RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 HEATR3Q7Z4Q2 680 aa7.87□□□□□ -1.15
NPIPB3-203ENST00000504841 SMC5Q8IY18 1101 aa7.87□□□□□ -1.15
NPIPB3-203ENST00000504841 ABI1Q8IZP0 508 aa7.87□□□□□ -1.15
NPIPB3-203ENST00000504841 CCDC82Q8N4S0 544 aa7.87□□□□□ -1.15
NPIPB3-203ENST00000504841 SRBD1Q8N5C6 995 aaKnown RBP7.87□□□□□ -1.15
NPIPB3-203ENST00000504841 TDRD5Q8NAT2 981 aaKnown RBP7.87□□□□□ -1.15
NPIPB3-203ENST00000504841 FLCNQ8NFG4 579 aa7.87□□□□□ -1.15
NPIPB3-203ENST00000504841 CYP2W1Q8TAV3 490 aa7.87□□□□□ -1.15
NPIPB3-203ENST00000504841 CASP10Q92851 521 aa7.87□□□□□ -1.15
NPIPB3-203ENST00000504841 NKD2Q969F2 451 aaPredicted RBP7.87□□□□□ -1.15
NPIPB3-203ENST00000504841 ZNF558Q96NG5 402 aa7.87□□□□□ -1.15
NPIPB3-203ENST00000504841 RWDD1Q9H446 243 aaPredicted RBP7.87□□□□□ -1.15
NPIPB3-203ENST00000504841 OSBPL3Q9H4L5 887 aa7.87□□□□□ -1.15
NPIPB3-203ENST00000504841 RGS18Q9NS28 235 aa7.87□□□□□ -1.15
NPIPB3-203ENST00000504841 KCNH7Q9NS40 1196 aa7.87□□□□□ -1.15
NPIPB3-203ENST00000504841 ST3GAL5Q9UNP4 418 aa7.87□□□□□ -1.15
NPIPB3-203ENST00000504841 HCFC2Q9Y5Z7 792 aa7.87□□□□□ -1.15
NPIPB3-203ENST00000504841 CCDC69A6NI79 296 aa7.86□□□□□ -1.15
NPIPB3-203ENST00000504841 PROB1E7EW31 1015 aa7.86□□□□□ -1.15
NPIPB3-203ENST00000504841 GPR182O15218 404 aa7.86□□□□□ -1.15
NPIPB3-203ENST00000504841 IGHDP01880 384 aa7.86□□□□□ -1.15
NPIPB3-203ENST00000504841 VTNP04004 478 aa7.86□□□□□ -1.15
NPIPB3-203ENST00000504841 HOXB8P17481 243 aaPredicted RBP7.86□□□□□ -1.15
NPIPB3-203ENST00000504841 PPM1AP35813 382 aa7.86□□□□□ -1.15
NPIPB3-203ENST00000504841 METAP2P50579 478 aaKnown RBP eCLIP7.86□□□□□ -1.15
NPIPB3-203ENST00000504841 NUCB1Q02818 461 aa7.86□□□□□ -1.15
NPIPB3-203ENST00000504841 KRT17Q04695 432 aa7.86□□□□□ -1.15
NPIPB3-203ENST00000504841 KCNC3Q14003 757 aa7.86□□□□□ -1.15
NPIPB3-203ENST00000504841 ODR4Q5SWX8 454 aa7.86□□□□□ -1.15
NPIPB3-203ENST00000504841 RARS2Q5T160 578 aaKnown RBP7.86□□□□□ -1.15
NPIPB3-203ENST00000504841 KANK3Q6NY19 840 aa7.86□□□□□ -1.15
NPIPB3-203ENST00000504841 PDXDC2PQ6P474 469 aa7.86□□□□□ -1.15
NPIPB3-203ENST00000504841 CASC1Q6TDU7 716 aa7.86□□□□□ -1.15
NPIPB3-203ENST00000504841 KCNT2Q6UVM3 1135 aa7.86□□□□□ -1.15
NPIPB3-203ENST00000504841 TMEM184AQ6ZMB5 413 aa7.86□□□□□ -1.15
NPIPB3-203ENST00000504841 PLPPR4Q7Z2D5 763 aa7.86□□□□□ -1.15
NPIPB3-203ENST00000504841 FAM228AQ86W67 206 aa7.86□□□□□ -1.15
NPIPB3-203ENST00000504841 CKAP2LQ8IYA6 745 aa7.86□□□□□ -1.15
NPIPB3-203ENST00000504841 UBALD2Q8IYN6 164 aa7.86□□□□□ -1.15
NPIPB3-203ENST00000504841 LRRC43Q8N309 656 aa7.86□□□□□ -1.15
NPIPB3-203ENST00000504841 NME8Q8N427 588 aa7.86□□□□□ -1.15
NPIPB3-203ENST00000504841 METTL13Q8N6R0 699 aa7.86□□□□□ -1.15
NPIPB3-203ENST00000504841 C12orf76Q8N812 135 aaPredicted RBP7.86□□□□□ -1.15
NPIPB3-203ENST00000504841 IGDCC4Q8TDY8 1250 aa7.86□□□□□ -1.15
NPIPB3-203ENST00000504841 ZNF668Q96K58 619 aaPredicted RBP7.86□□□□□ -1.15
NPIPB3-203ENST00000504841 MXRA8Q9BRK3 442 aa7.86□□□□□ -1.15
NPIPB3-203ENST00000504841 LZTS2Q9BRK4 669 aa7.86□□□□□ -1.15
NPIPB3-203ENST00000504841 TMEM117Q9H0C3 514 aa7.86□□□□□ -1.15
NPIPB3-203ENST00000504841 CWH43Q9H720 699 aa7.86□□□□□ -1.15
NPIPB3-203ENST00000504841 LY9Q9HBG7 655 aa7.86□□□□□ -1.15
NPIPB3-203ENST00000504841 NGRNQ9NPE2 291 aaKnown RBP7.86□□□□□ -1.15
NPIPB3-203ENST00000504841 TMEM161AQ9NX61 479 aa7.86□□□□□ -1.15
NPIPB3-203ENST00000504841 METRNQ9UJH8 293 aa7.86□□□□□ -1.15
NPIPB3-203ENST00000504841 DBR1Q9UK59 544 aaKnown RBP7.86□□□□□ -1.15
NPIPB3-203ENST00000504841 LZTS1Q9Y250 596 aa7.86□□□□□ -1.15
NPIPB3-203ENST00000504841 CACNA1HO95180 2353 aa7.86□□□□□ -1.15
NPIPB3-203ENST00000504841 NFASCO94856 1347 aa7.85□□□□□ -1.15
NPIPB3-203ENST00000504841 NT5C1B-RDH14C9J2C7 533 aa7.85□□□□□ -1.15
NPIPB3-203ENST00000504841 MAFGO15525 162 aa7.85□□□□□ -1.15
NPIPB3-203ENST00000504841 PRC1O43663 620 aa7.85□□□□□ -1.15
NPIPB3-203ENST00000504841 HBP1O60381 514 aa7.85□□□□□ -1.15
NPIPB3-203ENST00000504841 CLASP2O75122 1294 aaKnown RBP7.85□□□□□ -1.15
NPIPB3-203ENST00000504841 GSPT1P15170 499 aaKnown RBP7.85□□□□□ -1.15
NPIPB3-203ENST00000504841 ZNF76P36508 570 aa7.85□□□□□ -1.15
NPIPB3-203ENST00000504841 NBL1P41271 181 aa7.85□□□□□ -1.15
NPIPB3-203ENST00000504841 ID4P47928 161 aa7.85□□□□□ -1.15
NPIPB3-203ENST00000504841 GNAQP50148 359 aa7.85□□□□□ -1.15
NPIPB3-203ENST00000504841 PLCB3Q01970 1234 aa7.85□□□□□ -1.15
NPIPB3-203ENST00000504841 ITGB3BPQ13352 177 aaPredicted RBP7.85□□□□□ -1.15
NPIPB3-203ENST00000504841 SMC1AQ14683 1233 aaKnown RBP7.85□□□□□ -1.15
NPIPB3-203ENST00000504841 FAM160B1Q5W0V3 765 aa7.85□□□□□ -1.15
NPIPB3-203ENST00000504841 MCTP2Q6DN12 878 aa7.85□□□□□ -1.15
NPIPB3-203ENST00000504841 LRRC55Q6ZSA7 311 aa7.85□□□□□ -1.15
NPIPB3-203ENST00000504841 MICU3Q86XE3 530 aa7.85□□□□□ -1.15
NPIPB3-203ENST00000504841 CCDC60Q8IWA6 550 aaPredicted RBP7.85□□□□□ -1.15
NPIPB3-203ENST00000504841 MB21D2Q8IYB1 491 aaPredicted RBP7.85□□□□□ -1.15
NPIPB3-203ENST00000504841 KIAA0319LQ8IZA0 1049 aa7.85□□□□□ -1.15
NPIPB3-203ENST00000504841 ADSSL1Q8N142 457 aa7.85□□□□□ -1.15
NPIPB3-203ENST00000504841 TMEM87AQ8NBN3 555 aa7.85□□□□□ -1.15
NPIPB3-203ENST00000504841 RASGRP4Q8TDF6 673 aa7.85□□□□□ -1.15
NPIPB3-203ENST00000504841 RUFY2Q8WXA3 655 aa7.85□□□□□ -1.15
NPIPB3-203ENST00000504841 SCLT1Q96NL6 688 aa7.85□□□□□ -1.15
NPIPB3-203ENST00000504841 NECTIN4Q96NY8 510 aa7.85□□□□□ -1.15
NPIPB3-203ENST00000504841 ANO3Q9BYT9 981 aa7.85□□□□□ -1.15
NPIPB3-203ENST00000504841 ADAM7Q9H2U9 754 aa7.85□□□□□ -1.15
NPIPB3-203ENST00000504841 AGO4Q9HCK5 861 aaKnown RBP7.85□□□□□ -1.15
NPIPB3-203ENST00000504841 ZNF302Q9NR11 478 aa7.85□□□□□ -1.15
NPIPB3-203ENST00000504841 SPG21Q9NZD8 308 aa7.85□□□□□ -1.15
NPIPB3-203ENST00000504841 LIMD1Q9UGP4 676 aa7.85□□□□□ -1.15
NPIPB3-203ENST00000504841 PTPRZ1P23471 2315 aaPredicted RBP7.85□□□□□ -1.15
NPIPB3-203ENST00000504841 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.84□□□□□ -1.15
NPIPB3-203ENST00000504841 C2orf71A6NGG8 1288 aa7.84□□□□□ -1.15
NPIPB3-203ENST00000504841 SH2B2O14492 632 aaPredicted RBP7.84□□□□□ -1.15
NPIPB3-203ENST00000504841 HOXA2O43364 376 aa7.84□□□□□ -1.15
NPIPB3-203ENST00000504841 CCNE2O96020 404 aa7.84□□□□□ -1.15
NPIPB3-203ENST00000504841 SMARCA1P28370 1054 aa7.84□□□□□ -1.15
NPIPB3-203ENST00000504841 MTHFRP42898 656 aa7.84□□□□□ -1.15
NPIPB3-203ENST00000504841 SLC26A2P50443 739 aa7.84□□□□□ -1.15
NPIPB3-203ENST00000504841 CLCN3P51790 818 aa7.84□□□□□ -1.15
NPIPB3-203ENST00000504841 CRYBB1P53674 252 aaPredicted RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms