RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 MLXIPQ9HAP2 919 aa11.53□□□□□ -0.56
TPM3-217ENST00000504663 GPRC5CQ9NQ84 441 aa11.53□□□□□ -0.56
TPM3-217ENST00000504663 CYP26B1Q9NR63 512 aa11.53□□□□□ -0.56
TPM3-217ENST00000504663 SAMSN1Q9NSI8 373 aaKnown RBP11.53□□□□□ -0.56
TPM3-217ENST00000504663 SAGE1Q9NXZ1 904 aa11.53□□□□□ -0.56
TPM3-217ENST00000504663 SLC5A4Q9NY91 659 aa11.53□□□□□ -0.56
TPM3-217ENST00000504663 TCEAL9Q9UHQ7 104 aa11.53□□□□□ -0.56
TPM3-217ENST00000504663 DACH1Q9UI36 760 aa11.53□□□□□ -0.56
TPM3-217ENST00000504663 SCN10AQ9Y5Y9 1956 aa11.52□□□□□ -0.56
TPM3-217ENST00000504663 IGKV6-21A0A0C4DH24 114 aa11.52□□□□□ -0.57
TPM3-217ENST00000504663 SFI1A8K8P3 1242 aa11.52□□□□□ -0.57
TPM3-217ENST00000504663 GPR25O00155 361 aa11.52□□□□□ -0.57
TPM3-217ENST00000504663 NKRFO15226 690 aaKnown RBP eCLIP11.52□□□□□ -0.57
TPM3-217ENST00000504663 LGALS2P05162 132 aa11.52□□□□□ -0.57
TPM3-217ENST00000504663 GAP43P17677 238 aa11.52□□□□□ -0.57
TPM3-217ENST00000504663 CCNE1P24864 410 aa11.52□□□□□ -0.57
TPM3-217ENST00000504663 STAT5BP51692 787 aa11.52□□□□□ -0.57
TPM3-217ENST00000504663 SOX10P56693 466 aa11.52□□□□□ -0.57
TPM3-217ENST00000504663 LAMC2Q13753 1193 aa11.52□□□□□ -0.57
TPM3-217ENST00000504663 XKR9Q5GH70 373 aa11.52□□□□□ -0.57
TPM3-217ENST00000504663 SPATA1Q5VX52 437 aa11.52□□□□□ -0.57
TPM3-217ENST00000504663 IQSEC1Q6DN90 963 aa11.52□□□□□ -0.57
TPM3-217ENST00000504663 CENPPQ6IPU0 288 aa11.52□□□□□ -0.57
TPM3-217ENST00000504663 KLHL10Q6JEL2 608 aa11.52□□□□□ -0.57
TPM3-217ENST00000504663 PLPPR4Q7Z2D5 763 aa11.52□□□□□ -0.57
TPM3-217ENST00000504663 LINC01465Q8N7H1 131 aa11.52□□□□□ -0.57
TPM3-217ENST00000504663 ATP8B4Q8TF62 1192 aa11.52□□□□□ -0.57
TPM3-217ENST00000504663 KCNN1Q92952 543 aa11.52□□□□□ -0.57
TPM3-217ENST00000504663 P2RX5Q93086 422 aa11.52□□□□□ -0.57
TPM3-217ENST00000504663 DHTKD1Q96HY7 919 aaPredicted RBP11.52□□□□□ -0.57
TPM3-217ENST00000504663 PPP1R9BQ96SB3 815 aa11.52□□□□□ -0.57
TPM3-217ENST00000504663 NAT10Q9H0A0 1025 aaKnown RBP11.52□□□□□ -0.57
TPM3-217ENST00000504663 IKZF4Q9H2S9 585 aa11.52□□□□□ -0.57
TPM3-217ENST00000504663 BMP2KQ9NSY1 1161 aaPredicted RBP11.52□□□□□ -0.57
TPM3-217ENST00000504663 INTS13Q9NVM9 706 aa11.52□□□□□ -0.57
TPM3-217ENST00000504663 FANCLQ9NW38 375 aa11.52□□□□□ -0.57
TPM3-217ENST00000504663 TBC1D7Q9P0N9 293 aa11.52□□□□□ -0.57
TPM3-217ENST00000504663 SEPT9Q9UHD8 586 aaPredicted RBP11.52□□□□□ -0.57
TPM3-217ENST00000504663 NRBP1Q9UHY1 535 aa11.52□□□□□ -0.57
TPM3-217ENST00000504663 NFE2L3Q9Y4A8 694 aa11.52□□□□□ -0.57
TPM3-217ENST00000504663 ADGRA3Q8IWK6 1321 aa11.52□□□□□ -0.57
TPM3-217ENST00000504663 A6NJR5 290 aa11.51□□□□□ -0.57
TPM3-217ENST00000504663 DKC1O60832 514 aaKnown RBP eCLIP11.51□□□□□ -0.57
TPM3-217ENST00000504663 NMT1P30419 496 aaKnown RBP11.51□□□□□ -0.57
TPM3-217ENST00000504663 NCKAP1LP55160 1127 aa11.51□□□□□ -0.57
TPM3-217ENST00000504663 NKX3-2P78367 333 aa11.51□□□□□ -0.57
TPM3-217ENST00000504663 TNFAIP2Q03169 654 aa11.51□□□□□ -0.57
TPM3-217ENST00000504663 KCNA1Q09470 495 aa11.51□□□□□ -0.57
TPM3-217ENST00000504663 MTERF2Q49AM1 385 aa11.51□□□□□ -0.57
TPM3-217ENST00000504663 HERC4Q5GLZ8 1057 aaPredicted RBP11.51□□□□□ -0.57
TPM3-217ENST00000504663 MAP3K21Q5TCX8 1036 aa11.51□□□□□ -0.57
TPM3-217ENST00000504663 FAM160B1Q5W0V3 765 aa11.51□□□□□ -0.57
TPM3-217ENST00000504663 LRRC55Q6ZSA7 311 aa11.51□□□□□ -0.57
TPM3-217ENST00000504663 ZNF507Q8TCN5 953 aa11.51□□□□□ -0.57
TPM3-217ENST00000504663 KAT2BQ92831 832 aa11.51□□□□□ -0.57
TPM3-217ENST00000504663 CEP170P1Q96L14 293 aa11.51□□□□□ -0.57
TPM3-217ENST00000504663 TIPINQ9BVW5 301 aa11.51□□□□□ -0.57
TPM3-217ENST00000504663 PARVGQ9HBI0 331 aa11.51□□□□□ -0.57
TPM3-217ENST00000504663 SRRDQ9UH36 339 aa11.51□□□□□ -0.57
TPM3-217ENST00000504663 MYADML2A6NDP7 307 aa11.5□□□□□ -0.57
TPM3-217ENST00000504663 TGFB1I1O43294 461 aa11.5□□□□□ -0.57
TPM3-217ENST00000504663 TBCAO75347 108 aaKnown RBP11.5□□□□□ -0.57
TPM3-217ENST00000504663 DGAT1O75907 488 aa11.5□□□□□ -0.57
TPM3-217ENST00000504663 FAM13AO94988 1023 aa11.5□□□□□ -0.57
TPM3-217ENST00000504663 KRT18P05783 430 aaKnown RBP11.5□□□□□ -0.57
TPM3-217ENST00000504663 ZNF286BP0CG31 522 aa11.5□□□□□ -0.57
TPM3-217ENST00000504663 PLS3P13797 630 aa11.5□□□□□ -0.57
TPM3-217ENST00000504663 ZNF75DP51815 510 aa11.5□□□□□ -0.57
TPM3-217ENST00000504663 DRP2Q13474 957 aa11.5□□□□□ -0.57
TPM3-217ENST00000504663 EMC2Q15006 297 aa11.5□□□□□ -0.57
TPM3-217ENST00000504663 ANKRD40Q6AI12 368 aa11.5□□□□□ -0.57
TPM3-217ENST00000504663 TAS1R3Q7RTX0 852 aa11.5□□□□□ -0.57
TPM3-217ENST00000504663 OR6J1Q8NGC5 347 aa11.5□□□□□ -0.57
TPM3-217ENST00000504663 ASAP3Q8TDY4 903 aa11.5□□□□□ -0.57
TPM3-217ENST00000504663 CCDC47Q96A33 483 aaKnown RBP11.5□□□□□ -0.57
TPM3-217ENST00000504663 GTPBP4Q9BZE4 634 aaKnown RBP11.5□□□□□ -0.57
TPM3-217ENST00000504663 UPF3AQ9H1J1 476 aaKnown RBP11.5□□□□□ -0.57
TPM3-217ENST00000504663 RNPEPQ9H4A4 650 aa11.5□□□□□ -0.57
TPM3-217ENST00000504663 ST6GALNAC4Q9H4F1 302 aa11.5□□□□□ -0.57
TPM3-217ENST00000504663 SEL1LQ9UBV2 794 aa11.5□□□□□ -0.57
TPM3-217ENST00000504663 COL4A3BPQ9Y5P4 624 aa11.5□□□□□ -0.57
TPM3-217ENST00000504663 SMTNL1A8MU46 457 aa11.49□□□□□ -0.57
TPM3-217ENST00000504663 BECN2A8MW95 431 aa11.49□□□□□ -0.57
TPM3-217ENST00000504663 NOP56O00567 594 aaKnown RBP11.49□□□□□ -0.57
TPM3-217ENST00000504663 PSMA7O14818 248 aa11.49□□□□□ -0.57
TPM3-217ENST00000504663 EIF3DO15371 548 aaKnown RBP eCLIP11.49□□□□□ -0.57
TPM3-217ENST00000504663 MAFO75444 373 aaPredicted RBP11.49□□□□□ -0.57
TPM3-217ENST00000504663 PRPF6O94906 941 aaKnown RBP11.49□□□□□ -0.57
TPM3-217ENST00000504663 ADCY5O95622 1261 aa11.49□□□□□ -0.57
TPM3-217ENST00000504663 F2P00734 622 aa11.49□□□□□ -0.57
TPM3-217ENST00000504663 MAPTP10636 758 aaKnown RBP11.49□□□□□ -0.57
TPM3-217ENST00000504663 ELNP15502 786 aa11.49□□□□□ -0.57
TPM3-217ENST00000504663 HSPA6P17066 643 aa11.49□□□□□ -0.57
TPM3-217ENST00000504663 MARK3P27448 753 aa11.49□□□□□ -0.57
TPM3-217ENST00000504663 ARL2P36404 184 aa11.49□□□□□ -0.57
TPM3-217ENST00000504663 PPP1R2P41236 205 aa11.49□□□□□ -0.57
TPM3-217ENST00000504663 SLC26A2P50443 739 aa11.49□□□□□ -0.57
TPM3-217ENST00000504663 RTP1P59025 263 aa11.49□□□□□ -0.57
TPM3-217ENST00000504663 CACNB2Q08289 660 aaPredicted RBP11.49□□□□□ -0.57
TPM3-217ENST00000504663 HIC1Q14526 733 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms