RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 HERVK_113P62684 666 aa7.07□□□□□ -1.28
DEPDC1B-203ENST00000505017 ST5P78524 1137 aa7.07□□□□□ -1.28
DEPDC1B-203ENST00000505017 AGBL4Q5VU57 503 aa7.07□□□□□ -1.28
DEPDC1B-203ENST00000505017 TRIM68Q6AZZ1 485 aa7.07□□□□□ -1.28
DEPDC1B-203ENST00000505017 IGFL4Q6B9Z1 124 aa7.07□□□□□ -1.28
DEPDC1B-203ENST00000505017 OVCH1Q7RTY7 1134 aa7.07□□□□□ -1.28
DEPDC1B-203ENST00000505017 C8orf37Q96NL8 207 aa7.07□□□□□ -1.28
DEPDC1B-203ENST00000505017 UCKL1Q9NWZ5 548 aa7.07□□□□□ -1.28
DEPDC1B-203ENST00000505017 NDOR1Q9UHB4 597 aa7.07□□□□□ -1.28
DEPDC1B-203ENST00000505017 CDC42EP3Q9UKI2 254 aa7.07□□□□□ -1.28
DEPDC1B-203ENST00000505017 OAZ3Q9UMX2 235 aa7.07□□□□□ -1.28
DEPDC1B-203ENST00000505017 TCAF1Q9Y4C2 921 aa7.07□□□□□ -1.28
DEPDC1B-203ENST00000505017 ITSN2Q9NZM3 1697 aa7.06□□□□□ -1.28
DEPDC1B-203ENST00000505017 TCOF1Q13428 1488 aaKnown RBP7.06□□□□□ -1.28
DEPDC1B-203ENST00000505017 PRAMEF25A6NGN4 478 aa7.06□□□□□ -1.28
DEPDC1B-203ENST00000505017 CD83Q01151 205 aa7.06□□□□□ -1.28
DEPDC1B-203ENST00000505017 EIF4HQ15056 248 aaKnown RBP7.06□□□□□ -1.28
DEPDC1B-203ENST00000505017 WDR72Q3MJ13 1102 aa7.06□□□□□ -1.28
DEPDC1B-203ENST00000505017 DPP8Q6V1X1 898 aaPredicted RBP7.06□□□□□ -1.28
DEPDC1B-203ENST00000505017 FGD2Q7Z6J4 655 aa7.06□□□□□ -1.28
DEPDC1B-203ENST00000505017 IFNL2Q8IZJ0 200 aa7.06□□□□□ -1.28
DEPDC1B-203ENST00000505017 ASB15Q8WXK1 588 aa7.06□□□□□ -1.28
DEPDC1B-203ENST00000505017 VPS11Q9H270 941 aa7.06□□□□□ -1.28
DEPDC1B-203ENST00000505017 PPP1R1BQ9UD71 204 aaPredicted RBP7.06□□□□□ -1.28
DEPDC1B-203ENST00000505017 ERCC6L2Q5T890 1561 aa7.06□□□□□ -1.28
DEPDC1B-203ENST00000505017 KIF14Q15058 1648 aa7.05□□□□□ -1.28
DEPDC1B-203ENST00000505017 PLEKHD1A6NEE1 506 aa7.05□□□□□ -1.28
DEPDC1B-203ENST00000505017 CR2P20023 1033 aa7.05□□□□□ -1.28
DEPDC1B-203ENST00000505017 KCNQ1P51787 676 aa7.05□□□□□ -1.28
DEPDC1B-203ENST00000505017 RAC3P60763 192 aa7.05□□□□□ -1.28
DEPDC1B-203ENST00000505017 NFYCQ13952 458 aa7.05□□□□□ -1.28
DEPDC1B-203ENST00000505017 LRP10Q7Z4F1 713 aa7.05□□□□□ -1.28
DEPDC1B-203ENST00000505017 ZFPM1Q8IX07 1006 aa7.05□□□□□ -1.28
DEPDC1B-203ENST00000505017 BCL6BQ8N143 479 aaPredicted RBP7.05□□□□□ -1.28
DEPDC1B-203ENST00000505017 GIMAP8Q8ND71 665 aaPredicted RBP7.05□□□□□ -1.28
DEPDC1B-203ENST00000505017 DLG3Q92796 817 aa7.05□□□□□ -1.28
DEPDC1B-203ENST00000505017 BTBD2Q9BX70 525 aa7.05□□□□□ -1.28
DEPDC1B-203ENST00000505017 CELF4Q9BZC1 486 aaKnown RBP7.05□□□□□ -1.28
DEPDC1B-203ENST00000505017 PTPN23Q9H3S7 1636 aa7.05□□□□□ -1.28
DEPDC1B-203ENST00000505017 SCDO00767 359 aa7.04□□□□□ -1.28
DEPDC1B-203ENST00000505017 KCNQ2O43526 872 aa7.04□□□□□ -1.28
DEPDC1B-203ENST00000505017 RAD17O75943 681 aa7.04□□□□□ -1.28
DEPDC1B-203ENST00000505017 ECE1P42892 770 aa7.04□□□□□ -1.28
DEPDC1B-203ENST00000505017 FAM47CQ5HY64 1035 aa7.04□□□□□ -1.28
DEPDC1B-203ENST00000505017 CATSPEREQ5SY80 951 aa7.04□□□□□ -1.28
DEPDC1B-203ENST00000505017 CXXC5Q7LFL8 322 aaKnown RBP7.04□□□□□ -1.28
DEPDC1B-203ENST00000505017 IPO9Q96P70 1041 aaKnown RBP7.04□□□□□ -1.28
DEPDC1B-203ENST00000505017 ADOQ96SZ5 270 aa7.04□□□□□ -1.28
DEPDC1B-203ENST00000505017 HIRIP3Q9BW71 556 aaPredicted RBP7.04□□□□□ -1.28
DEPDC1B-203ENST00000505017 SEMA4AQ9H3S1 761 aa7.04□□□□□ -1.28
DEPDC1B-203ENST00000505017 TRIM39Q9HCM9 518 aa7.04□□□□□ -1.28
DEPDC1B-203ENST00000505017 B3GALT1Q9Y5Z6 326 aa7.04□□□□□ -1.28
DEPDC1B-203ENST00000505017 KDM5BQ9UGL1 1544 aa7.04□□□□□ -1.28
DEPDC1B-203ENST00000505017 TCRBV16S1A1N1A0A5B0 115 aa7.03□□□□□ -1.28
DEPDC1B-203ENST00000505017 HMGCRP04035 888 aa7.03□□□□□ -1.28
DEPDC1B-203ENST00000505017 TMEM200BQ69YZ2 307 aa7.03□□□□□ -1.28
DEPDC1B-203ENST00000505017 BRAPQ7Z569 592 aa7.03□□□□□ -1.28
DEPDC1B-203ENST00000505017 LILRB2Q8N423 598 aa7.03□□□□□ -1.28
DEPDC1B-203ENST00000505017 EDAQ92838 391 aa7.03□□□□□ -1.28
DEPDC1B-203ENST00000505017 ARMC5Q96C12 935 aa7.03□□□□□ -1.28
DEPDC1B-203ENST00000505017 PLA2G12BQ9BX93 195 aa7.03□□□□□ -1.28
DEPDC1B-203ENST00000505017 SLC30A1Q9Y6M5 507 aa7.03□□□□□ -1.28
DEPDC1B-203ENST00000505017 AKNAQ7Z591 1439 aa7.02□□□□□ -1.29
DEPDC1B-203ENST00000505017 GSTA4O15217 222 aa7.02□□□□□ -1.29
DEPDC1B-203ENST00000505017 ARHGAP6O43182 974 aa7.02□□□□□ -1.29
DEPDC1B-203ENST00000505017 ZBTB48P10074 688 aaPredicted RBP7.02□□□□□ -1.29
DEPDC1B-203ENST00000505017 NAT1P18440 290 aa7.02□□□□□ -1.29
DEPDC1B-203ENST00000505017 COMTP21964 271 aa7.02□□□□□ -1.29
DEPDC1B-203ENST00000505017 HGFACQ04756 655 aa7.02□□□□□ -1.29
DEPDC1B-203ENST00000505017 PCOLCEQ15113 449 aa7.02□□□□□ -1.29
DEPDC1B-203ENST00000505017 GPR135Q8IZ08 494 aa7.02□□□□□ -1.29
DEPDC1B-203ENST00000505017 EXTL1Q92935 676 aa7.02□□□□□ -1.29
DEPDC1B-203ENST00000505017 SCYL1Q96KG9 808 aa7.02□□□□□ -1.29
DEPDC1B-203ENST00000505017 GBP4Q96PP9 640 aa7.02□□□□□ -1.29
DEPDC1B-203ENST00000505017 OR10A5Q9H207 317 aa7.02□□□□□ -1.29
DEPDC1B-203ENST00000505017 KCNH7Q9NS40 1196 aa7.02□□□□□ -1.29
DEPDC1B-203ENST00000505017 SRRDQ9UH36 339 aa7.02□□□□□ -1.29
DEPDC1B-203ENST00000505017 ING1Q9UK53 422 aaPredicted RBP7.02□□□□□ -1.29
DEPDC1B-203ENST00000505017 NR2E1Q9Y466 385 aa7.02□□□□□ -1.29
DEPDC1B-203ENST00000505017 ABCC10Q5T3U5 1492 aa7.02□□□□□ -1.29
DEPDC1B-203ENST00000505017 CLSPNQ9HAW4 1339 aa7.01□□□□□ -1.29
DEPDC1B-203ENST00000505017 ZCCHC11Q5TAX3 1644 aaKnown RBP7.01□□□□□ -1.29
DEPDC1B-203ENST00000505017 PRAMEF22A3QJZ6 481 aa7.01□□□□□ -1.29
DEPDC1B-203ENST00000505017 CDC14BO60729 498 aa7.01□□□□□ -1.29
DEPDC1B-203ENST00000505017 ACO1P21399 889 aaKnown RBP7.01□□□□□ -1.29
DEPDC1B-203ENST00000505017 KLF10Q13118 480 aa7.01□□□□□ -1.29
DEPDC1B-203ENST00000505017 MOGSQ13724 837 aa7.01□□□□□ -1.29
DEPDC1B-203ENST00000505017 FAM50AQ14320 339 aaKnown RBP7.01□□□□□ -1.29
DEPDC1B-203ENST00000505017 PRKD1Q15139 912 aaPredicted RBP7.01□□□□□ -1.29
DEPDC1B-203ENST00000505017 ZMAT1Q5H9K5 638 aa7.01□□□□□ -1.29
DEPDC1B-203ENST00000505017 ZC3H12BQ5HYM0 836 aaKnown RBP7.01□□□□□ -1.29
DEPDC1B-203ENST00000505017 MAMDC4Q6UXC1 1216 aa7.01□□□□□ -1.29
DEPDC1B-203ENST00000505017 RNF207Q6ZRF8 634 aa7.01□□□□□ -1.29
DEPDC1B-203ENST00000505017 FILIP1Q7Z7B0 1213 aa7.01□□□□□ -1.29
DEPDC1B-203ENST00000505017 FOXRED1Q96CU9 486 aaPredicted RBP7.01□□□□□ -1.29
DEPDC1B-203ENST00000505017 ZNF503Q96F45 646 aa7.01□□□□□ -1.29
DEPDC1B-203ENST00000505017 MAGEB10Q96LZ2 347 aaPredicted RBP7.01□□□□□ -1.29
DEPDC1B-203ENST00000505017 PCED1AQ9H1Q7 454 aa7.01□□□□□ -1.29
DEPDC1B-203ENST00000505017 AGO3Q9H9G7 860 aaKnown RBP7.01□□□□□ -1.29
DEPDC1B-203ENST00000505017 HECAQ9UBI9 543 aaPredicted RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms