RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 hCG_1984214I3L0E3 225 aa11.27□□□□□ -0.61
NEDD9-210ENST00000505589 PDE4AP27815 886 aa11.27□□□□□ -0.61
NEDD9-210ENST00000505589 LIFRP42702 1097 aa11.27□□□□□ -0.61
NEDD9-210ENST00000505589 ID4P47928 161 aa11.27□□□□□ -0.61
NEDD9-210ENST00000505589 TMEM266Q2M3C6 531 aa11.27□□□□□ -0.61
NEDD9-210ENST00000505589 PDXDC2PQ6P474 469 aa11.27□□□□□ -0.61
NEDD9-210ENST00000505589 SYCE2Q6PIF2 218 aa11.27□□□□□ -0.61
NEDD9-210ENST00000505589 NIPA1Q7RTP0 329 aa11.27□□□□□ -0.61
NEDD9-210ENST00000505589 PPFIBP1Q86W92 1011 aa11.27□□□□□ -0.61
NEDD9-210ENST00000505589 CKAP2LQ8IYA6 745 aa11.27□□□□□ -0.61
NEDD9-210ENST00000505589 KIAA0319LQ8IZA0 1049 aa11.27□□□□□ -0.61
NEDD9-210ENST00000505589 ZNF713Q8N859 430 aaPredicted RBP11.27□□□□□ -0.61
NEDD9-210ENST00000505589 TDRD5Q8NAT2 981 aaKnown RBP11.27□□□□□ -0.61
NEDD9-210ENST00000505589 BBXQ8WY36 941 aaPredicted RBP11.27□□□□□ -0.61
NEDD9-210ENST00000505589 BORCS6Q96GS4 357 aa11.27□□□□□ -0.61
NEDD9-210ENST00000505589 PCYT2Q99447 389 aa11.27□□□□□ -0.61
NEDD9-210ENST00000505589 CWH43Q9H720 699 aa11.27□□□□□ -0.61
NEDD9-210ENST00000505589 ZNF302Q9NR11 478 aa11.27□□□□□ -0.61
NEDD9-210ENST00000505589 DACT1Q9NYF0 836 aa11.27□□□□□ -0.61
NEDD9-210ENST00000505589 DPP7Q9UHL4 492 aa11.27□□□□□ -0.61
NEDD9-210ENST00000505589 DBR1Q9UK59 544 aaKnown RBP11.27□□□□□ -0.61
NEDD9-210ENST00000505589 TELO2Q9Y4R8 837 aa11.27□□□□□ -0.61
NEDD9-210ENST00000505589 SLC12A7Q9Y666 1083 aa11.27□□□□□ -0.61
NEDD9-210ENST00000505589 LAMA4Q16363 1823 aa11.27□□□□□ -0.61
NEDD9-210ENST00000505589 PRR23AA6NEV1 266 aa11.26□□□□□ -0.61
NEDD9-210ENST00000505589 MEIS1O00470 390 aa11.26□□□□□ -0.61
NEDD9-210ENST00000505589 CXCL14O95715 111 aa11.26□□□□□ -0.61
NEDD9-210ENST00000505589 SKIP12755 728 aa11.26□□□□□ -0.61
NEDD9-210ENST00000505589 AP3B2Q13367 1082 aa11.26□□□□□ -0.61
NEDD9-210ENST00000505589 NONOQ15233 471 aaKnown RBP eCLIP11.26□□□□□ -0.61
NEDD9-210ENST00000505589 LLGL2Q6P1M3 1020 aa11.26□□□□□ -0.61
NEDD9-210ENST00000505589 ELMSAN1Q6PJG2 1045 aa11.26□□□□□ -0.61
NEDD9-210ENST00000505589 ABHD15Q6UXT9 468 aa11.26□□□□□ -0.61
NEDD9-210ENST00000505589 OTOP3Q7RTS5 596 aa11.26□□□□□ -0.61
NEDD9-210ENST00000505589 SRBD1Q8N5C6 995 aaKnown RBP11.26□□□□□ -0.61
NEDD9-210ENST00000505589 METTL13Q8N6R0 699 aa11.26□□□□□ -0.61
NEDD9-210ENST00000505589 FANCBQ8NB91 859 aa11.26□□□□□ -0.61
NEDD9-210ENST00000505589 TMEM169Q96HH4 297 aa11.26□□□□□ -0.61
NEDD9-210ENST00000505589 MAP7D2Q96T17 732 aa11.26□□□□□ -0.61
NEDD9-210ENST00000505589 CYP26B1Q9NR63 512 aa11.26□□□□□ -0.61
NEDD9-210ENST00000505589 NRBP2Q9NSY0 501 aa11.26□□□□□ -0.61
NEDD9-210ENST00000505589 RBM28Q9NW13 759 aaKnown RBP11.26□□□□□ -0.61
NEDD9-210ENST00000505589 HCFC2Q9Y5Z7 792 aa11.26□□□□□ -0.61
NEDD9-210ENST00000505589 PTPRZ1P23471 2315 aaPredicted RBP11.26□□□□□ -0.61
NEDD9-210ENST00000505589 CA8P35219 290 aa11.25□□□□□ -0.61
NEDD9-210ENST00000505589 GATMP50440 423 aa11.25□□□□□ -0.61
NEDD9-210ENST00000505589 POLGP54098 1239 aaPredicted RBP11.25□□□□□ -0.61
NEDD9-210ENST00000505589 SWSAP1Q6NVH7 229 aa11.25□□□□□ -0.61
NEDD9-210ENST00000505589 PPP1R18Q6NYC8 613 aa11.25□□□□□ -0.61
NEDD9-210ENST00000505589 HEATR3Q7Z4Q2 680 aa11.25□□□□□ -0.61
NEDD9-210ENST00000505589 SMAP1Q8IYB5 467 aaPredicted RBP11.25□□□□□ -0.61
NEDD9-210ENST00000505589 VN1R2Q8NFZ6 395 aa11.25□□□□□ -0.61
NEDD9-210ENST00000505589 TRAPPC12Q8WVT3 735 aa11.25□□□□□ -0.61
NEDD9-210ENST00000505589 MAP4K1Q92918 833 aa11.25□□□□□ -0.61
NEDD9-210ENST00000505589 FAM167AQ96KS9 214 aa11.25□□□□□ -0.61
NEDD9-210ENST00000505589 CASD1Q96PB1 797 aa11.25□□□□□ -0.61
NEDD9-210ENST00000505589 INO80BQ9C086 356 aaPredicted RBP11.25□□□□□ -0.61
NEDD9-210ENST00000505589 LY9Q9HBG7 655 aa11.25□□□□□ -0.61
NEDD9-210ENST00000505589 AGO4Q9HCK5 861 aaKnown RBP11.25□□□□□ -0.61
NEDD9-210ENST00000505589 RIC8AQ9NPQ8 531 aa11.25□□□□□ -0.61
NEDD9-210ENST00000505589 CHST12Q9NRB3 414 aa11.25□□□□□ -0.61
NEDD9-210ENST00000505589 PCDHGC5Q9Y5F6 944 aa11.25□□□□□ -0.61
NEDD9-210ENST00000505589 IRAK3Q9Y616 596 aa11.25□□□□□ -0.61
NEDD9-210ENST00000505589 ZDBF2Q9HCK1 2354 aa11.24□□□□□ -0.61
NEDD9-210ENST00000505589 A0A0U1RQF3 1178 aa11.24□□□□□ -0.61
NEDD9-210ENST00000505589 C2orf71A6NGG8 1288 aa11.24□□□□□ -0.61
NEDD9-210ENST00000505589 SPDYE4A6NLX3 237 aa11.24□□□□□ -0.61
NEDD9-210ENST00000505589 HIDE1A8MVS5 230 aa11.24□□□□□ -0.61
NEDD9-210ENST00000505589 C2CD4DB7Z1M9 353 aa11.24□□□□□ -0.61
NEDD9-210ENST00000505589 MGEA5O60502 916 aa11.24□□□□□ -0.61
NEDD9-210ENST00000505589 BRD1O95696 1058 aa11.24□□□□□ -0.61
NEDD9-210ENST00000505589 PSAPP07602 524 aa11.24□□□□□ -0.61
NEDD9-210ENST00000505589 ARP10275 920 aa11.24□□□□□ -0.61
NEDD9-210ENST00000505589 EIF4BP23588 611 aaKnown RBP11.24□□□□□ -0.61
NEDD9-210ENST00000505589 NAPAP54920 295 aa11.24□□□□□ -0.61
NEDD9-210ENST00000505589 KIZQ2M2Z5 673 aa11.24□□□□□ -0.61
NEDD9-210ENST00000505589 KIAA1841Q6NSI8 718 aa11.24□□□□□ -0.61
NEDD9-210ENST00000505589 ZNF746Q6NUN9 644 aaPredicted RBP11.24□□□□□ -0.61
NEDD9-210ENST00000505589 CYP26C1Q6V0L0 522 aa11.24□□□□□ -0.61
NEDD9-210ENST00000505589 ASCL5Q7RTU5 278 aa11.24□□□□□ -0.61
NEDD9-210ENST00000505589 FAM228AQ86W67 206 aa11.24□□□□□ -0.61
NEDD9-210ENST00000505589 MB21D2Q8IYB1 491 aaPredicted RBP11.24□□□□□ -0.61
NEDD9-210ENST00000505589 OSMRQ99650 979 aa11.24□□□□□ -0.61
NEDD9-210ENST00000505589 POMKQ9H5K3 350 aa11.24□□□□□ -0.61
NEDD9-210ENST00000505589 SENP2Q9HC62 589 aa11.24□□□□□ -0.61
NEDD9-210ENST00000505589 LIMD1Q9UGP4 676 aa11.24□□□□□ -0.61
NEDD9-210ENST00000505589 AKT3Q9Y243 479 aa11.24□□□□□ -0.61
NEDD9-210ENST00000505589 SSX2IPQ9Y2D8 614 aa11.24□□□□□ -0.61
NEDD9-210ENST00000505589 PCDHA10Q9Y5I2 948 aa11.24□□□□□ -0.61
NEDD9-210ENST00000505589 MAFBQ9Y5Q3 323 aaPredicted RBP11.24□□□□□ -0.61
NEDD9-210ENST00000505589 MYO15AQ9UKN7 3530 aa11.24□□□□□ -0.61
NEDD9-210ENST00000505589 PRC1O43663 620 aa11.23□□□□□ -0.61
NEDD9-210ENST00000505589 GPR32O75388 356 aa11.23□□□□□ -0.61
NEDD9-210ENST00000505589 FGFR1P11362 822 aa11.23□□□□□ -0.61
NEDD9-210ENST00000505589 CHMLP26374 656 aa11.23□□□□□ -0.61
NEDD9-210ENST00000505589 NLRP11P59045 1033 aaKnown RBP11.23□□□□□ -0.61
NEDD9-210ENST00000505589 SETQ01105 290 aaPredicted RBP11.23□□□□□ -0.61
NEDD9-210ENST00000505589 APOBRQ0VD83 1088 aa11.23□□□□□ -0.61
NEDD9-210ENST00000505589 TDGQ13569 410 aa11.23□□□□□ -0.61
NEDD9-210ENST00000505589 DSC3Q14574 896 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms