RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 ANKRD20A1Q5TYW2 823 aa17.24■□□□□ 0.35
SCLT1-208ENST00000506368 ANKRD20A3Q5VUR7 823 aa17.24■□□□□ 0.35
SCLT1-208ENST00000506368 DUPD1Q68J44 220 aa17.24■□□□□ 0.35
SCLT1-208ENST00000506368 MFSD5Q6N075 450 aa17.24■□□□□ 0.35
SCLT1-208ENST00000506368 NEK8Q86SG6 692 aa17.24■□□□□ 0.35
SCLT1-208ENST00000506368 KIRREL3Q8IZU9 778 aa17.24■□□□□ 0.35
SCLT1-208ENST00000506368 RUNDC3BQ96NL0 473 aa17.24■□□□□ 0.35
SCLT1-208ENST00000506368 ERP44Q9BS26 406 aa17.24■□□□□ 0.35
SCLT1-208ENST00000506368 AP1M1Q9BXS5 423 aa17.24■□□□□ 0.35
SCLT1-208ENST00000506368 GANQ9H2C0 597 aa17.24■□□□□ 0.35
SCLT1-208ENST00000506368 ATF5Q9Y2D1 282 aaPredicted RBP17.24■□□□□ 0.35
SCLT1-208ENST00000506368 CACNA1SQ13698 1873 aa17.24■□□□□ 0.35
SCLT1-208ENST00000506368 ZNF804BA4D1E1 1349 aa17.24■□□□□ 0.35
SCLT1-208ENST00000506368 MYMKA6NI61 221 aa17.24■□□□□ 0.35
SCLT1-208ENST00000506368 BACH1O14867 736 aa17.24■□□□□ 0.35
SCLT1-208ENST00000506368 UBOX5O94941 541 aa17.24■□□□□ 0.35
SCLT1-208ENST00000506368 CCDC152Q4G0S7 254 aa17.24■□□□□ 0.35
SCLT1-208ENST00000506368 FAM133BQ5BKY9 247 aaKnown RBP17.24■□□□□ 0.35
SCLT1-208ENST00000506368 TBC1D9BQ66K14 1250 aa17.24■□□□□ 0.35
SCLT1-208ENST00000506368 SLC30A9Q6PML9 568 aa17.24■□□□□ 0.35
SCLT1-208ENST00000506368 LMNTD2Q8IXW0 634 aa17.24■□□□□ 0.35
SCLT1-208ENST00000506368 ZC3H3Q8IXZ2 948 aaKnown RBP17.24■□□□□ 0.35
SCLT1-208ENST00000506368 ATP8B4Q8TF62 1192 aa17.24■□□□□ 0.35
SCLT1-208ENST00000506368 ZFAND2BQ8WV99 257 aa17.24■□□□□ 0.35
SCLT1-208ENST00000506368 MMTAG2Q9BU76 263 aaKnown RBP17.24■□□□□ 0.35
SCLT1-208ENST00000506368 RXFP1Q9HBX9 757 aa17.24■□□□□ 0.35
SCLT1-208ENST00000506368 ATP8A2Q9NTI2 1148 aa17.24■□□□□ 0.35
SCLT1-208ENST00000506368 ZDHHC18Q9NUE0 388 aa17.24■□□□□ 0.35
SCLT1-208ENST00000506368 MTRF1LQ9UGC7 380 aaKnown RBP17.24■□□□□ 0.35
SCLT1-208ENST00000506368 NAGPAQ9UK23 515 aa17.24■□□□□ 0.35
SCLT1-208ENST00000506368 ARL2BPQ9Y2Y0 163 aa17.24■□□□□ 0.35
SCLT1-208ENST00000506368 GJB6O95452 261 aa17.23■□□□□ 0.35
SCLT1-208ENST00000506368 HMGB2P26583 209 aaKnown RBP17.23■□□□□ 0.35
SCLT1-208ENST00000506368 PDIA5Q14554 519 aa17.23■□□□□ 0.35
SCLT1-208ENST00000506368 LBRQ14739 615 aaKnown RBP17.23■□□□□ 0.35
SCLT1-208ENST00000506368 ASRGL1Q7L266 308 aa17.23■□□□□ 0.35
SCLT1-208ENST00000506368 FAM133AQ8N9E0 248 aa17.23■□□□□ 0.35
SCLT1-208ENST00000506368 FLAD1Q8NFF5 587 aa17.23■□□□□ 0.35
SCLT1-208ENST00000506368 PACSIN1Q9BY11 444 aa17.23■□□□□ 0.35
SCLT1-208ENST00000506368 CARD9Q9H257 536 aa17.23■□□□□ 0.35
SCLT1-208ENST00000506368 BLOC1S4Q9NUP1 217 aa17.23■□□□□ 0.35
SCLT1-208ENST00000506368 AMFRQ9UKV5 643 aa17.23■□□□□ 0.35
SCLT1-208ENST00000506368 NENFQ9UMX5 172 aa17.23■□□□□ 0.35
SCLT1-208ENST00000506368 DAAM1Q9Y4D1 1078 aa17.23■□□□□ 0.35
SCLT1-208ENST00000506368 IGF2BP3O00425 579 aaKnown RBP eCLIP17.22■□□□□ 0.35
SCLT1-208ENST00000506368 ADAMTS3O15072 1205 aa17.22■□□□□ 0.35
SCLT1-208ENST00000506368 SKAP2O75563 359 aaPredicted RBP17.22■□□□□ 0.35
SCLT1-208ENST00000506368 H2AFZP0C0S5 128 aa17.22■□□□□ 0.35
SCLT1-208ENST00000506368 CCNB1P14635 433 aa17.22■□□□□ 0.35
SCLT1-208ENST00000506368 EPS15P42566 896 aa17.22■□□□□ 0.35
SCLT1-208ENST00000506368 ALKBH5Q6P6C2 394 aaKnown RBP17.22■□□□□ 0.35
SCLT1-208ENST00000506368 H2AFVQ71UI9 128 aa17.22■□□□□ 0.35
SCLT1-208ENST00000506368 TBC1D16Q8TBP0 767 aa17.22■□□□□ 0.35
SCLT1-208ENST00000506368 RASGRP4Q8TDF6 673 aa17.22■□□□□ 0.35
SCLT1-208ENST00000506368 SH3TC2Q8TF17 1288 aa17.22■□□□□ 0.35
SCLT1-208ENST00000506368 RAD54LQ92698 747 aa17.22■□□□□ 0.35
SCLT1-208ENST00000506368 GRAMD1AQ96CP6 724 aa17.22■□□□□ 0.35
SCLT1-208ENST00000506368 NAF1Q96HR8 494 aaKnown RBP17.22■□□□□ 0.35
SCLT1-208ENST00000506368 PRMT1Q99873 361 aaKnown RBP17.22■□□□□ 0.35
SCLT1-208ENST00000506368 C6orf50Q9HD87 102 aa17.22■□□□□ 0.35
SCLT1-208ENST00000506368 RPL26L1Q9UNX3 145 aaKnown RBP17.22■□□□□ 0.35
SCLT1-208ENST00000506368 BAZ2AQ9UIF9 1905 aaKnown RBP17.22■□□□□ 0.35
SCLT1-208ENST00000506368 TSPY2A6NKD2 308 aa17.22■□□□□ 0.35
SCLT1-208ENST00000506368 TRAF5O00463 557 aa17.22■□□□□ 0.35
SCLT1-208ENST00000506368 PODXLO00592 558 aa17.22■□□□□ 0.35
SCLT1-208ENST00000506368 SLC26A4O43511 780 aa17.22■□□□□ 0.35
SCLT1-208ENST00000506368 CCNT1O60563 726 aaKnown RBP17.22■□□□□ 0.35
SCLT1-208ENST00000506368 DR1Q01658 176 aa17.22■□□□□ 0.35
SCLT1-208ENST00000506368 GRB10Q13322 594 aa17.22■□□□□ 0.35
SCLT1-208ENST00000506368 SGSM1Q2NKQ1 1148 aa17.22■□□□□ 0.35
SCLT1-208ENST00000506368 PARP6Q2NL67 630 aa17.22■□□□□ 0.35
SCLT1-208ENST00000506368 ADGRA1Q86SQ6 560 aa17.22■□□□□ 0.35
SCLT1-208ENST00000506368 NT5DC3Q86UY8 548 aa17.22■□□□□ 0.35
SCLT1-208ENST00000506368 HELBQ8NG08 1087 aaPredicted RBP17.22■□□□□ 0.35
SCLT1-208ENST00000506368 GPKOWQ92917 476 aaPredicted RBP eCLIP17.22■□□□□ 0.35
SCLT1-208ENST00000506368 TMX4Q9H1E5 349 aaPredicted RBP17.22■□□□□ 0.35
SCLT1-208ENST00000506368 AGAP1Q9UPQ3 857 aa17.22■□□□□ 0.35
SCLT1-208ENST00000506368 LRRC42Q9Y546 428 aa17.22■□□□□ 0.35
SCLT1-208ENST00000506368 POTEFA5A3E0 1075 aa17.21■□□□□ 0.35
SCLT1-208ENST00000506368 HIP1RO75146 1068 aa17.21■□□□□ 0.35
SCLT1-208ENST00000506368 NPTXRO95502 500 aa17.21■□□□□ 0.35
SCLT1-208ENST00000506368 POTEIP0CG38 1075 aa17.21■□□□□ 0.35
SCLT1-208ENST00000506368 POTEJP0CG39 1038 aa17.21■□□□□ 0.35
SCLT1-208ENST00000506368 PEX19P40855 299 aa17.21■□□□□ 0.35
SCLT1-208ENST00000506368 BCAMP50895 628 aa17.21■□□□□ 0.35
SCLT1-208ENST00000506368 KCNJ2P63252 427 aa17.21■□□□□ 0.35
SCLT1-208ENST00000506368 ROR2Q01974 943 aaKnown RBP17.21■□□□□ 0.35
SCLT1-208ENST00000506368 GRIPAP1Q4V328 841 aa17.21■□□□□ 0.35
SCLT1-208ENST00000506368 POTEEQ6S8J3 1075 aa17.21■□□□□ 0.35
SCLT1-208ENST00000506368 IRF2BP2Q7Z5L9 587 aa17.21■□□□□ 0.35
SCLT1-208ENST00000506368 APBB1IPQ7Z5R6 666 aaPredicted RBP17.21■□□□□ 0.35
SCLT1-208ENST00000506368 SYNE4Q8N205 404 aa17.21■□□□□ 0.35
SCLT1-208ENST00000506368 SPDYE1Q8NFV5 336 aaPredicted RBP17.21■□□□□ 0.35
SCLT1-208ENST00000506368 FBF1Q8TES7 1133 aa17.21■□□□□ 0.35
SCLT1-208ENST00000506368 TAOK3Q9H2K8 898 aa17.21■□□□□ 0.35
SCLT1-208ENST00000506368 EPB41L4BQ9H329 900 aa17.21■□□□□ 0.35
SCLT1-208ENST00000506368 ABCF3Q9NUQ8 709 aa17.21■□□□□ 0.35
SCLT1-208ENST00000506368 LRRD1A4D1F6 860 aa17.2■□□□□ 0.34
SCLT1-208ENST00000506368 USP17L12C9JPN9 530 aa17.2■□□□□ 0.34
SCLT1-208ENST00000506368 USP17L21D6R901 530 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms