RNA–Protein interactions for RNA: ENST00000505957.1

CPNE4-206, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-206ENST00000505957 AXDND1Q5T1B0 1012 aaPredicted RBP12.09□□□□□ -0.47
CPNE4-206ENST00000505957 BMP8AQ7Z5Y6 402 aa12.09□□□□□ -0.47
CPNE4-206ENST00000505957 RSPH3Q86UC2 560 aa12.09□□□□□ -0.47
CPNE4-206ENST00000505957 TEX2Q8IWB9 1127 aa12.09□□□□□ -0.47
CPNE4-206ENST00000505957 GIMAP8Q8ND71 665 aaPredicted RBP12.09□□□□□ -0.47
CPNE4-206ENST00000505957 MRPS27Q92552 414 aaKnown RBP12.09□□□□□ -0.47
CPNE4-206ENST00000505957 P2RX5Q93086 422 aa12.09□□□□□ -0.47
CPNE4-206ENST00000505957 RRP36Q96EU6 259 aaKnown RBP12.09□□□□□ -0.47
CPNE4-206ENST00000505957 NUP62CLQ9H1M0 184 aa12.09□□□□□ -0.47
CPNE4-206ENST00000505957 CLSTN2Q9H4D0 955 aa12.09□□□□□ -0.47
CPNE4-206ENST00000505957 NOL7Q9UMY1 257 aaKnown RBP12.09□□□□□ -0.47
CPNE4-206ENST00000505957 PCDHA4Q9UN74 947 aa12.09□□□□□ -0.47
CPNE4-206ENST00000505957 MYO7AQ13402 2215 aa12.09□□□□□ -0.47
CPNE4-206ENST00000505957 EYA4O95677 639 aa12.08□□□□□ -0.48
CPNE4-206ENST00000505957 RPLP2P05387 115 aaKnown RBP12.08□□□□□ -0.48
CPNE4-206ENST00000505957 GHRP10912 638 aa12.08□□□□□ -0.48
CPNE4-206ENST00000505957 CMA1P23946 247 aa12.08□□□□□ -0.48
CPNE4-206ENST00000505957 ME1P48163 572 aa12.08□□□□□ -0.48
CPNE4-206ENST00000505957 TOB1P50616 345 aaPredicted RBP12.08□□□□□ -0.48
CPNE4-206ENST00000505957 NLRP5P59047 1200 aa12.08□□□□□ -0.48
CPNE4-206ENST00000505957 FAM160A1Q05DH4 1040 aa12.08□□□□□ -0.48
CPNE4-206ENST00000505957 NR5A1Q13285 461 aa12.08□□□□□ -0.48
CPNE4-206ENST00000505957 BTG3Q14201 252 aaPredicted RBP12.08□□□□□ -0.48
CPNE4-206ENST00000505957 LPIN1Q14693 890 aa12.08□□□□□ -0.48
CPNE4-206ENST00000505957 PCNX4Q63HM2 1172 aa12.08□□□□□ -0.48
CPNE4-206ENST00000505957 WWC2Q6AWC2 1192 aa12.08□□□□□ -0.48
CPNE4-206ENST00000505957 CCDC73Q6ZRK6 1079 aa12.08□□□□□ -0.48
CPNE4-206ENST00000505957 GAS2L3Q86XJ1 694 aa12.08□□□□□ -0.48
CPNE4-206ENST00000505957 TRIM50Q86XT4 487 aa12.08□□□□□ -0.48
CPNE4-206ENST00000505957 RNF135Q8IUD6 432 aa12.08□□□□□ -0.48
CPNE4-206ENST00000505957 BLIDQ8IZY5 108 aa12.08□□□□□ -0.48
CPNE4-206ENST00000505957 ENGASEQ8NFI3 743 aa12.08□□□□□ -0.48
CPNE4-206ENST00000505957 OXER1Q8TDS5 423 aa12.08□□□□□ -0.48
CPNE4-206ENST00000505957 EDAQ92838 391 aa12.08□□□□□ -0.48
CPNE4-206ENST00000505957 PPP2R3CQ969Q6 453 aa12.08□□□□□ -0.48
CPNE4-206ENST00000505957 ZMYND12Q9H0C1 365 aa12.08□□□□□ -0.48
CPNE4-206ENST00000505957 SEC63Q9UGP8 760 aaKnown RBP12.08□□□□□ -0.48
CPNE4-206ENST00000505957 MUTYHQ9UIF7 546 aa12.08□□□□□ -0.48
CPNE4-206ENST00000505957 CD207Q9UJ71 328 aa12.08□□□□□ -0.48
CPNE4-206ENST00000505957 PLAGL2Q9UPG8 496 aa12.08□□□□□ -0.48
CPNE4-206ENST00000505957 RALGAPA2Q2PPJ7 1873 aa12.08□□□□□ -0.48
CPNE4-206ENST00000505957 ZNF318Q5VUA4 2279 aa12.07□□□□□ -0.48
CPNE4-206ENST00000505957 SYCE3A1L190 88 aa12.07□□□□□ -0.48
CPNE4-206ENST00000505957 MBLAC1A4D2B0 266 aaPredicted RBP12.07□□□□□ -0.48
CPNE4-206ENST00000505957 PIK3CDO00329 1044 aa12.07□□□□□ -0.48
CPNE4-206ENST00000505957 CUTAO60888 179 aa12.07□□□□□ -0.48
CPNE4-206ENST00000505957 TBX10O75333 385 aa12.07□□□□□ -0.48
CPNE4-206ENST00000505957 DGKIO75912 1065 aa12.07□□□□□ -0.48
CPNE4-206ENST00000505957 GNA11P29992 359 aa12.07□□□□□ -0.48
CPNE4-206ENST00000505957 CEBPZQ03701 1054 aaKnown RBP12.07□□□□□ -0.48
CPNE4-206ENST00000505957 ORC2Q13416 577 aaPredicted RBP12.07□□□□□ -0.48
CPNE4-206ENST00000505957 SNW1Q13573 536 aaKnown RBP12.07□□□□□ -0.48
CPNE4-206ENST00000505957 CAMK1Q14012 370 aa12.07□□□□□ -0.48
CPNE4-206ENST00000505957 FBXO47Q5MNV8 452 aa12.07□□□□□ -0.48
CPNE4-206ENST00000505957 UTP14CQ5TAP6 766 aaKnown RBP12.07□□□□□ -0.48
CPNE4-206ENST00000505957 RUFY4Q6ZNE9 571 aa12.07□□□□□ -0.48
CPNE4-206ENST00000505957 TSHZ1Q6ZSZ6 1077 aa12.07□□□□□ -0.48
CPNE4-206ENST00000505957 NLRX1Q86UT6 975 aa12.07□□□□□ -0.48
CPNE4-206ENST00000505957 CRIPAKQ8N1N5 446 aa12.07□□□□□ -0.48
CPNE4-206ENST00000505957 ZNF579Q8NAF0 562 aaKnown RBP12.07□□□□□ -0.48
CPNE4-206ENST00000505957 MSLNLQ96KJ4 702 aa12.07□□□□□ -0.48
CPNE4-206ENST00000505957 FUCA2Q9BTY2 467 aa12.07□□□□□ -0.48
CPNE4-206ENST00000505957 GRPEL1Q9HAV7 217 aa12.07□□□□□ -0.48
CPNE4-206ENST00000505957 DACT1Q9NYF0 836 aa12.07□□□□□ -0.48
CPNE4-206ENST00000505957 SQORQ9Y6N5 450 aa12.07□□□□□ -0.48
CPNE4-206ENST00000505957 hCG_1642624A0A1W2PR95 340 aa12.06□□□□□ -0.48
CPNE4-206ENST00000505957 NR1I2O75469 434 aa12.06□□□□□ -0.48
CPNE4-206ENST00000505957 GTF2F1P35269 517 aaKnown RBP eCLIP12.06□□□□□ -0.48
CPNE4-206ENST00000505957 TCF7P36402 384 aaPredicted RBP12.06□□□□□ -0.48
CPNE4-206ENST00000505957 PPFIA1Q13136 1202 aa12.06□□□□□ -0.48
CPNE4-206ENST00000505957 CLUL1Q15846 466 aa12.06□□□□□ -0.48
CPNE4-206ENST00000505957 TYW1BQ6NUM6 668 aa12.06□□□□□ -0.48
CPNE4-206ENST00000505957 FAM43BQ6ZT52 329 aaPredicted RBP12.06□□□□□ -0.48
CPNE4-206ENST00000505957 ELOA2Q8IYF1 753 aaPredicted RBP12.06□□□□□ -0.48
CPNE4-206ENST00000505957 CMTR2Q8IYT2 770 aaKnown RBP12.06□□□□□ -0.48
CPNE4-206ENST00000505957 FMR1NBQ8N0W7 255 aaPredicted RBP12.06□□□□□ -0.48
CPNE4-206ENST00000505957 EFHBQ8N7U6 833 aa12.06□□□□□ -0.48
CPNE4-206ENST00000505957 KRI1Q8N9T8 703 aaKnown RBP12.06□□□□□ -0.48
CPNE4-206ENST00000505957 FSIP1Q8NA03 581 aa12.06□□□□□ -0.48
CPNE4-206ENST00000505957 SEPT1Q8WYJ6 367 aa12.06□□□□□ -0.48
CPNE4-206ENST00000505957 GPRASP2Q96D09 838 aa12.06□□□□□ -0.48
CPNE4-206ENST00000505957 CDHR1Q96JP9 859 aa12.06□□□□□ -0.48
CPNE4-206ENST00000505957 TIGD1Q96MW7 591 aa12.06□□□□□ -0.48
CPNE4-206ENST00000505957 PRRX2Q99811 253 aa12.06□□□□□ -0.48
CPNE4-206ENST00000505957 FTHL17Q9BXU8 183 aa12.06□□□□□ -0.48
CPNE4-206ENST00000505957 GLT8D2Q9H1C3 349 aa12.06□□□□□ -0.48
CPNE4-206ENST00000505957 TSPY26PQ9H489 355 aa12.06□□□□□ -0.48
CPNE4-206ENST00000505957 GOLPH3LQ9H4A5 285 aa12.06□□□□□ -0.48
CPNE4-206ENST00000505957 IGFLR1Q9H665 355 aa12.06□□□□□ -0.48
CPNE4-206ENST00000505957 ERAP1Q9NZ08 941 aa12.06□□□□□ -0.48
CPNE4-206ENST00000505957 TUBE1Q9UJT0 475 aa12.06□□□□□ -0.48
CPNE4-206ENST00000505957 HPSEQ9Y251 543 aa12.06□□□□□ -0.48
CPNE4-206ENST00000505957 TELO2Q9Y4R8 837 aa12.06□□□□□ -0.48
CPNE4-206ENST00000505957 NLRC5Q86WI3 1866 aa12.06□□□□□ -0.48
CPNE4-206ENST00000505957 MEIS2O14770 477 aa12.05□□□□□ -0.48
CPNE4-206ENST00000505957 LINC01565O15544 149 aa12.05□□□□□ -0.48
CPNE4-206ENST00000505957 NDUFV1P49821 464 aa12.05□□□□□ -0.48
CPNE4-206ENST00000505957 COASYQ13057 564 aa12.05□□□□□ -0.48
CPNE4-206ENST00000505957 CBX2Q14781 532 aaPredicted RBP12.05□□□□□ -0.48
CPNE4-206ENST00000505957 GRIK4Q16099 956 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms