RNA–Protein interactions for RNA: ENST00000506847.5

SNX2-204, Transcript of sorting nexin 2, humanhuman

TSL 5

Gene SNX2, Length 798 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-204ENST00000506847 GPR158Q5T848 1215 aa6.98□□□□□ -1.29
SNX2-204ENST00000506847 CHTF18Q8WVB6 975 aa6.98□□□□□ -1.29
SNX2-204ENST00000506847 RPGRQ92834 1020 aaKnown RBP6.98□□□□□ -1.29
SNX2-204ENST00000506847 TUBGCP5Q96RT8 1024 aa6.98□□□□□ -1.29
SNX2-204ENST00000506847 CAAP1Q9H8G2 361 aa6.98□□□□□ -1.29
SNX2-204ENST00000506847 USP36Q9P275 1121 aaKnown RBP6.98□□□□□ -1.29
SNX2-204ENST00000506847 SLC4A7Q9Y6M7 1214 aa6.98□□□□□ -1.29
SNX2-204ENST00000506847 BCAR1P56945 870 aa6.97□□□□□ -1.29
SNX2-204ENST00000506847 TBC1D10BQ4KMP7 808 aaPredicted RBP6.97□□□□□ -1.29
SNX2-204ENST00000506847 PRAMEF9Q5VWM5 478 aa6.97□□□□□ -1.29
SNX2-204ENST00000506847 SLFN13Q68D06 897 aa6.97□□□□□ -1.29
SNX2-204ENST00000506847 GLB1LQ6UWU2 654 aa6.97□□□□□ -1.29
SNX2-204ENST00000506847 DDX46Q7L014 1031 aaKnown RBP6.97□□□□□ -1.29
SNX2-204ENST00000506847 GPR155Q7Z3F1 870 aa6.97□□□□□ -1.29
SNX2-204ENST00000506847 RTKN2Q8IZC4 609 aa6.97□□□□□ -1.29
SNX2-204ENST00000506847 CHAC2Q8WUX2 184 aa6.97□□□□□ -1.29
SNX2-204ENST00000506847 USP7Q93009 1102 aa6.97□□□□□ -1.29
SNX2-204ENST00000506847 SEC61A2Q9H9S3 476 aa6.97□□□□□ -1.29
SNX2-204ENST00000506847 ITGB3P05106 788 aa6.96□□□□□ -1.3
SNX2-204ENST00000506847 LSP1P33241 339 aa6.96□□□□□ -1.3
SNX2-204ENST00000506847 STAT3P40763 770 aa6.96□□□□□ -1.3
SNX2-204ENST00000506847 SESN2P58004 480 aaPredicted RBP6.96□□□□□ -1.3
SNX2-204ENST00000506847 PHC1P78364 1004 aa6.96□□□□□ -1.3
SNX2-204ENST00000506847 ZNF827Q17R98 1081 aa6.96□□□□□ -1.3
SNX2-204ENST00000506847 SKOR2Q2VWA4 1001 aaPredicted RBP6.96□□□□□ -1.3
SNX2-204ENST00000506847 ESRP1Q6NXG1 681 aaKnown RBP6.96□□□□□ -1.3
SNX2-204ENST00000506847 RNF180Q86T96 592 aa6.96□□□□□ -1.3
SNX2-204ENST00000506847 THNSL2Q86YJ6 484 aa6.96□□□□□ -1.3
SNX2-204ENST00000506847 GPR101Q96P66 508 aaPredicted RBP6.96□□□□□ -1.3
SNX2-204ENST00000506847 MSL2Q9HCI7 577 aa6.96□□□□□ -1.3
SNX2-204ENST00000506847 KCMF1Q9P0J7 381 aa6.96□□□□□ -1.3
SNX2-204ENST00000506847 H2AFY2Q9P0M6 372 aaPredicted RBP6.96□□□□□ -1.3
SNX2-204ENST00000506847 VWA7Q9Y334 891 aa6.96□□□□□ -1.3
SNX2-204ENST00000506847 NPEPPSL1A6NEC2 478 aa6.95□□□□□ -1.3
SNX2-204ENST00000506847 K7ESM1 405 aa6.95□□□□□ -1.3
SNX2-204ENST00000506847 FKBP9O95302 570 aa6.95□□□□□ -1.3
SNX2-204ENST00000506847 ZNF888P0CJ79 500 aaPredicted RBP6.95□□□□□ -1.3
SNX2-204ENST00000506847 CPEP16870 476 aa6.95□□□□□ -1.3
SNX2-204ENST00000506847 RGS3P49796 1198 aa6.95□□□□□ -1.3
SNX2-204ENST00000506847 SMAD3P84022 425 aaKnown RBP6.95□□□□□ -1.3
SNX2-204ENST00000506847 DGKDQ16760 1214 aa6.95□□□□□ -1.3
SNX2-204ENST00000506847 CT47A1Q5JQC4 288 aaPredicted RBP6.95□□□□□ -1.3
SNX2-204ENST00000506847 TRIM68Q6AZZ1 485 aa6.95□□□□□ -1.3
SNX2-204ENST00000506847 FKBP9P1Q75LS8 142 aa6.95□□□□□ -1.3
SNX2-204ENST00000506847 TTC1Q99614 292 aa6.95□□□□□ -1.3
SNX2-204ENST00000506847 ZMAT4Q9H898 229 aa6.95□□□□□ -1.3
SNX2-204ENST00000506847 SAE1Q9UBE0 346 aaPredicted RBP6.95□□□□□ -1.3
SNX2-204ENST00000506847 CDC42EP3Q9UKI2 254 aa6.95□□□□□ -1.3
SNX2-204ENST00000506847 ZEB2O60315 1214 aa6.94□□□□□ -1.3
SNX2-204ENST00000506847 ADCYAP1R1P41586 468 aa6.94□□□□□ -1.3
SNX2-204ENST00000506847 RRADP55042 308 aa6.94□□□□□ -1.3
SNX2-204ENST00000506847 ADCY2Q08462 1091 aa6.94□□□□□ -1.3
SNX2-204ENST00000506847 AGBL4Q5VU57 503 aa6.94□□□□□ -1.3
SNX2-204ENST00000506847 EGFLAMQ63HQ2 1017 aa6.94□□□□□ -1.3
SNX2-204ENST00000506847 ZNF610Q8N9Z0 462 aa6.94□□□□□ -1.3
SNX2-204ENST00000506847 OR5AN1Q8NGI8 311 aa6.94□□□□□ -1.3
SNX2-204ENST00000506847 LPPQ93052 612 aa6.94□□□□□ -1.3
SNX2-204ENST00000506847 OR10A2Q9H208 303 aa6.94□□□□□ -1.3
SNX2-204ENST00000506847 IFT22Q9H7X7 185 aa6.94□□□□□ -1.3
SNX2-204ENST00000506847 SYNPO2Q9UMS6 1093 aa6.94□□□□□ -1.3
SNX2-204ENST00000506847 RAB11FIP3O75154 756 aa6.93□□□□□ -1.3
SNX2-204ENST00000506847 H2AFYO75367 372 aaKnown RBP6.93□□□□□ -1.3
SNX2-204ENST00000506847 CNOT4O95628 575 aaKnown RBP6.93□□□□□ -1.3
SNX2-204ENST00000506847 MASP1P48740 699 aa6.93□□□□□ -1.3
SNX2-204ENST00000506847 RAC3P60763 192 aa6.93□□□□□ -1.3
SNX2-204ENST00000506847 NFYCQ13952 458 aa6.93□□□□□ -1.3
SNX2-204ENST00000506847 KIAA1841Q6NSI8 718 aa6.93□□□□□ -1.3
SNX2-204ENST00000506847 KLHDC10Q6PID8 442 aa6.93□□□□□ -1.3
SNX2-204ENST00000506847 ESPNLQ6ZVH7 1005 aa6.93□□□□□ -1.3
SNX2-204ENST00000506847 USP30Q70CQ3 517 aa6.93□□□□□ -1.3
SNX2-204ENST00000506847 BMP8AQ7Z5Y6 402 aa6.93□□□□□ -1.3
SNX2-204ENST00000506847 CIR1Q86X95 450 aaPredicted RBP6.93□□□□□ -1.3
SNX2-204ENST00000506847 RTF1Q92541 710 aaKnown RBP6.93□□□□□ -1.3
SNX2-204ENST00000506847 GFM2Q969S9 779 aaKnown RBP6.93□□□□□ -1.3
SNX2-204ENST00000506847 LMF1Q96S06 567 aa6.93□□□□□ -1.3
SNX2-204ENST00000506847 SPTLC3Q9NUV7 552 aa6.93□□□□□ -1.3
SNX2-204ENST00000506847 APOBEC2Q9Y235 224 aaKnown RBP6.93□□□□□ -1.3
SNX2-204ENST00000506847 NR2E1Q9Y466 385 aa6.93□□□□□ -1.3
SNX2-204ENST00000506847 ST20-MTHFSA0A0A6YYL1 179 aa6.92□□□□□ -1.3
SNX2-204ENST00000506847 B8ZZF3 427 aa6.92□□□□□ -1.3
SNX2-204ENST00000506847 ARHGAP6O43182 974 aa6.92□□□□□ -1.3
SNX2-204ENST00000506847 TGM5O43548 720 aa6.92□□□□□ -1.3
SNX2-204ENST00000506847 BRINP1O60477 761 aa6.92□□□□□ -1.3
SNX2-204ENST00000506847 PRPF6O94906 941 aaKnown RBP6.92□□□□□ -1.3
SNX2-204ENST00000506847 APOL3O95236 402 aa6.92□□□□□ -1.3
SNX2-204ENST00000506847 BPIP17213 487 aa6.92□□□□□ -1.3
SNX2-204ENST00000506847 MRE11P49959 708 aa6.92□□□□□ -1.3
SNX2-204ENST00000506847 NOLC1Q14978 699 aaKnown RBP eCLIP6.92□□□□□ -1.3
SNX2-204ENST00000506847 PCOLCEQ15113 449 aa6.92□□□□□ -1.3
SNX2-204ENST00000506847 TERF2Q15554 542 aa6.92□□□□□ -1.3
SNX2-204ENST00000506847 DDB1Q16531 1140 aa6.92□□□□□ -1.3
SNX2-204ENST00000506847 ATP13A4Q4VNC1 1196 aa6.92□□□□□ -1.3
SNX2-204ENST00000506847 KANSL1Q7Z3B3 1105 aa6.92□□□□□ -1.3
SNX2-204ENST00000506847 FILIP1Q7Z7B0 1213 aa6.92□□□□□ -1.3
SNX2-204ENST00000506847 TTC9BQ8N6N2 239 aa6.92□□□□□ -1.3
SNX2-204ENST00000506847 SAMD11Q96NU1 681 aa6.92□□□□□ -1.3
SNX2-204ENST00000506847 EMC7Q9NPA0 242 aa6.92□□□□□ -1.3
SNX2-204ENST00000506847 PPP4R1LQ9P1A2 415 aa6.92□□□□□ -1.3
SNX2-204ENST00000506847 KCNG1Q9UIX4 513 aa6.92□□□□□ -1.3
SNX2-204ENST00000506847 MSRAQ9UJ68 235 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms