RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 DPYDQ12882 1025 aa9.25□□□□□ -0.93
CDC42SE2-208ENST00000505065 GIT2Q14161 759 aa9.25□□□□□ -0.93
CDC42SE2-208ENST00000505065 MBTPS1Q14703 1052 aa9.25□□□□□ -0.93
CDC42SE2-208ENST00000505065 BRDTQ58F21 947 aaPredicted RBP9.25□□□□□ -0.93
CDC42SE2-208ENST00000505065 WNT8AQ9H1J5 351 aa9.25□□□□□ -0.93
CDC42SE2-208ENST00000505065 IFT122Q9HBG6 1241 aa9.25□□□□□ -0.93
CDC42SE2-208ENST00000505065 PROZP22891 400 aa9.25□□□□□ -0.93
CDC42SE2-208ENST00000505065 NDUFA8P51970 172 aa9.25□□□□□ -0.93
CDC42SE2-208ENST00000505065 GNL2Q13823 731 aaKnown RBP9.25□□□□□ -0.93
CDC42SE2-208ENST00000505065 DSC3Q14574 896 aa9.25□□□□□ -0.93
CDC42SE2-208ENST00000505065 TAF2Q6P1X5 1199 aa9.25□□□□□ -0.93
CDC42SE2-208ENST00000505065 NECAB2Q7Z6G3 386 aa9.25□□□□□ -0.93
CDC42SE2-208ENST00000505065 OLFML3Q9NRN5 406 aa9.25□□□□□ -0.93
CDC42SE2-208ENST00000505065 TUBE1Q9UJT0 475 aa9.25□□□□□ -0.93
CDC42SE2-208ENST00000505065 TRIP11Q15643 1979 aa9.25□□□□□ -0.93
CDC42SE2-208ENST00000505065 C17orf102A2RUQ5 167 aa9.25□□□□□ -0.93
CDC42SE2-208ENST00000505065 PARNO95453 639 aaKnown RBP9.25□□□□□ -0.93
CDC42SE2-208ENST00000505065 CTTNQ14247 550 aaKnown RBP9.25□□□□□ -0.93
CDC42SE2-208ENST00000505065 NFIL3Q16649 462 aa9.25□□□□□ -0.93
CDC42SE2-208ENST00000505065 SNX29Q8TEQ0 813 aa9.25□□□□□ -0.93
CDC42SE2-208ENST00000505065 RUSC1Q9BVN2 902 aa9.25□□□□□ -0.93
CDC42SE2-208ENST00000505065 ARHGAP28Q9P2N2 729 aa9.25□□□□□ -0.93
CDC42SE2-208ENST00000505065 GADD45BO75293 160 aaPredicted RBP9.24□□□□□ -0.93
CDC42SE2-208ENST00000505065 HSP90AA1P07900 732 aaKnown RBP9.24□□□□□ -0.93
CDC42SE2-208ENST00000505065 MARCKSP29966 332 aaPredicted RBP9.24□□□□□ -0.93
CDC42SE2-208ENST00000505065 FAM160A1Q05DH4 1040 aa9.24□□□□□ -0.93
CDC42SE2-208ENST00000505065 KCNB1Q14721 858 aa9.24□□□□□ -0.93
CDC42SE2-208ENST00000505065 STK38Q15208 465 aa9.24□□□□□ -0.93
CDC42SE2-208ENST00000505065 TAS1R3Q7RTX0 852 aa9.24□□□□□ -0.93
CDC42SE2-208ENST00000505065 ZNF410Q86VK4 478 aa9.24□□□□□ -0.93
CDC42SE2-208ENST00000505065 GPT2Q8TD30 523 aa9.24□□□□□ -0.93
CDC42SE2-208ENST00000505065 MRPS27Q92552 414 aaKnown RBP9.24□□□□□ -0.93
CDC42SE2-208ENST00000505065 NRBP2Q9NSY0 501 aa9.24□□□□□ -0.93
CDC42SE2-208ENST00000505065 DDX19AQ9NUU7 478 aaKnown RBP9.24□□□□□ -0.93
CDC42SE2-208ENST00000505065 STYXL1Q9Y6J8 313 aa9.24□□□□□ -0.93
CDC42SE2-208ENST00000505065 TRIM43BA6NCK2 446 aa9.24□□□□□ -0.93
CDC42SE2-208ENST00000505065 CHRNA1P02708 482 aa9.24□□□□□ -0.93
CDC42SE2-208ENST00000505065 CDC42EP1Q00587 391 aa9.24□□□□□ -0.93
CDC42SE2-208ENST00000505065 KRT79Q5XKE5 535 aa9.24□□□□□ -0.93
CDC42SE2-208ENST00000505065 TRIM43Q96BQ3 446 aaPredicted RBP9.24□□□□□ -0.93
CDC42SE2-208ENST00000505065 UBE4BO95155 1302 aa9.24□□□□□ -0.93
CDC42SE2-208ENST00000505065 TTC3P53804 2025 aa9.24□□□□□ -0.93
CDC42SE2-208ENST00000505065 NOP56O00567 594 aaKnown RBP9.24□□□□□ -0.93
CDC42SE2-208ENST00000505065 FAM189A1O60320 539 aa9.24□□□□□ -0.93
CDC42SE2-208ENST00000505065 MYL3P08590 195 aa9.24□□□□□ -0.93
CDC42SE2-208ENST00000505065 BMP8BP34820 402 aa9.24□□□□□ -0.93
CDC42SE2-208ENST00000505065 CSPP1Q1MSJ5 1256 aa9.24□□□□□ -0.93
CDC42SE2-208ENST00000505065 PAWRQ96IZ0 340 aaKnown RBP9.24□□□□□ -0.93
CDC42SE2-208ENST00000505065 TMEM134Q9H6X4 195 aa9.24□□□□□ -0.93
CDC42SE2-208ENST00000505065 TREHO43280 583 aa9.24□□□□□ -0.93
CDC42SE2-208ENST00000505065 PLA2G4BP0C869 781 aa9.24□□□□□ -0.93
CDC42SE2-208ENST00000505065 ITGB8P26012 769 aa9.24□□□□□ -0.93
CDC42SE2-208ENST00000505065 KARSQ15046 597 aaKnown RBP9.24□□□□□ -0.93
CDC42SE2-208ENST00000505065 IER5Q5VY09 327 aa9.24□□□□□ -0.93
CDC42SE2-208ENST00000505065 KRBA2Q6ZNG9 492 aa9.24□□□□□ -0.93
CDC42SE2-208ENST00000505065 CCDC73Q6ZRK6 1079 aa9.24□□□□□ -0.93
CDC42SE2-208ENST00000505065 OTUD6AQ7L8S5 288 aa9.24□□□□□ -0.93
CDC42SE2-208ENST00000505065 LARP4BQ92615 738 aaKnown RBP9.24□□□□□ -0.93
CDC42SE2-208ENST00000505065 GLT1D1Q96MS3 346 aa9.24□□□□□ -0.93
CDC42SE2-208ENST00000505065 TRIM9Q9C026 710 aa9.24□□□□□ -0.93
CDC42SE2-208ENST00000505065 PTPRHQ9HD43 1115 aa9.24□□□□□ -0.93
CDC42SE2-208ENST00000505065 KCNH3Q9ULD8 1083 aa9.24□□□□□ -0.93
CDC42SE2-208ENST00000505065 MYMKA6NI61 221 aa9.23□□□□□ -0.93
CDC42SE2-208ENST00000505065 ASAP2O43150 1006 aa9.23□□□□□ -0.93
CDC42SE2-208ENST00000505065 TFRCP02786 760 aaKnown RBP9.23□□□□□ -0.93
CDC42SE2-208ENST00000505065 GNAT1P11488 350 aa9.23□□□□□ -0.93
CDC42SE2-208ENST00000505065 CCT6AP40227 531 aaKnown RBP9.23□□□□□ -0.93
CDC42SE2-208ENST00000505065 GPC3P51654 580 aa9.23□□□□□ -0.93
CDC42SE2-208ENST00000505065 TET1Q8NFU7 2136 aa9.23□□□□□ -0.93
CDC42SE2-208ENST00000505065 BSNDQ8WZ55 320 aa9.23□□□□□ -0.93
CDC42SE2-208ENST00000505065 HVCN1Q96D96 273 aa9.23□□□□□ -0.93
CDC42SE2-208ENST00000505065 PAGE5Q96GU1 130 aa9.23□□□□□ -0.93
CDC42SE2-208ENST00000505065 JPH2Q9BR39 696 aaPredicted RBP9.23□□□□□ -0.93
CDC42SE2-208ENST00000505065 TMEM106CQ9BVX2 250 aa9.23□□□□□ -0.93
CDC42SE2-208ENST00000505065 RC3H2Q9HBD1 1191 aaKnown RBP9.23□□□□□ -0.93
CDC42SE2-208ENST00000505065 STARD7Q9NQZ5 370 aa9.23□□□□□ -0.93
CDC42SE2-208ENST00000505065 KIAA1024Q9UPX6 916 aa9.23□□□□□ -0.93
CDC42SE2-208ENST00000505065 PVALEFA0A1B0GWK0 134 aa9.23□□□□□ -0.93
CDC42SE2-208ENST00000505065 E9PMD0 336 aa9.23□□□□□ -0.93
CDC42SE2-208ENST00000505065 TIMP1P01033 207 aa9.23□□□□□ -0.93
CDC42SE2-208ENST00000505065 CKBP12277 381 aa9.23□□□□□ -0.93
CDC42SE2-208ENST00000505065 PPFIA1Q13136 1202 aa9.23□□□□□ -0.93
CDC42SE2-208ENST00000505065 EMC2Q15006 297 aa9.23□□□□□ -0.93
CDC42SE2-208ENST00000505065 TCTN1Q2MV58 587 aa9.23□□□□□ -0.93
CDC42SE2-208ENST00000505065 TRIM60Q495X7 471 aa9.23□□□□□ -0.93
CDC42SE2-208ENST00000505065 LONRF3Q496Y0 759 aa9.23□□□□□ -0.93
CDC42SE2-208ENST00000505065 FZD8Q9H461 694 aa9.23□□□□□ -0.93
CDC42SE2-208ENST00000505065 AZI2Q9H6S1 392 aa9.23□□□□□ -0.93
CDC42SE2-208ENST00000505065 PHLPP2Q6ZVD8 1323 aa9.23□□□□□ -0.93
CDC42SE2-208ENST00000505065 TMEM150BA6NC51 233 aa9.23□□□□□ -0.93
CDC42SE2-208ENST00000505065 DDX39AO00148 427 aaKnown RBP9.23□□□□□ -0.93
CDC42SE2-208ENST00000505065 GLRA2P23416 452 aa9.23□□□□□ -0.93
CDC42SE2-208ENST00000505065 CNGA1P29973 690 aa9.23□□□□□ -0.93
CDC42SE2-208ENST00000505065 HOXD13P35453 343 aa9.23□□□□□ -0.93
CDC42SE2-208ENST00000505065 ENPEPQ07075 957 aa9.23□□□□□ -0.93
CDC42SE2-208ENST00000505065 MCPH1Q8NEM0 835 aa9.23□□□□□ -0.93
CDC42SE2-208ENST00000505065 ERVK-5Q9HDB9 667 aa9.23□□□□□ -0.93
CDC42SE2-208ENST00000505065 SEL1LQ9UBV2 794 aa9.23□□□□□ -0.93
CDC42SE2-208ENST00000505065 ADGRA3Q8IWK6 1321 aa9.23□□□□□ -0.93
CDC42SE2-208ENST00000505065 GTF2BQ00403 316 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms