RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 EYA4O95677 639 aa9.37□□□□□ -0.91
SNF8-204ENST00000506104 FOSP01100 380 aaPredicted RBP9.37□□□□□ -0.91
SNF8-204ENST00000506104 WEE2P0C1S8 567 aa9.37□□□□□ -0.91
SNF8-204ENST00000506104 METAP2P50579 478 aaKnown RBP eCLIP9.37□□□□□ -0.91
SNF8-204ENST00000506104 CLCN3P51790 818 aa9.37□□□□□ -0.91
SNF8-204ENST00000506104 KRT17Q04695 432 aa9.37□□□□□ -0.91
SNF8-204ENST00000506104 SIGLEC14Q08ET2 396 aa9.37□□□□□ -0.91
SNF8-204ENST00000506104 COL9A3Q14050 684 aaPredicted RBP9.37□□□□□ -0.91
SNF8-204ENST00000506104 CBX2Q14781 532 aaPredicted RBP9.37□□□□□ -0.91
SNF8-204ENST00000506104 DUSP6Q16828 381 aa9.37□□□□□ -0.91
SNF8-204ENST00000506104 LONRF3Q496Y0 759 aa9.37□□□□□ -0.91
SNF8-204ENST00000506104 ZNF484Q5JVG2 852 aa9.37□□□□□ -0.91
SNF8-204ENST00000506104 CREB3L3Q68CJ9 461 aa9.37□□□□□ -0.91
SNF8-204ENST00000506104 ANKRD54Q6NXT1 300 aa9.37□□□□□ -0.91
SNF8-204ENST00000506104 SLC24A5Q71RS6 500 aa9.37□□□□□ -0.91
SNF8-204ENST00000506104 ATP8B4Q8TF62 1192 aa9.37□□□□□ -0.91
SNF8-204ENST00000506104 TMEM40Q8WWA1 233 aa9.37□□□□□ -0.91
SNF8-204ENST00000506104 MAP7D2Q96T17 732 aa9.37□□□□□ -0.91
SNF8-204ENST00000506104 ZNF577Q9BSK1 485 aa9.37□□□□□ -0.91
SNF8-204ENST00000506104 RIC8AQ9NPQ8 531 aa9.37□□□□□ -0.91
SNF8-204ENST00000506104 RBM28Q9NW13 759 aaKnown RBP9.37□□□□□ -0.91
SNF8-204ENST00000506104 XIRP2A4UGR9 3374 aa9.37□□□□□ -0.91
SNF8-204ENST00000506104 CNTNAP5Q8WYK1 1306 aa9.36□□□□□ -0.91
SNF8-204ENST00000506104 KLF18A0A0U1RQI7 1052 aa9.36□□□□□ -0.91
SNF8-204ENST00000506104 H0Y858 1186 aa9.36□□□□□ -0.91
SNF8-204ENST00000506104 CHMP2AO43633 222 aa9.36□□□□□ -0.91
SNF8-204ENST00000506104 GFRA3O60609 400 aa9.36□□□□□ -0.91
SNF8-204ENST00000506104 CCNE2O96020 404 aa9.36□□□□□ -0.91
SNF8-204ENST00000506104 FGFR4P22455 802 aa9.36□□□□□ -0.91
SNF8-204ENST00000506104 LIFRP42702 1097 aa9.36□□□□□ -0.91
SNF8-204ENST00000506104 NLRP11P59045 1033 aaKnown RBP9.36□□□□□ -0.91
SNF8-204ENST00000506104 UBE3AQ05086 875 aa9.36□□□□□ -0.91
SNF8-204ENST00000506104 RNF20Q5VTR2 975 aa9.36□□□□□ -0.91
SNF8-204ENST00000506104 CES5AQ6NT32 575 aa9.36□□□□□ -0.91
SNF8-204ENST00000506104 FAM228AQ86W67 206 aa9.36□□□□□ -0.91
SNF8-204ENST00000506104 CCDC60Q8IWA6 550 aaPredicted RBP9.36□□□□□ -0.91
SNF8-204ENST00000506104 KIAA0319LQ8IZA0 1049 aa9.36□□□□□ -0.91
SNF8-204ENST00000506104 LRRC71Q8N4P6 559 aa9.36□□□□□ -0.91
SNF8-204ENST00000506104 VN1R2Q8NFZ6 395 aa9.36□□□□□ -0.91
SNF8-204ENST00000506104 MRPS27Q92552 414 aaKnown RBP9.36□□□□□ -0.91
SNF8-204ENST00000506104 ZNF558Q96NG5 402 aa9.36□□□□□ -0.91
SNF8-204ENST00000506104 CDCA3Q99618 268 aaPredicted RBP9.36□□□□□ -0.91
SNF8-204ENST00000506104 PRRX2Q99811 253 aa9.36□□□□□ -0.91
SNF8-204ENST00000506104 MFSD1Q9H3U5 465 aa9.36□□□□□ -0.91
SNF8-204ENST00000506104 RGS18Q9NS28 235 aa9.36□□□□□ -0.91
SNF8-204ENST00000506104 GABBR1Q9UBS5 961 aa9.36□□□□□ -0.91
SNF8-204ENST00000506104 CDH22Q9UJ99 828 aa9.36□□□□□ -0.91
SNF8-204ENST00000506104 KDM3AQ9Y4C1 1321 aa9.35□□□□□ -0.91
SNF8-204ENST00000506104 HIDE1A8MVS5 230 aa9.35□□□□□ -0.91
SNF8-204ENST00000506104 C9IYK1 514 aa9.35□□□□□ -0.91
SNF8-204ENST00000506104 NT5C1B-RDH14C9J2C7 533 aa9.35□□□□□ -0.91
SNF8-204ENST00000506104 IPO5O00410 1097 aaKnown RBP9.35□□□□□ -0.91
SNF8-204ENST00000506104 PDGFBP01127 241 aaPredicted RBP9.35□□□□□ -0.91
SNF8-204ENST00000506104 PSAPP07602 524 aa9.35□□□□□ -0.91
SNF8-204ENST00000506104 TMOD1P28289 359 aa9.35□□□□□ -0.91
SNF8-204ENST00000506104 AVPR2P30518 371 aa9.35□□□□□ -0.91
SNF8-204ENST00000506104 SLC26A2P50443 739 aa9.35□□□□□ -0.91
SNF8-204ENST00000506104 CRYBB1P53674 252 aaPredicted RBP9.35□□□□□ -0.91
SNF8-204ENST00000506104 BMS1Q14692 1282 aaKnown RBP9.35□□□□□ -0.91
SNF8-204ENST00000506104 PKN1Q16512 942 aa9.35□□□□□ -0.91
SNF8-204ENST00000506104 PTPN21Q16825 1174 aa9.35□□□□□ -0.91
SNF8-204ENST00000506104 PRR16Q569H4 304 aa9.35□□□□□ -0.91
SNF8-204ENST00000506104 RARS2Q5T160 578 aaKnown RBP9.35□□□□□ -0.91
SNF8-204ENST00000506104 TYW1BQ6NUM6 668 aa9.35□□□□□ -0.91
SNF8-204ENST00000506104 EFCAB12Q6NXP0 572 aa9.35□□□□□ -0.91
SNF8-204ENST00000506104 APOA5Q6Q788 366 aa9.35□□□□□ -0.91
SNF8-204ENST00000506104 KCNT2Q6UVM3 1135 aa9.35□□□□□ -0.91
SNF8-204ENST00000506104 ABHD15Q6UXT9 468 aa9.35□□□□□ -0.91
SNF8-204ENST00000506104 KREMEN2Q8NCW0 462 aa9.35□□□□□ -0.91
SNF8-204ENST00000506104 HELQQ8TDG4 1101 aa9.35□□□□□ -0.91
SNF8-204ENST00000506104 NLRP7Q8WX94 980 aa9.35□□□□□ -0.91
SNF8-204ENST00000506104 ESYT1Q9BSJ8 1104 aa9.35□□□□□ -0.91
SNF8-204ENST00000506104 MTA3Q9BTC8 594 aa9.35□□□□□ -0.91
SNF8-204ENST00000506104 LSG1Q9H089 658 aaKnown RBP9.35□□□□□ -0.91
SNF8-204ENST00000506104 TMEM117Q9H0C3 514 aa9.35□□□□□ -0.91
SNF8-204ENST00000506104 GBP3Q9H0R5 595 aa9.35□□□□□ -0.91
SNF8-204ENST00000506104 CWH43Q9H720 699 aa9.35□□□□□ -0.91
SNF8-204ENST00000506104 TMEM161AQ9NX61 479 aa9.35□□□□□ -0.91
SNF8-204ENST00000506104 SPG21Q9NZD8 308 aa9.35□□□□□ -0.91
SNF8-204ENST00000506104 INPP5FQ9Y2H2 1132 aa9.35□□□□□ -0.91
SNF8-204ENST00000506104 NR2E1Q9Y466 385 aa9.35□□□□□ -0.91
SNF8-204ENST00000506104 COL1A2P08123 1366 aa9.35□□□□□ -0.91
SNF8-204ENST00000506104 PIEZO1Q92508 2521 aa9.34□□□□□ -0.91
SNF8-204ENST00000506104 FSD2A1L4K1 749 aa9.34□□□□□ -0.91
SNF8-204ENST00000506104 FAM86B1E9PN63 330 aa9.34□□□□□ -0.91
SNF8-204ENST00000506104 TULP1O00294 542 aaPredicted RBP9.34□□□□□ -0.91
SNF8-204ENST00000506104 MEIS1O00470 390 aa9.34□□□□□ -0.91
SNF8-204ENST00000506104 HOXA2O43364 376 aa9.34□□□□□ -0.91
SNF8-204ENST00000506104 ST18O60284 1047 aa9.34□□□□□ -0.91
SNF8-204ENST00000506104 CSDE1O75534 798 aaKnown RBP9.34□□□□□ -0.91
SNF8-204ENST00000506104 C22orf31O95567 290 aa9.34□□□□□ -0.91
SNF8-204ENST00000506104 CXCL14O95715 111 aa9.34□□□□□ -0.91
SNF8-204ENST00000506104 FAM86B2P0C5J1 330 aa9.34□□□□□ -0.91
SNF8-204ENST00000506104 ATF7P17544 494 aaPredicted RBP9.34□□□□□ -0.91
SNF8-204ENST00000506104 AKAP17AQ02040 695 aaKnown RBP9.34□□□□□ -0.91
SNF8-204ENST00000506104 TCF15Q12870 199 aa9.34□□□□□ -0.91
SNF8-204ENST00000506104 AP3B2Q13367 1082 aa9.34□□□□□ -0.91
SNF8-204ENST00000506104 SMC1AQ14683 1233 aaKnown RBP9.34□□□□□ -0.91
SNF8-204ENST00000506104 PDE12Q6L8Q7 609 aaKnown RBP9.34□□□□□ -0.91
SNF8-204ENST00000506104 PPP1R18Q6NYC8 613 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms