RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 CEP131Q9UPN4 1083 aa13.06□□□□□ -0.32
HMGCS1-204ENST00000507293 TBKBP1A7MCY6 615 aa13.05□□□□□ -0.32
HMGCS1-204ENST00000507293 C9IYK1 514 aa13.05□□□□□ -0.32
HMGCS1-204ENST00000507293 MSH4O15457 936 aa13.05□□□□□ -0.32
HMGCS1-204ENST00000507293 MBTPS2O43462 519 aa13.05□□□□□ -0.32
HMGCS1-204ENST00000507293 GAS7O60861 476 aa13.05□□□□□ -0.32
HMGCS1-204ENST00000507293 GPR32O75388 356 aa13.05□□□□□ -0.32
HMGCS1-204ENST00000507293 OATP04181 439 aa13.05□□□□□ -0.32
HMGCS1-204ENST00000507293 PLA2G5P39877 138 aa13.05□□□□□ -0.32
HMGCS1-204ENST00000507293 NLRP5P59047 1200 aa13.05□□□□□ -0.32
HMGCS1-204ENST00000507293 TOB2Q14106 344 aaPredicted RBP13.05□□□□□ -0.32
HMGCS1-204ENST00000507293 UGCGQ16739 394 aa13.05□□□□□ -0.32
HMGCS1-204ENST00000507293 SPOUT1Q5T280 376 aaKnown RBP13.05□□□□□ -0.32
HMGCS1-204ENST00000507293 FAM102BQ5T8I3 360 aa13.05□□□□□ -0.32
HMGCS1-204ENST00000507293 FAM43BQ6ZT52 329 aaPredicted RBP13.05□□□□□ -0.32
HMGCS1-204ENST00000507293 SLC24A5Q71RS6 500 aa13.05□□□□□ -0.32
HMGCS1-204ENST00000507293 RUFY3Q7L099 469 aa13.05□□□□□ -0.32
HMGCS1-204ENST00000507293 LRRC71Q8N4P6 559 aa13.05□□□□□ -0.32
HMGCS1-204ENST00000507293 POF1BQ8WVV4 589 aa13.05□□□□□ -0.32
HMGCS1-204ENST00000507293 FAM122AQ96E09 287 aa13.05□□□□□ -0.32
HMGCS1-204ENST00000507293 SH3GLB2Q9NR46 395 aa13.05□□□□□ -0.32
HMGCS1-204ENST00000507293 HCSTQ9UBK5 93 aa13.05□□□□□ -0.32
HMGCS1-204ENST00000507293 PRKAG3Q9UGI9 489 aa13.05□□□□□ -0.32
HMGCS1-204ENST00000507293 HCN4Q9Y3Q4 1203 aa13.05□□□□□ -0.32
HMGCS1-204ENST00000507293 MAGEB2O15479 319 aa13.04□□□□□ -0.32
HMGCS1-204ENST00000507293 CHMP2AO43633 222 aa13.04□□□□□ -0.32
HMGCS1-204ENST00000507293 ZNF862O60290 1169 aa13.04□□□□□ -0.32
HMGCS1-204ENST00000507293 FGFR1P11362 822 aa13.04□□□□□ -0.32
HMGCS1-204ENST00000507293 NDUFV1P49821 464 aa13.04□□□□□ -0.32
HMGCS1-204ENST00000507293 PRKCEQ02156 737 aa13.04□□□□□ -0.32
HMGCS1-204ENST00000507293 ADAM15Q13444 863 aa13.04□□□□□ -0.32
HMGCS1-204ENST00000507293 SMAD4Q13485 552 aaKnown RBP13.04□□□□□ -0.32
HMGCS1-204ENST00000507293 DSC3Q14574 896 aa13.04□□□□□ -0.32
HMGCS1-204ENST00000507293 SMAD2Q15796 467 aaKnown RBP13.04□□□□□ -0.32
HMGCS1-204ENST00000507293 LRCH2Q5VUJ6 765 aa13.04□□□□□ -0.32
HMGCS1-204ENST00000507293 EFCAB12Q6NXP0 572 aa13.04□□□□□ -0.32
HMGCS1-204ENST00000507293 ADHFE1Q8IWW8 467 aa13.04□□□□□ -0.32
HMGCS1-204ENST00000507293 TRIM22Q8IYM9 498 aa13.04□□□□□ -0.32
HMGCS1-204ENST00000507293 LINC01465Q8N7H1 131 aa13.04□□□□□ -0.32
HMGCS1-204ENST00000507293 SLC5A5Q92911 643 aa13.04□□□□□ -0.32
HMGCS1-204ENST00000507293 GJA10Q969M2 543 aa13.04□□□□□ -0.32
HMGCS1-204ENST00000507293 PPP2R3CQ969Q6 453 aa13.04□□□□□ -0.32
HMGCS1-204ENST00000507293 MAP7D2Q96T17 732 aa13.04□□□□□ -0.32
HMGCS1-204ENST00000507293 RIT2Q99578 217 aa13.04□□□□□ -0.32
HMGCS1-204ENST00000507293 TEKT3Q9BXF9 490 aa13.04□□□□□ -0.32
HMGCS1-204ENST00000507293 UNC45AQ9H3U1 944 aa13.04□□□□□ -0.32
HMGCS1-204ENST00000507293 ZSWIM6Q9HCJ5 1215 aa13.04□□□□□ -0.32
HMGCS1-204ENST00000507293 DISC1Q9NRI5 854 aa13.04□□□□□ -0.32
HMGCS1-204ENST00000507293 RNF216Q9NWF9 866 aaPredicted RBP13.04□□□□□ -0.32
HMGCS1-204ENST00000507293 CD207Q9UJ71 328 aa13.04□□□□□ -0.32
HMGCS1-204ENST00000507293 AKT3Q9Y243 479 aa13.04□□□□□ -0.32
HMGCS1-204ENST00000507293 PCDHGC5Q9Y5F6 944 aa13.04□□□□□ -0.32
HMGCS1-204ENST00000507293 C19orf67A6NJJ6 358 aa13.03□□□□□ -0.32
HMGCS1-204ENST00000507293 ALADP13716 330 aa13.03□□□□□ -0.32
HMGCS1-204ENST00000507293 SFNP31947 248 aa13.03□□□□□ -0.32
HMGCS1-204ENST00000507293 NRIP1P48552 1158 aa13.03□□□□□ -0.32
HMGCS1-204ENST00000507293 USP11P51784 963 aa13.03□□□□□ -0.32
HMGCS1-204ENST00000507293 JAK3P52333 1124 aa13.03□□□□□ -0.32
HMGCS1-204ENST00000507293 NLRP11P59045 1033 aaKnown RBP13.03□□□□□ -0.32
HMGCS1-204ENST00000507293 SSRP1Q08945 709 aaKnown RBP13.03□□□□□ -0.32
HMGCS1-204ENST00000507293 EFHBQ8N7U6 833 aa13.03□□□□□ -0.32
HMGCS1-204ENST00000507293 TBCKQ8TEA7 893 aa13.03□□□□□ -0.32
HMGCS1-204ENST00000507293 ZNF668Q96K58 619 aaPredicted RBP13.03□□□□□ -0.32
HMGCS1-204ENST00000507293 LARP6Q9BRS8 491 aaKnown RBP13.03□□□□□ -0.32
HMGCS1-204ENST00000507293 ADAMTS10Q9H324 1103 aa13.03□□□□□ -0.32
HMGCS1-204ENST00000507293 ATP6V0A4Q9HBG4 840 aa13.03□□□□□ -0.32
HMGCS1-204ENST00000507293 AAASQ9NRG9 546 aa13.03□□□□□ -0.32
HMGCS1-204ENST00000507293 NRBP2Q9NSY0 501 aa13.03□□□□□ -0.32
HMGCS1-204ENST00000507293 TMEM161AQ9NX61 479 aa13.03□□□□□ -0.32
HMGCS1-204ENST00000507293 PCDHA4Q9UN74 947 aa13.03□□□□□ -0.32
HMGCS1-204ENST00000507293 PCDHB12Q9Y5F1 795 aa13.03□□□□□ -0.32
HMGCS1-204ENST00000507293 CYP46A1Q9Y6A2 500 aa13.03□□□□□ -0.32
HMGCS1-204ENST00000507293 CPLX1O14810 134 aa13.02□□□□□ -0.33
HMGCS1-204ENST00000507293 DCXO43602 365 aa13.02□□□□□ -0.33
HMGCS1-204ENST00000507293 FGF18O76093 207 aa13.02□□□□□ -0.33
HMGCS1-204ENST00000507293 TDP2O95551 362 aa13.02□□□□□ -0.33
HMGCS1-204ENST00000507293 TMOD1P28289 359 aa13.02□□□□□ -0.33
HMGCS1-204ENST00000507293 FAM189BP81408 668 aa13.02□□□□□ -0.33
HMGCS1-204ENST00000507293 RBM23Q86U06 439 aaKnown RBP13.02□□□□□ -0.33
HMGCS1-204ENST00000507293 THNSL1Q8IYQ7 743 aa13.02□□□□□ -0.33
HMGCS1-204ENST00000507293 COLGALT1Q8NBJ5 622 aa13.02□□□□□ -0.33
HMGCS1-204ENST00000507293 MSLNLQ96KJ4 702 aa13.02□□□□□ -0.33
HMGCS1-204ENST00000507293 SCLT1Q96NL6 688 aa13.02□□□□□ -0.33
HMGCS1-204ENST00000507293 C22orf23Q9BZE7 217 aa13.02□□□□□ -0.33
HMGCS1-204ENST00000507293 UPF3BQ9BZI7 483 aaKnown RBP13.02□□□□□ -0.33
HMGCS1-204ENST00000507293 CWH43Q9H720 699 aa13.02□□□□□ -0.33
HMGCS1-204ENST00000507293 ELAC1Q9H777 363 aaKnown RBP13.02□□□□□ -0.33
HMGCS1-204ENST00000507293 TYW1Q9NV66 732 aaKnown RBP13.02□□□□□ -0.33
HMGCS1-204ENST00000507293 CLEC1BQ9P126 229 aa13.02□□□□□ -0.33
HMGCS1-204ENST00000507293 ARID2Q68CP9 1835 aa13.02□□□□□ -0.33
HMGCS1-204ENST00000507293 PRR33A8MZF0 331 aa13.01□□□□□ -0.33
HMGCS1-204ENST00000507293 M0R2N6 131 aa13.01□□□□□ -0.33
HMGCS1-204ENST00000507293 EPB41L2O43491 1005 aaKnown RBP13.01□□□□□ -0.33
HMGCS1-204ENST00000507293 PSMD10O75832 226 aa13.01□□□□□ -0.33
HMGCS1-204ENST00000507293 DEXIO95424 95 aa13.01□□□□□ -0.33
HMGCS1-204ENST00000507293 GLP2RO95838 553 aa13.01□□□□□ -0.33
HMGCS1-204ENST00000507293 LAG3P18627 525 aa13.01□□□□□ -0.33
HMGCS1-204ENST00000507293 EIF4BP23588 611 aaKnown RBP13.01□□□□□ -0.33
HMGCS1-204ENST00000507293 GPC3P51654 580 aa13.01□□□□□ -0.33
HMGCS1-204ENST00000507293 UBE3AQ05086 875 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms