RNA–Protein interactions for RNA: ENST00000507355.5

POLR2J3-212, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-212ENST00000507355 APOBRQ0VD83 1088 aa15.23■□□□□ 0.03
POLR2J3-212ENST00000507355 PAK2Q13177 524 aa15.23■□□□□ 0.03
POLR2J3-212ENST00000507355 PFKFB3Q16875 520 aaPredicted RBP15.23■□□□□ 0.03
POLR2J3-212ENST00000507355 TMEM266Q2M3C6 531 aa15.23■□□□□ 0.03
POLR2J3-212ENST00000507355 FAM160B1Q5W0V3 765 aa15.23■□□□□ 0.03
POLR2J3-212ENST00000507355 SWSAP1Q6NVH7 229 aa15.23■□□□□ 0.03
POLR2J3-212ENST00000507355 CCDC60Q8IWA6 550 aaPredicted RBP15.23■□□□□ 0.03
POLR2J3-212ENST00000507355 CDHR5Q9HBB8 845 aa15.23■□□□□ 0.03
POLR2J3-212ENST00000507355 LRFN2Q9ULH4 789 aa15.23■□□□□ 0.03
POLR2J3-212ENST00000507355 WDR87Q6ZQQ6 2873 aa15.22■□□□□ 0.03
POLR2J3-212ENST00000507355 DMDP11532 3685 aa15.22■□□□□ 0.03
POLR2J3-212ENST00000507355 KDM3AQ9Y4C1 1321 aa15.22■□□□□ 0.03
POLR2J3-212ENST00000507355 CYP3A4P08684 503 aa15.22■□□□□ 0.03
POLR2J3-212ENST00000507355 METAP2P50579 478 aaKnown RBP eCLIP15.22■□□□□ 0.03
POLR2J3-212ENST00000507355 RCAN1P53805 252 aa15.22■□□□□ 0.03
POLR2J3-212ENST00000507355 NFX1Q12986 1120 aaKnown RBP15.22■□□□□ 0.03
POLR2J3-212ENST00000507355 PDXDC2PQ6P474 469 aa15.22■□□□□ 0.03
POLR2J3-212ENST00000507355 Q6ZUG5 572 aa15.22■□□□□ 0.03
POLR2J3-212ENST00000507355 KIAA0319LQ8IZA0 1049 aa15.22■□□□□ 0.03
POLR2J3-212ENST00000507355 ATP8B4Q8TF62 1192 aa15.22■□□□□ 0.03
POLR2J3-212ENST00000507355 CRYGNQ8WXF5 182 aa15.22■□□□□ 0.03
POLR2J3-212ENST00000507355 SUSD6Q92537 303 aa15.22■□□□□ 0.03
POLR2J3-212ENST00000507355 IRF2BPLQ9H1B7 796 aa15.22■□□□□ 0.03
POLR2J3-212ENST00000507355 TMX1Q9H3N1 280 aa15.22■□□□□ 0.03
POLR2J3-212ENST00000507355 ZNF302Q9NR11 478 aa15.22■□□□□ 0.03
POLR2J3-212ENST00000507355 GINS2Q9Y248 185 aa15.22■□□□□ 0.03
POLR2J3-212ENST00000507355 FAM186AA6NE01 2351 aa15.22■□□□□ 0.03
POLR2J3-212ENST00000507355 EVPLQ92817 2033 aa15.21■□□□□ 0.03
POLR2J3-212ENST00000507355 IGLV3-22A0A075B6J6 115 aa15.21■□□□□ 0.03
POLR2J3-212ENST00000507355 CCDC196A0A1B0GTZ2 297 aa15.21■□□□□ 0.03
POLR2J3-212ENST00000507355 IPO5O00410 1097 aaKnown RBP15.21■□□□□ 0.03
POLR2J3-212ENST00000507355 RPS6KA5O75582 802 aa15.21■□□□□ 0.03
POLR2J3-212ENST00000507355 ATF7P17544 494 aaPredicted RBP15.21■□□□□ 0.03
POLR2J3-212ENST00000507355 ATP4AP20648 1035 aa15.21■□□□□ 0.03
POLR2J3-212ENST00000507355 DUSP6Q16828 381 aa15.21■□□□□ 0.03
POLR2J3-212ENST00000507355 ZNF484Q5JVG2 852 aa15.21■□□□□ 0.03
POLR2J3-212ENST00000507355 MIS18BP1Q6P0N0 1132 aa15.21■□□□□ 0.03
POLR2J3-212ENST00000507355 LLGL2Q6P1M3 1020 aa15.21■□□□□ 0.03
POLR2J3-212ENST00000507355 BRF1Q92994 677 aa15.21■□□□□ 0.03
POLR2J3-212ENST00000507355 ZNF577Q9BSK1 485 aa15.21■□□□□ 0.03
POLR2J3-212ENST00000507355 ZMYND12Q9H0C1 365 aa15.21■□□□□ 0.03
POLR2J3-212ENST00000507355 C6orf50Q9HD87 102 aa15.21■□□□□ 0.03
POLR2J3-212ENST00000507355 TSHZ2Q9NRE2 1034 aa15.21■□□□□ 0.03
POLR2J3-212ENST00000507355 HCSTQ9UBK5 93 aa15.21■□□□□ 0.03
POLR2J3-212ENST00000507355 NOC2LQ9Y3T9 749 aaKnown RBP15.21■□□□□ 0.03
POLR2J3-212ENST00000507355 PCDHB12Q9Y5F1 795 aa15.21■□□□□ 0.03
POLR2J3-212ENST00000507355 CACNA1AO00555 2505 aa15.21■□□□□ 0.03
POLR2J3-212ENST00000507355 ESYT2A0FGR8 921 aa15.2■□□□□ 0.02
POLR2J3-212ENST00000507355 TBKBP1A7MCY6 615 aa15.2■□□□□ 0.02
POLR2J3-212ENST00000507355 PRPF3O43395 683 aaKnown RBP15.2■□□□□ 0.02
POLR2J3-212ENST00000507355 ABCB7O75027 752 aa15.2■□□□□ 0.02
POLR2J3-212ENST00000507355 TECP42680 631 aa15.2■□□□□ 0.02
POLR2J3-212ENST00000507355 ERVFC1P60507 584 aa15.2■□□□□ 0.02
POLR2J3-212ENST00000507355 PLPP4Q5VZY2 271 aa15.2■□□□□ 0.02
POLR2J3-212ENST00000507355 MCTP2Q6DN12 878 aa15.2■□□□□ 0.02
POLR2J3-212ENST00000507355 ASCL5Q7RTU5 278 aa15.2■□□□□ 0.02
POLR2J3-212ENST00000507355 TRMT1LQ7Z2T5 733 aaKnown RBP15.2■□□□□ 0.02
POLR2J3-212ENST00000507355 CKAP2LQ8IYA6 745 aa15.2■□□□□ 0.02
POLR2J3-212ENST00000507355 THNSL1Q8IYQ7 743 aa15.2■□□□□ 0.02
POLR2J3-212ENST00000507355 KCNB2Q92953 911 aa15.2■□□□□ 0.02
POLR2J3-212ENST00000507355 JAKMIP1Q96N16 626 aaKnown RBP15.2■□□□□ 0.02
POLR2J3-212ENST00000507355 ERVK-5Q9HDB9 667 aa15.2■□□□□ 0.02
POLR2J3-212ENST00000507355 TBC1D22BQ9NU19 505 aa15.2■□□□□ 0.02
POLR2J3-212ENST00000507355 PCDHB7Q9Y5E2 793 aa15.2■□□□□ 0.02
POLR2J3-212ENST00000507355 VPS13AQ96RL7 3174 aa15.2■□□□□ 0.02
POLR2J3-212ENST00000507355 COL1A2P08123 1366 aa15.2■□□□□ 0.02
POLR2J3-212ENST00000507355 FNDC1Q4ZHG4 1894 aaPredicted RBP15.2■□□□□ 0.02
POLR2J3-212ENST00000507355 ZBTB42B2RXF5 422 aa15.19■□□□□ 0.02
POLR2J3-212ENST00000507355 MGEA5O60502 916 aa15.19■□□□□ 0.02
POLR2J3-212ENST00000507355 FGF18O76093 207 aa15.19■□□□□ 0.02
POLR2J3-212ENST00000507355 SRGAP2BP0DMP2 458 aa15.19■□□□□ 0.02
POLR2J3-212ENST00000507355 SARSP49591 514 aaKnown RBP15.19■□□□□ 0.02
POLR2J3-212ENST00000507355 FOXK2Q01167 660 aa15.19■□□□□ 0.02
POLR2J3-212ENST00000507355 BLOC1S2Q6QNY1 142 aa15.19■□□□□ 0.02
POLR2J3-212ENST00000507355 REXO1Q8N1G1 1221 aaKnown RBP15.19■□□□□ 0.02
POLR2J3-212ENST00000507355 CCDC12Q8WUD4 166 aaPredicted RBP15.19■□□□□ 0.02
POLR2J3-212ENST00000507355 TMEM40Q8WWA1 233 aa15.19■□□□□ 0.02
POLR2J3-212ENST00000507355 PHKBQ93100 1093 aa15.19■□□□□ 0.02
POLR2J3-212ENST00000507355 RIPOR3Q96MK2 946 aa15.19■□□□□ 0.02
POLR2J3-212ENST00000507355 PPP1R16BQ96T49 567 aa15.19■□□□□ 0.02
POLR2J3-212ENST00000507355 CDCA3Q99618 268 aaPredicted RBP15.19■□□□□ 0.02
POLR2J3-212ENST00000507355 ADAM2Q99965 735 aa15.19■□□□□ 0.02
POLR2J3-212ENST00000507355 AAASQ9NRG9 546 aa15.19■□□□□ 0.02
POLR2J3-212ENST00000507355 ST3GAL5Q9UNP4 418 aa15.19■□□□□ 0.02
POLR2J3-212ENST00000507355 MAFBQ9Y5Q3 323 aaPredicted RBP15.19■□□□□ 0.02
POLR2J3-212ENST00000507355 SNX14Q9Y5W7 946 aa15.19■□□□□ 0.02
POLR2J3-212ENST00000507355 DENND3A2RUS2 1198 aa15.18■□□□□ 0.02
POLR2J3-212ENST00000507355 GPR182O15218 404 aa15.18■□□□□ 0.02
POLR2J3-212ENST00000507355 GALR2O43603 387 aaPredicted RBP15.18■□□□□ 0.02
POLR2J3-212ENST00000507355 GNA11P29992 359 aa15.18■□□□□ 0.02
POLR2J3-212ENST00000507355 HSPA4P34932 840 aa15.18■□□□□ 0.02
POLR2J3-212ENST00000507355 AKAP17AQ02040 695 aaKnown RBP15.18■□□□□ 0.02
POLR2J3-212ENST00000507355 UBE3AQ05086 875 aa15.18■□□□□ 0.02
POLR2J3-212ENST00000507355 KIZQ2M2Z5 673 aa15.18■□□□□ 0.02
POLR2J3-212ENST00000507355 PRR16Q569H4 304 aa15.18■□□□□ 0.02
POLR2J3-212ENST00000507355 ODR4Q5SWX8 454 aa15.18■□□□□ 0.02
POLR2J3-212ENST00000507355 FAM102BQ5T8I3 360 aa15.18■□□□□ 0.02
POLR2J3-212ENST00000507355 ZNF746Q6NUN9 644 aaPredicted RBP15.18■□□□□ 0.02
POLR2J3-212ENST00000507355 ANKRD54Q6NXT1 300 aa15.18■□□□□ 0.02
POLR2J3-212ENST00000507355 FAM43BQ6ZT52 329 aaPredicted RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms