508342 PXMP2Q9NR77 195 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 TMEM260Q9NX78 707 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 MKL2Q9ULH7 1088 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 SALL1Q9NSC2 1324 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 STK10O94804 968 aaKnown RBP3.22□□□□□ -1.89
NEDD4-208ENST00000508342 KIAA0754O94854 1291 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 KRT10P13645 584 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 GJC1P36383 396 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 CYP4A11Q02928 519 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 AASDHQ4L235 1098 aaPredicted RBP3.22□□□□□ -1.89
NEDD4-208ENST00000508342 PDXDC1Q6P996 788 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 RUFY3Q7L099 469 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 RSRC2Q7L4I2 434 aaKnown RBP3.22□□□□□ -1.89
NEDD4-208ENST00000508342 RNF214Q8ND24 703 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 GMCL1P1Q8NEA9 526 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 DNERQ8NFT8 737 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms