RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 ADAMTS3O15072 1205 aa10.99□□□□□ -0.65
NR1I3-220ENST00000505005 HOXA2O43364 376 aa10.99□□□□□ -0.65
NR1I3-220ENST00000505005 RPS6KA5O75582 802 aa10.99□□□□□ -0.65
NR1I3-220ENST00000505005 C22orf31O95567 290 aa10.99□□□□□ -0.65
NR1I3-220ENST00000505005 ATP2A2P16615 1042 aaKnown RBP10.99□□□□□ -0.65
NR1I3-220ENST00000505005 ATP4AP20648 1035 aa10.99□□□□□ -0.65
NR1I3-220ENST00000505005 SFPQP23246 707 aaKnown RBP eCLIP10.99□□□□□ -0.65
NR1I3-220ENST00000505005 LONP1P36776 959 aaKnown RBP10.99□□□□□ -0.65
NR1I3-220ENST00000505005 ZNF200P98182 395 aaPredicted RBP10.99□□□□□ -0.65
NR1I3-220ENST00000505005 ATP2C1P98194 919 aaPredicted RBP10.99□□□□□ -0.65
NR1I3-220ENST00000505005 SPIRE1Q08AE8 756 aa10.99□□□□□ -0.65
NR1I3-220ENST00000505005 PAK2Q13177 524 aa10.99□□□□□ -0.65
NR1I3-220ENST00000505005 PPP2R5AQ15172 486 aa10.99□□□□□ -0.65
NR1I3-220ENST00000505005 MTERF2Q49AM1 385 aa10.99□□□□□ -0.65
NR1I3-220ENST00000505005 EARS2Q5JPH6 523 aaKnown RBP10.99□□□□□ -0.65
NR1I3-220ENST00000505005 ZNF697Q5TEC3 545 aa10.99□□□□□ -0.65
NR1I3-220ENST00000505005 OTOP2Q7RTS6 562 aa10.99□□□□□ -0.65
NR1I3-220ENST00000505005 KIAA0319LQ8IZA0 1049 aa10.99□□□□□ -0.65
NR1I3-220ENST00000505005 IGSF22Q8N9C0 903 aa10.99□□□□□ -0.65
NR1I3-220ENST00000505005 PSPC1Q8WXF1 523 aaKnown RBP10.99□□□□□ -0.65
NR1I3-220ENST00000505005 DHX38Q92620 1227 aaKnown RBP10.99□□□□□ -0.65
NR1I3-220ENST00000505005 CALML4Q96GE6 196 aa10.99□□□□□ -0.65
NR1I3-220ENST00000505005 SCLT1Q96NL6 688 aa10.99□□□□□ -0.65
NR1I3-220ENST00000505005 SAMD11Q96NU1 681 aa10.99□□□□□ -0.65
NR1I3-220ENST00000505005 CTAGE1Q96RT6 745 aa10.99□□□□□ -0.65
NR1I3-220ENST00000505005 MTRQ99707 1265 aa10.99□□□□□ -0.65
NR1I3-220ENST00000505005 ZBED2Q9BTP6 218 aa10.99□□□□□ -0.65
NR1I3-220ENST00000505005 FAM49AQ9H0Q0 323 aaPredicted RBP10.99□□□□□ -0.65
NR1I3-220ENST00000505005 SUGCTQ9HAC7 445 aa10.99□□□□□ -0.65
NR1I3-220ENST00000505005 SLC28A3Q9HAS3 691 aa10.99□□□□□ -0.65
NR1I3-220ENST00000505005 INSL6Q9Y581 213 aa10.99□□□□□ -0.65
NR1I3-220ENST00000505005 CDY2AQ9Y6F7 541 aa10.99□□□□□ -0.65
NR1I3-220ENST00000505005 IGKV6-21A0A0C4DH24 114 aa10.98□□□□□ -0.65
NR1I3-220ENST00000505005 ZNF862O60290 1169 aa10.98□□□□□ -0.65
NR1I3-220ENST00000505005 EIF4BP23588 611 aaKnown RBP10.98□□□□□ -0.65
NR1I3-220ENST00000505005 CCT6AP40227 531 aaKnown RBP10.98□□□□□ -0.65
NR1I3-220ENST00000505005 UBA7P41226 1012 aa10.98□□□□□ -0.65
NR1I3-220ENST00000505005 MGAT3Q09327 533 aa10.98□□□□□ -0.65
NR1I3-220ENST00000505005 FBXO47Q5MNV8 452 aa10.98□□□□□ -0.65
NR1I3-220ENST00000505005 APBB1IPQ7Z5R6 666 aaPredicted RBP10.98□□□□□ -0.65
NR1I3-220ENST00000505005 SRGAP1Q7Z6B7 1085 aa10.98□□□□□ -0.65
NR1I3-220ENST00000505005 BANK1Q8NDB2 785 aa10.98□□□□□ -0.65
NR1I3-220ENST00000505005 DBF4BQ8NFT6 615 aa10.98□□□□□ -0.65
NR1I3-220ENST00000505005 DYDC2Q96IM9 177 aa10.98□□□□□ -0.65
NR1I3-220ENST00000505005 RAD9AQ99638 391 aa10.98□□□□□ -0.65
NR1I3-220ENST00000505005 PYM1Q9BRP8 204 aaKnown RBP10.98□□□□□ -0.65
NR1I3-220ENST00000505005 DHX33Q9H6R0 707 aaKnown RBP10.98□□□□□ -0.65
NR1I3-220ENST00000505005 C17orf75Q9HAS0 396 aa10.98□□□□□ -0.65
NR1I3-220ENST00000505005 ATP6V0A4Q9HBG4 840 aa10.98□□□□□ -0.65
NR1I3-220ENST00000505005 CCDC39Q9UFE4 941 aa10.98□□□□□ -0.65
NR1I3-220ENST00000505005 EVPLQ92817 2033 aa10.97□□□□□ -0.65
NR1I3-220ENST00000505005 ARHGEF35A5YM69 484 aa10.97□□□□□ -0.65
NR1I3-220ENST00000505005 H0YCG3 227 aa10.97□□□□□ -0.65
NR1I3-220ENST00000505005 EML1O00423 815 aa10.97□□□□□ -0.65
NR1I3-220ENST00000505005 NBNO60934 754 aa10.97□□□□□ -0.65
NR1I3-220ENST00000505005 CHRNA1P02708 482 aa10.97□□□□□ -0.65
NR1I3-220ENST00000505005 ACRP10323 421 aa10.97□□□□□ -0.65
NR1I3-220ENST00000505005 AXLP30530 894 aa10.97□□□□□ -0.65
NR1I3-220ENST00000505005 ANO5Q75V66 913 aa10.97□□□□□ -0.65
NR1I3-220ENST00000505005 C16orf59Q7L2K0 433 aa10.97□□□□□ -0.65
NR1I3-220ENST00000505005 CATSPER3Q86XQ3 398 aa10.97□□□□□ -0.65
NR1I3-220ENST00000505005 HACE1Q8IYU2 909 aa10.97□□□□□ -0.65
NR1I3-220ENST00000505005 PLCD3Q8N3E9 789 aa10.97□□□□□ -0.65
NR1I3-220ENST00000505005 SLC17A8Q8NDX2 589 aa10.97□□□□□ -0.65
NR1I3-220ENST00000505005 CNNM3Q8NE01 707 aa10.97□□□□□ -0.65
NR1I3-220ENST00000505005 NLRP7Q8WX94 980 aa10.97□□□□□ -0.65
NR1I3-220ENST00000505005 KIFAP3Q92845 792 aa10.97□□□□□ -0.65
NR1I3-220ENST00000505005 IFT74Q96LB3 600 aa10.97□□□□□ -0.65
NR1I3-220ENST00000505005 NFKBIZQ9BYH8 718 aa10.97□□□□□ -0.65
NR1I3-220ENST00000505005 LRRC27Q9C0I9 530 aa10.97□□□□□ -0.65
NR1I3-220ENST00000505005 C2orf40Q9H1Z8 148 aa10.97□□□□□ -0.65
NR1I3-220ENST00000505005 SUCLA2Q9P2R7 463 aaPredicted RBP10.97□□□□□ -0.65
NR1I3-220ENST00000505005 PCDHB6Q9Y5E3 794 aa10.97□□□□□ -0.65
NR1I3-220ENST00000505005 UMODL1Q5DID0 1318 aa10.97□□□□□ -0.65
NR1I3-220ENST00000505005 DENND3A2RUS2 1198 aa10.96□□□□□ -0.65
NR1I3-220ENST00000505005 FAM205CA6NFA0 338 aa10.96□□□□□ -0.65
NR1I3-220ENST00000505005 ZBTB42B2RXF5 422 aa10.96□□□□□ -0.65
NR1I3-220ENST00000505005 TLL1O43897 1013 aa10.96□□□□□ -0.65
NR1I3-220ENST00000505005 CTSHP09668 335 aa10.96□□□□□ -0.65
NR1I3-220ENST00000505005 PHKA2P46019 1235 aa10.96□□□□□ -0.65
NR1I3-220ENST00000505005 TOB1P50616 345 aaPredicted RBP10.96□□□□□ -0.65
NR1I3-220ENST00000505005 FXR1P51114 621 aaKnown RBP eCLIP10.96□□□□□ -0.65
NR1I3-220ENST00000505005 RAB27AP51159 221 aa10.96□□□□□ -0.65
NR1I3-220ENST00000505005 NLRP11P59045 1033 aaKnown RBP10.96□□□□□ -0.65
NR1I3-220ENST00000505005 WDR5P61964 334 aaKnown RBP10.96□□□□□ -0.65
NR1I3-220ENST00000505005 CYP4A11Q02928 519 aa10.96□□□□□ -0.65
NR1I3-220ENST00000505005 CTTNQ14247 550 aaKnown RBP10.96□□□□□ -0.65
NR1I3-220ENST00000505005 SF3A1Q15459 793 aaKnown RBP10.96□□□□□ -0.65
NR1I3-220ENST00000505005 C9orf50Q5SZB4 431 aa10.96□□□□□ -0.65
NR1I3-220ENST00000505005 TRAF7Q6Q0C0 670 aa10.96□□□□□ -0.65
NR1I3-220ENST00000505005 SLC24A5Q71RS6 500 aa10.96□□□□□ -0.65
NR1I3-220ENST00000505005 TRMT1LQ7Z2T5 733 aaKnown RBP10.96□□□□□ -0.65
NR1I3-220ENST00000505005 HERC6Q8IVU3 1022 aa10.96□□□□□ -0.65
NR1I3-220ENST00000505005 C4orf32Q8N8J7 132 aa10.96□□□□□ -0.65
NR1I3-220ENST00000505005 RASSF8Q8NHQ8 419 aa10.96□□□□□ -0.65
NR1I3-220ENST00000505005 SNX29Q8TEQ0 813 aa10.96□□□□□ -0.65
NR1I3-220ENST00000505005 TOP1MTQ969P6 601 aa10.96□□□□□ -0.65
NR1I3-220ENST00000505005 CCDC51Q96ER9 411 aa10.96□□□□□ -0.65
NR1I3-220ENST00000505005 CCDC34Q96HJ3 373 aa10.96□□□□□ -0.65
NR1I3-220ENST00000505005 IPO9Q96P70 1041 aaKnown RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms