RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 MSRAQ9UJ68 235 aa7.82□□□□□ -1.16
NIPBL-205ENST00000505998 ABCA5Q8WWZ7 1642 aa7.81□□□□□ -1.16
NIPBL-205ENST00000505998 FGD5Q6ZNL6 1462 aa7.81□□□□□ -1.16
NIPBL-205ENST00000505998 GPR39O43194 453 aa7.81□□□□□ -1.16
NIPBL-205ENST00000505998 KCNC1P48547 511 aa7.81□□□□□ -1.16
NIPBL-205ENST00000505998 RGS3P49796 1198 aa7.81□□□□□ -1.16
NIPBL-205ENST00000505998 FAM26FQ5R3K3 315 aa7.81□□□□□ -1.16
NIPBL-205ENST00000505998 RNF219Q5W0B1 726 aaPredicted RBP7.81□□□□□ -1.16
NIPBL-205ENST00000505998 KANK2Q63ZY3 851 aa7.81□□□□□ -1.16
NIPBL-205ENST00000505998 IQSEC1Q6DN90 963 aa7.81□□□□□ -1.16
NIPBL-205ENST00000505998 SP8Q8IXZ3 490 aa7.81□□□□□ -1.16
NIPBL-205ENST00000505998 TXNDC5Q8NBS9 432 aaKnown RBP7.81□□□□□ -1.16
NIPBL-205ENST00000505998 YTHDC1Q96MU7 727 aaKnown RBP7.81□□□□□ -1.16
NIPBL-205ENST00000505998 TMEM168Q9H0V1 697 aa7.81□□□□□ -1.16
NIPBL-205ENST00000505998 USP36Q9P275 1121 aaKnown RBP7.81□□□□□ -1.16
NIPBL-205ENST00000505998 NOC2LQ9Y3T9 749 aaKnown RBP7.81□□□□□ -1.16
NIPBL-205ENST00000505998 ABCA10Q8WWZ4 1543 aa7.8□□□□□ -1.16
NIPBL-205ENST00000505998 APOL3O95236 402 aa7.8□□□□□ -1.16
NIPBL-205ENST00000505998 SESN3P58005 492 aa7.8□□□□□ -1.16
NIPBL-205ENST00000505998 CD83Q01151 205 aa7.8□□□□□ -1.16
NIPBL-205ENST00000505998 LHFPL2Q6ZUX7 228 aa7.8□□□□□ -1.16
NIPBL-205ENST00000505998 ZNF761Q86XN6 746 aaPredicted RBP7.8□□□□□ -1.16
NIPBL-205ENST00000505998 SPATS2Q86XZ4 545 aaKnown RBP7.8□□□□□ -1.16
NIPBL-205ENST00000505998 SIAH1Q8IUQ4 282 aa7.8□□□□□ -1.16
NIPBL-205ENST00000505998 NUDT10Q8NFP7 164 aa7.8□□□□□ -1.16
NIPBL-205ENST00000505998 NUDT11Q96G61 164 aa7.8□□□□□ -1.16
NIPBL-205ENST00000505998 BRINP2Q9C0B6 783 aa7.8□□□□□ -1.16
NIPBL-205ENST00000505998 MS4A5Q9H3V2 200 aa7.8□□□□□ -1.16
NIPBL-205ENST00000505998 POFUT1Q9H488 388 aa7.8□□□□□ -1.16
NIPBL-205ENST00000505998 LUC7LQ9NQ29 371 aaKnown RBP7.8□□□□□ -1.16
NIPBL-205ENST00000505998 FBXO10Q9UK96 956 aa7.8□□□□□ -1.16
NIPBL-205ENST00000505998 IFT140Q96RY7 1462 aa7.8□□□□□ -1.16
NIPBL-205ENST00000505998 KLHL18O94889 574 aa7.79□□□□□ -1.16
NIPBL-205ENST00000505998 PRPF6O94906 941 aaKnown RBP7.79□□□□□ -1.16
NIPBL-205ENST00000505998 BMP7P18075 431 aa7.79□□□□□ -1.16
NIPBL-205ENST00000505998 ADCY8P40145 1251 aa7.79□□□□□ -1.16
NIPBL-205ENST00000505998 ADCY2Q08462 1091 aa7.79□□□□□ -1.16
NIPBL-205ENST00000505998 MAP3K12Q12852 859 aa7.79□□□□□ -1.16
NIPBL-205ENST00000505998 KRTAP19-4Q3LI73 84 aa7.79□□□□□ -1.16
NIPBL-205ENST00000505998 RGL3Q3MIN7 710 aa7.79□□□□□ -1.16
NIPBL-205ENST00000505998 LCNL1Q6ZST4 164 aa7.79□□□□□ -1.16
NIPBL-205ENST00000505998 FRMD7Q6ZUT3 714 aa7.79□□□□□ -1.16
NIPBL-205ENST00000505998 ESPNLQ6ZVH7 1005 aa7.79□□□□□ -1.16
NIPBL-205ENST00000505998 OTOP2Q7RTS6 562 aa7.79□□□□□ -1.16
NIPBL-205ENST00000505998 RASSF3Q86WH2 238 aa7.79□□□□□ -1.16
NIPBL-205ENST00000505998 RPGRQ92834 1020 aaKnown RBP7.79□□□□□ -1.16
NIPBL-205ENST00000505998 LCORQ96JN0 433 aaPredicted RBP7.79□□□□□ -1.16
NIPBL-205ENST00000505998 MYL10Q9BUA6 226 aa7.79□□□□□ -1.16
NIPBL-205ENST00000505998 ZDHHC5Q9C0B5 715 aa7.79□□□□□ -1.16
NIPBL-205ENST00000505998 BARX1Q9HBU1 254 aaPredicted RBP7.79□□□□□ -1.16
NIPBL-205ENST00000505998 C9orf118A6NHY6 69 aa7.78□□□□□ -1.16
NIPBL-205ENST00000505998 KDM1AO60341 852 aa7.78□□□□□ -1.16
NIPBL-205ENST00000505998 TRIM13O60858 407 aa7.78□□□□□ -1.16
NIPBL-205ENST00000505998 CDK11BP21127 795 aaKnown RBP7.78□□□□□ -1.16
NIPBL-205ENST00000505998 POLD1P28340 1107 aa7.78□□□□□ -1.16
NIPBL-205ENST00000505998 GJA9P57773 515 aa7.78□□□□□ -1.16
NIPBL-205ENST00000505998 NFATC3Q12968 1075 aa7.78□□□□□ -1.16
NIPBL-205ENST00000505998 MOGSQ13724 837 aa7.78□□□□□ -1.16
NIPBL-205ENST00000505998 MYBPC3Q14896 1274 aa7.78□□□□□ -1.16
NIPBL-205ENST00000505998 NOLC1Q14978 699 aaKnown RBP eCLIP7.78□□□□□ -1.16
NIPBL-205ENST00000505998 GRAMD4Q6IC98 578 aa7.78□□□□□ -1.16
NIPBL-205ENST00000505998 FAM124AQ86V42 546 aa7.78□□□□□ -1.16
NIPBL-205ENST00000505998 IFNL2Q8IZJ0 200 aa7.78□□□□□ -1.16
NIPBL-205ENST00000505998 CLRN3Q8NCR9 226 aa7.78□□□□□ -1.16
NIPBL-205ENST00000505998 GPATCH3Q96I76 525 aa7.78□□□□□ -1.16
NIPBL-205ENST00000505998 ZNF496Q96IT1 587 aaPredicted RBP7.78□□□□□ -1.16
NIPBL-205ENST00000505998 KCNG1Q9UIX4 513 aa7.78□□□□□ -1.16
NIPBL-205ENST00000505998 EIF4G3O43432 1585 aaKnown RBP7.77□□□□□ -1.17
NIPBL-205ENST00000505998 LCHNA4D1U4 455 aa7.77□□□□□ -1.17
NIPBL-205ENST00000505998 MROH6A6NGR9 719 aa7.77□□□□□ -1.17
NIPBL-205ENST00000505998 CUTAO60888 179 aa7.77□□□□□ -1.17
NIPBL-205ENST00000505998 SASH1O94885 1247 aa7.77□□□□□ -1.17
NIPBL-205ENST00000505998 BCAR1P56945 870 aa7.77□□□□□ -1.17
NIPBL-205ENST00000505998 JAG1P78504 1218 aa7.77□□□□□ -1.17
NIPBL-205ENST00000505998 FAPQ12884 760 aa7.77□□□□□ -1.17
NIPBL-205ENST00000505998 NT5DC1Q5TFE4 455 aa7.77□□□□□ -1.17
NIPBL-205ENST00000505998 Q6ZUG5 572 aa7.77□□□□□ -1.17
NIPBL-205ENST00000505998 KLHL36Q8N4N3 616 aa7.77□□□□□ -1.17
NIPBL-205ENST00000505998 MARCH10Q8NA82 808 aaPredicted RBP7.77□□□□□ -1.17
NIPBL-205ENST00000505998 FERMT2Q96AC1 680 aa7.77□□□□□ -1.17
NIPBL-205ENST00000505998 SEMA4AQ9H3S1 761 aa7.77□□□□□ -1.17
NIPBL-205ENST00000505998 NOP58Q9Y2X3 529 aaKnown RBP7.77□□□□□ -1.17
NIPBL-205ENST00000505998 PHLDB1Q86UU1 1377 aa7.76□□□□□ -1.17
NIPBL-205ENST00000505998 A0A0G2JNJ9 132 aa7.76□□□□□ -1.17
NIPBL-205ENST00000505998 MAFGO15525 162 aa7.76□□□□□ -1.17
NIPBL-205ENST00000505998 MAFO75444 373 aaPredicted RBP7.76□□□□□ -1.17
NIPBL-205ENST00000505998 CDKN1CP49918 316 aaPredicted RBP7.76□□□□□ -1.17
NIPBL-205ENST00000505998 KIAA2012Q0VF49 1180 aa7.76□□□□□ -1.17
NIPBL-205ENST00000505998 TOP3AQ13472 1001 aaPredicted RBP7.76□□□□□ -1.17
NIPBL-205ENST00000505998 TMEM200BQ69YZ2 307 aa7.76□□□□□ -1.17
NIPBL-205ENST00000505998 KIAA1841Q6NSI8 718 aa7.76□□□□□ -1.17
NIPBL-205ENST00000505998 REXO1L1PQ8IX06 675 aa7.76□□□□□ -1.17
NIPBL-205ENST00000505998 PRPF38AQ8NAV1 312 aaKnown RBP7.76□□□□□ -1.17
NIPBL-205ENST00000505998 SYT8Q8NBV8 401 aa7.76□□□□□ -1.17
NIPBL-205ENST00000505998 COG1Q8WTW3 980 aa7.76□□□□□ -1.17
NIPBL-205ENST00000505998 SLC5A4Q9NY91 659 aa7.76□□□□□ -1.17
NIPBL-205ENST00000505998 Q9UFV3 132 aa7.76□□□□□ -1.17
NIPBL-205ENST00000505998 CDC42EP3Q9UKI2 254 aa7.76□□□□□ -1.17
NIPBL-205ENST00000505998 ZDHHC9Q9Y397 364 aa7.76□□□□□ -1.17
NIPBL-205ENST00000505998 PBRM1Q86U86 1689 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms