RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 PCDHA5Q9Y5H7 936 aa8.01□□□□□ -1.13
NUP54-204ENST00000506098 MICAL3Q7RTP6 2002 aa8.01□□□□□ -1.13
NUP54-204ENST00000506098 ARHGEF35A5YM69 484 aa8□□□□□ -1.13
NUP54-204ENST00000506098 TMEM150BA6NC51 233 aa8□□□□□ -1.13
NUP54-204ENST00000506098 MOXD2PA6NHM9 499 aa8□□□□□ -1.13
NUP54-204ENST00000506098 RRN3P2A6NIE6 340 aa8□□□□□ -1.13
NUP54-204ENST00000506098 GAS2O43903 313 aaKnown RBP8□□□□□ -1.13
NUP54-204ENST00000506098 MAFO75444 373 aaPredicted RBP8□□□□□ -1.13
NUP54-204ENST00000506098 DGAT1O75907 488 aa8□□□□□ -1.13
NUP54-204ENST00000506098 CABYRO75952 493 aa8□□□□□ -1.13
NUP54-204ENST00000506098 RHOBTB3O94955 611 aa8□□□□□ -1.13
NUP54-204ENST00000506098 SMC2O95347 1197 aa8□□□□□ -1.13
NUP54-204ENST00000506098 RPN1P04843 607 aaKnown RBP8□□□□□ -1.13
NUP54-204ENST00000506098 ASGR1P07306 291 aa8□□□□□ -1.13
NUP54-204ENST00000506098 MYL3P08590 195 aa8□□□□□ -1.13
NUP54-204ENST00000506098 CASP1P29466 404 aa8□□□□□ -1.13
NUP54-204ENST00000506098 RFC5P40937 340 aa8□□□□□ -1.13
NUP54-204ENST00000506098 PSEN2P49810 448 aa8□□□□□ -1.13
NUP54-204ENST00000506098 ZNF131P52739 623 aa8□□□□□ -1.13
NUP54-204ENST00000506098 NPEPPSP55786 919 aa8□□□□□ -1.13
NUP54-204ENST00000506098 ADAM17P78536 824 aa8□□□□□ -1.13
NUP54-204ENST00000506098 KCNB1Q14721 858 aa8□□□□□ -1.13
NUP54-204ENST00000506098 MFSD10Q14728 455 aa8□□□□□ -1.13
NUP54-204ENST00000506098 KCNA10Q16322 511 aa8□□□□□ -1.13
NUP54-204ENST00000506098 TMEM132AQ24JP5 1023 aa8□□□□□ -1.13
NUP54-204ENST00000506098 ZSCAN23Q3MJ62 389 aa8□□□□□ -1.13
NUP54-204ENST00000506098 PLA2G4FQ68DD2 849 aa8□□□□□ -1.13
NUP54-204ENST00000506098 PADI6Q6TGC4 694 aa8□□□□□ -1.13
NUP54-204ENST00000506098 UNC13DQ70J99 1090 aa8□□□□□ -1.13
NUP54-204ENST00000506098 SESTD1Q86VW0 696 aa8□□□□□ -1.13
NUP54-204ENST00000506098 GPBP1Q86WP2 473 aa8□□□□□ -1.13
NUP54-204ENST00000506098 CKAP2LQ8IYA6 745 aa8□□□□□ -1.13
NUP54-204ENST00000506098 TRIML1Q8N9V2 468 aa8□□□□□ -1.13
NUP54-204ENST00000506098 ARRDC4Q8NCT1 418 aa8□□□□□ -1.13
NUP54-204ENST00000506098 SMARCE1Q969G3 411 aa8□□□□□ -1.13
NUP54-204ENST00000506098 CEP170P1Q96L14 293 aa8□□□□□ -1.13
NUP54-204ENST00000506098 FUCA2Q9BTY2 467 aa8□□□□□ -1.13
NUP54-204ENST00000506098 RUSC1Q9BVN2 902 aa8□□□□□ -1.13
NUP54-204ENST00000506098 CRISPLD2Q9H0B8 497 aa8□□□□□ -1.13
NUP54-204ENST00000506098 BMP2KQ9NSY1 1161 aaPredicted RBP8□□□□□ -1.13
NUP54-204ENST00000506098 SEPT9Q9UHD8 586 aaPredicted RBP8□□□□□ -1.13
NUP54-204ENST00000506098 OGDHLQ9ULD0 1010 aa8□□□□□ -1.13
NUP54-204ENST00000506098 NRCAMQ92823 1304 aa8□□□□□ -1.13
NUP54-204ENST00000506098 MAGEB2O15479 319 aa7.99□□□□□ -1.13
NUP54-204ENST00000506098 SGPL1O95470 568 aa7.99□□□□□ -1.13
NUP54-204ENST00000506098 SSBP05455 408 aaKnown RBP eCLIP7.99□□□□□ -1.13
NUP54-204ENST00000506098 GJB1P08034 283 aa7.99□□□□□ -1.13
NUP54-204ENST00000506098 INSRRP14616 1297 aa7.99□□□□□ -1.13
NUP54-204ENST00000506098 MARK3P27448 753 aa7.99□□□□□ -1.13
NUP54-204ENST00000506098 ACLYP53396 1101 aa7.99□□□□□ -1.13
NUP54-204ENST00000506098 RTP1P59025 263 aa7.99□□□□□ -1.13
NUP54-204ENST00000506098 ZNF445P59923 1031 aa7.99□□□□□ -1.13
NUP54-204ENST00000506098 PTPN11Q06124 597 aaPredicted RBP7.99□□□□□ -1.13
NUP54-204ENST00000506098 MAPK7Q13164 816 aa7.99□□□□□ -1.13
NUP54-204ENST00000506098 PSMD2Q13200 908 aa7.99□□□□□ -1.13
NUP54-204ENST00000506098 MORC3Q14149 939 aa7.99□□□□□ -1.13
NUP54-204ENST00000506098 DHX8Q14562 1220 aaKnown RBP7.99□□□□□ -1.13
NUP54-204ENST00000506098 KIAA0753Q2KHM9 967 aa7.99□□□□□ -1.13
NUP54-204ENST00000506098 MTERF2Q49AM1 385 aa7.99□□□□□ -1.13
NUP54-204ENST00000506098 COBLL1Q53SF7 1204 aa7.99□□□□□ -1.13
NUP54-204ENST00000506098 MARCH8Q5T0T0 291 aa7.99□□□□□ -1.13
NUP54-204ENST00000506098 DYMQ7RTS9 669 aa7.99□□□□□ -1.13
NUP54-204ENST00000506098 CCDC65Q8IXS2 484 aa7.99□□□□□ -1.13
NUP54-204ENST00000506098 DAW1Q8N136 415 aa7.99□□□□□ -1.13
NUP54-204ENST00000506098 LINC01465Q8N7H1 131 aa7.99□□□□□ -1.13
NUP54-204ENST00000506098 MCPH1Q8NEM0 835 aa7.99□□□□□ -1.13
NUP54-204ENST00000506098 ERCC4Q92889 916 aaPredicted RBP7.99□□□□□ -1.13
NUP54-204ENST00000506098 KCNN1Q92952 543 aa7.99□□□□□ -1.13
NUP54-204ENST00000506098 CCDC43Q96MW1 224 aaKnown RBP7.99□□□□□ -1.13
NUP54-204ENST00000506098 JPH2Q9BR39 696 aaPredicted RBP7.99□□□□□ -1.13
NUP54-204ENST00000506098 REEP2Q9BRK0 252 aa7.99□□□□□ -1.13
NUP54-204ENST00000506098 SEZ6LQ9BYH1 1024 aa7.99□□□□□ -1.13
NUP54-204ENST00000506098 GTPBP4Q9BZE4 634 aaKnown RBP7.99□□□□□ -1.13
NUP54-204ENST00000506098 RNF208Q9H0X6 261 aa7.99□□□□□ -1.13
NUP54-204ENST00000506098 BLZF1Q9H2G9 400 aa7.99□□□□□ -1.13
NUP54-204ENST00000506098 C17orf75Q9HAS0 396 aa7.99□□□□□ -1.13
NUP54-204ENST00000506098 ATP6V0A4Q9HBG4 840 aa7.99□□□□□ -1.13
NUP54-204ENST00000506098 XPNPEP1Q9NQW7 623 aa7.99□□□□□ -1.13
NUP54-204ENST00000506098 SEL1LQ9UBV2 794 aa7.99□□□□□ -1.13
NUP54-204ENST00000506098 PHF24Q9UPV7 400 aa7.99□□□□□ -1.13
NUP54-204ENST00000506098 NPHP3-ACAD11A0A0J9YXS1 232 aa7.98□□□□□ -1.13
NUP54-204ENST00000506098 MBLAC1A4D2B0 266 aaPredicted RBP7.98□□□□□ -1.13
NUP54-204ENST00000506098 DNM1LO00429 736 aa7.98□□□□□ -1.13
NUP54-204ENST00000506098 USO1O60763 962 aaKnown RBP7.98□□□□□ -1.13
NUP54-204ENST00000506098 HIP1RO75146 1068 aa7.98□□□□□ -1.13
NUP54-204ENST00000506098 C22orf31O95567 290 aa7.98□□□□□ -1.13
NUP54-204ENST00000506098 SMIM10L2AP0DMW4 78 aa7.98□□□□□ -1.13
NUP54-204ENST00000506098 SMIM10L2BP0DMW5 78 aa7.98□□□□□ -1.13
NUP54-204ENST00000506098 MAPTP10636 758 aaKnown RBP7.98□□□□□ -1.13
NUP54-204ENST00000506098 GAP43P17677 238 aa7.98□□□□□ -1.13
NUP54-204ENST00000506098 KLRC1P26715 233 aa7.98□□□□□ -1.13
NUP54-204ENST00000506098 ARL2P36404 184 aa7.98□□□□□ -1.13
NUP54-204ENST00000506098 POLGP54098 1239 aaPredicted RBP7.98□□□□□ -1.13
NUP54-204ENST00000506098 NLRP12P59046 1061 aa7.98□□□□□ -1.13
NUP54-204ENST00000506098 ASIC1P78348 528 aa7.98□□□□□ -1.13
NUP54-204ENST00000506098 TBC1D8BQ0IIM8 1120 aa7.98□□□□□ -1.13
NUP54-204ENST00000506098 COASYQ13057 564 aa7.98□□□□□ -1.13
NUP54-204ENST00000506098 PPFIA1Q13136 1202 aa7.98□□□□□ -1.13
NUP54-204ENST00000506098 EMC2Q15006 297 aa7.98□□□□□ -1.13
NUP54-204ENST00000506098 GRIK4Q16099 956 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 1087.5 ms