RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 FAM43BQ6ZT52 329 aaPredicted RBP28.52■■■□□ 2.16
PVT1-201ENST00000504719 ATXN2LQ8WWM7 1075 aaKnown RBP28.52■■■□□ 2.16
PVT1-201ENST00000504719 PPP1R16BQ96T49 567 aa28.52■■■□□ 2.16
PVT1-201ENST00000504719 VAV3Q9UKW4 847 aa28.52■■■□□ 2.16
PVT1-201ENST00000504719 TBX3O15119 743 aa28.51■■■□□ 2.15
PVT1-201ENST00000504719 MMP1P03956 469 aa28.51■■■□□ 2.15
PVT1-201ENST00000504719 TMOD1P28289 359 aa28.51■■■□□ 2.15
PVT1-201ENST00000504719 MCM2P49736 904 aa28.51■■■□□ 2.15
PVT1-201ENST00000504719 NFX1Q12986 1120 aaKnown RBP28.51■■■□□ 2.15
PVT1-201ENST00000504719 TARBP2Q15633 366 aaKnown RBP28.51■■■□□ 2.15
PVT1-201ENST00000504719 XKR3Q5GH77 459 aa28.51■■■□□ 2.15
PVT1-201ENST00000504719 CRIPAKQ8N1N5 446 aa28.51■■■□□ 2.15
PVT1-201ENST00000504719 HAS1Q92839 578 aa28.51■■■□□ 2.15
PVT1-201ENST00000504719 ZNF689Q96CS4 500 aaPredicted RBP28.51■■■□□ 2.15
PVT1-201ENST00000504719 TMX3Q96JJ7 454 aa28.51■■■□□ 2.15
PVT1-201ENST00000504719 OSMRQ99650 979 aa28.51■■■□□ 2.15
PVT1-201ENST00000504719 NIFKQ9BYG3 293 aaKnown RBP28.51■■■□□ 2.15
PVT1-201ENST00000504719 EML1O00423 815 aa28.5■■■□□ 2.15
PVT1-201ENST00000504719 ODR4Q5SWX8 454 aa28.5■■■□□ 2.15
PVT1-201ENST00000504719 TMEM192Q8IY95 271 aa28.5■■■□□ 2.15
PVT1-201ENST00000504719 LRRC71Q8N4P6 559 aa28.5■■■□□ 2.15
PVT1-201ENST00000504719 FIBCD1Q8N539 461 aa28.5■■■□□ 2.15
PVT1-201ENST00000504719 AKT3Q9Y243 479 aa28.5■■■□□ 2.15
PVT1-201ENST00000504719 ADGRA3Q8IWK6 1321 aa28.49■■■□□ 2.15
PVT1-201ENST00000504719 BTBD18B2RXH4 712 aa28.49■■■□□ 2.15
PVT1-201ENST00000504719 DGKIO75912 1065 aa28.49■■■□□ 2.15
PVT1-201ENST00000504719 HMGN5P82970 282 aaKnown RBP28.49■■■□□ 2.15
PVT1-201ENST00000504719 TRIM29Q14134 588 aa28.49■■■□□ 2.15
PVT1-201ENST00000504719 TJAP1Q5JTD0 557 aa28.49■■■□□ 2.15
PVT1-201ENST00000504719 POTEDQ86YR6 584 aa28.49■■■□□ 2.15
PVT1-201ENST00000504719 NPAS4Q8IUM7 802 aa28.49■■■□□ 2.15
PVT1-201ENST00000504719 BANK1Q8NDB2 785 aa28.49■■■□□ 2.15
PVT1-201ENST00000504719 CEP89Q96ST8 783 aa28.49■■■□□ 2.15
PVT1-201ENST00000504719 MAP7D2Q96T17 732 aa28.49■■■□□ 2.15
PVT1-201ENST00000504719 SEPT9Q9UHD8 586 aaPredicted RBP28.49■■■□□ 2.15
PVT1-201ENST00000504719 ST3GAL5Q9UNP4 418 aa28.49■■■□□ 2.15
PVT1-201ENST00000504719 GPR182O15218 404 aa28.48■■■□□ 2.15
PVT1-201ENST00000504719 PSMC5P62195 406 aa28.48■■■□□ 2.15
PVT1-201ENST00000504719 TBC1D8BQ0IIM8 1120 aa28.48■■■□□ 2.15
PVT1-201ENST00000504719 FAM228AQ86W67 206 aa28.48■■■□□ 2.15
PVT1-201ENST00000504719 DIS3L2Q8IYB7 885 aaKnown RBP28.48■■■□□ 2.15
PVT1-201ENST00000504719 ZNF710Q8N1W2 664 aa28.48■■■□□ 2.15
PVT1-201ENST00000504719 ADAMTS10Q9H324 1103 aa28.48■■■□□ 2.15
PVT1-201ENST00000504719 SPTBN5Q9NRC6 3674 aaKnown RBP28.48■■■□□ 2.15
PVT1-201ENST00000504719 TMEM150BA6NC51 233 aa28.47■■■□□ 2.15
PVT1-201ENST00000504719 MGEA5O60502 916 aa28.47■■■□□ 2.15
PVT1-201ENST00000504719 LINC00271P0C7V0 271 aa28.47■■■□□ 2.15
PVT1-201ENST00000504719 STAG3L1P0CL83 205 aa28.47■■■□□ 2.15
PVT1-201ENST00000504719 NLRP11P59045 1033 aaKnown RBP28.47■■■□□ 2.15
PVT1-201ENST00000504719 MRPS5P82675 430 aaKnown RBP28.47■■■□□ 2.15
PVT1-201ENST00000504719 SKIV2LQ15477 1246 aaKnown RBP28.47■■■□□ 2.15
PVT1-201ENST00000504719 MTERF2Q49AM1 385 aa28.47■■■□□ 2.15
PVT1-201ENST00000504719 SYMPKQ92797 1274 aaKnown RBP28.47■■■□□ 2.15
PVT1-201ENST00000504719 H3BNC9 293 aa28.46■■■□□ 2.15
PVT1-201ENST00000504719 MARCH6O60337 910 aa28.46■■■□□ 2.15
PVT1-201ENST00000504719 SARSP49591 514 aaKnown RBP28.46■■■□□ 2.15
PVT1-201ENST00000504719 FAM184AQ8NB25 1140 aa28.46■■■□□ 2.15
PVT1-201ENST00000504719 ASB2Q96Q27 587 aa28.46■■■□□ 2.15
PVT1-201ENST00000504719 RGS18Q9NS28 235 aa28.46■■■□□ 2.15
PVT1-201ENST00000504719 IGKV6-21A0A0C4DH24 114 aa28.45■■■□□ 2.14
PVT1-201ENST00000504719 DDX11L8A8MPP1 907 aa28.45■■■□□ 2.14
PVT1-201ENST00000504719 BAG4O95429 457 aaKnown RBP28.45■■■□□ 2.14
PVT1-201ENST00000504719 QARSP47897 775 aaKnown RBP28.45■■■□□ 2.14
PVT1-201ENST00000504719 GUCY1B3Q02153 619 aa28.45■■■□□ 2.14
PVT1-201ENST00000504719 GPM6BQ13491 265 aa28.45■■■□□ 2.14
PVT1-201ENST00000504719 BTG3Q14201 252 aaPredicted RBP28.45■■■□□ 2.14
PVT1-201ENST00000504719 SLFN12Q8IYM2 578 aa28.45■■■□□ 2.14
PVT1-201ENST00000504719 CLP1Q92989 425 aaKnown RBP28.45■■■□□ 2.14
PVT1-201ENST00000504719 C8orf76Q96K31 380 aa28.45■■■□□ 2.14
PVT1-201ENST00000504719 ADAM2Q99965 735 aa28.45■■■□□ 2.14
PVT1-201ENST00000504719 SH2D3AQ9BRG2 576 aa28.45■■■□□ 2.14
PVT1-201ENST00000504719 RWDD3Q9Y3V2 267 aa28.45■■■□□ 2.14
PVT1-201ENST00000504719 KIAA1671Q9BY89 1806 aa28.45■■■□□ 2.14
PVT1-201ENST00000504719 C5orf67F2Z3F1 127 aa28.44■■■□□ 2.14
PVT1-201ENST00000504719 P4HBP07237 508 aaKnown RBP28.44■■■□□ 2.14
PVT1-201ENST00000504719 GPC3P51654 580 aa28.44■■■□□ 2.14
PVT1-201ENST00000504719 EPHA7Q15375 998 aa28.44■■■□□ 2.14
PVT1-201ENST00000504719 ANO5Q75V66 913 aa28.44■■■□□ 2.14
PVT1-201ENST00000504719 CMTR2Q8IYT2 770 aaKnown RBP28.44■■■□□ 2.14
PVT1-201ENST00000504719 C1orf112Q9NSG2 853 aa28.44■■■□□ 2.14
PVT1-201ENST00000504719 FNDC1Q4ZHG4 1894 aaPredicted RBP28.44■■■□□ 2.14
PVT1-201ENST00000504719 VCANP13611 3396 aa28.44■■■□□ 2.14
PVT1-201ENST00000504719 DENND3A2RUS2 1198 aa28.43■■■□□ 2.14
PVT1-201ENST00000504719 DKC1O60832 514 aaKnown RBP eCLIP28.43■■■□□ 2.148e-7■■■■■ 28.2
PVT1-201ENST00000504719 RB1P06400 928 aa28.43■■■□□ 2.14
PVT1-201ENST00000504719 CTNNB1P35222 781 aa28.43■■■□□ 2.14
PVT1-201ENST00000504719 BMPR1AP36894 532 aa28.43■■■□□ 2.14
PVT1-201ENST00000504719 SPIRE1Q08AE8 756 aa28.43■■■□□ 2.14
PVT1-201ENST00000504719 DRP2Q13474 957 aa28.43■■■□□ 2.14
PVT1-201ENST00000504719 MRPL38Q96DV4 380 aaKnown RBP28.43■■■□□ 2.14
PVT1-201ENST00000504719 LRFN2Q9ULH4 789 aa28.43■■■□□ 2.14
PVT1-201ENST00000504719 COG5Q9UP83 839 aa28.43■■■□□ 2.14
PVT1-201ENST00000504719 C9IYK1 514 aa28.42■■■□□ 2.14
PVT1-201ENST00000504719 EIF4BP23588 611 aaKnown RBP28.42■■■□□ 2.14
PVT1-201ENST00000504719 DSC3Q14574 896 aa28.42■■■□□ 2.14
PVT1-201ENST00000504719 PTPROQ16827 1216 aa28.42■■■□□ 2.14
PVT1-201ENST00000504719 NCAPH2Q6IBW4 605 aa28.42■■■□□ 2.14
PVT1-201ENST00000504719 SLC24A5Q71RS6 500 aa28.42■■■□□ 2.14
PVT1-201ENST00000504719 ZNF668Q96K58 619 aaPredicted RBP28.42■■■□□ 2.14
PVT1-201ENST00000504719 WRAP73Q9P2S5 460 aaPredicted RBP28.42■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms