RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 XRCC6P12956 609 aaKnown RBP eCLIP14.78□□□□□ -0.04
PDLIM7-212ENST00000504380 CMA1P23946 247 aa14.78□□□□□ -0.04
PDLIM7-212ENST00000504380 NDUFA8P51970 172 aa14.78□□□□□ -0.04
PDLIM7-212ENST00000504380 TBC1D8BQ0IIM8 1120 aa14.78□□□□□ -0.04
PDLIM7-212ENST00000504380 TMEM62Q0P6H9 643 aa14.78□□□□□ -0.04
PDLIM7-212ENST00000504380 MKRN4PQ13434 485 aaPredicted RBP14.78□□□□□ -0.04
PDLIM7-212ENST00000504380 NAALADL2Q58DX5 795 aa14.78□□□□□ -0.04
PDLIM7-212ENST00000504380 PADI6Q6TGC4 694 aa14.78□□□□□ -0.04
PDLIM7-212ENST00000504380 SERINC5Q86VE9 423 aa14.78□□□□□ -0.04
PDLIM7-212ENST00000504380 RAD54LQ92698 747 aa14.78□□□□□ -0.04
PDLIM7-212ENST00000504380 TMEM143Q96AN5 459 aa14.78□□□□□ -0.04
PDLIM7-212ENST00000504380 TRIM43Q96BQ3 446 aaPredicted RBP14.78□□□□□ -0.04
PDLIM7-212ENST00000504380 ZNF668Q96K58 619 aaPredicted RBP14.78□□□□□ -0.04
PDLIM7-212ENST00000504380 HTATIP2Q9BUP3 242 aa14.78□□□□□ -0.04
PDLIM7-212ENST00000504380 RUSC1Q9BVN2 902 aa14.78□□□□□ -0.04
PDLIM7-212ENST00000504380 PPP1R12CQ9BZL4 782 aa14.78□□□□□ -0.04
PDLIM7-212ENST00000504380 NT5C3AQ9H0P0 336 aa14.78□□□□□ -0.04
PDLIM7-212ENST00000504380 PDLIM7Q9NR12 457 aa14.78□□□□□ -0.04
PDLIM7-212ENST00000504380 TMEM39AQ9NV64 488 aa14.78□□□□□ -0.04
PDLIM7-212ENST00000504380 ZMYND8Q9ULU4 1186 aaPredicted RBP14.78□□□□□ -0.04
PDLIM7-212ENST00000504380 PCDHA2Q9Y5H9 948 aa14.78□□□□□ -0.04
PDLIM7-212ENST00000504380 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.77□□□□□ -0.05
PDLIM7-212ENST00000504380 A0A1W2PQ27 194 aa14.77□□□□□ -0.05
PDLIM7-212ENST00000504380 A0A1W2PQ64 194 aa14.77□□□□□ -0.05
PDLIM7-212ENST00000504380 A0A1W2PQD8 194 aa14.77□□□□□ -0.05
PDLIM7-212ENST00000504380 GOLGA6L4A6NEF3 574 aa14.77□□□□□ -0.05
PDLIM7-212ENST00000504380 SLC26A4O43511 780 aa14.77□□□□□ -0.05
PDLIM7-212ENST00000504380 EVI5O60447 810 aa14.77□□□□□ -0.05
PDLIM7-212ENST00000504380 MAFO75444 373 aaPredicted RBP14.77□□□□□ -0.05
PDLIM7-212ENST00000504380 SYN1P17600 705 aa14.77□□□□□ -0.05
PDLIM7-212ENST00000504380 STAT6P42226 847 aa14.77□□□□□ -0.05
PDLIM7-212ENST00000504380 POLGP54098 1239 aaPredicted RBP14.77□□□□□ -0.05
PDLIM7-212ENST00000504380 RAD51AP2Q09MP3 1159 aa14.77□□□□□ -0.05
PDLIM7-212ENST00000504380 PTK7Q13308 1070 aa14.77□□□□□ -0.05
PDLIM7-212ENST00000504380 EMC2Q15006 297 aa14.77□□□□□ -0.05
PDLIM7-212ENST00000504380 TRIM71Q2Q1W2 868 aaKnown RBP14.77□□□□□ -0.05
PDLIM7-212ENST00000504380 STAMQ92783 540 aa14.77□□□□□ -0.05
PDLIM7-212ENST00000504380 TOX2Q96NM4 488 aa14.77□□□□□ -0.05
PDLIM7-212ENST00000504380 SEZ6LQ9BYH1 1024 aa14.77□□□□□ -0.05
PDLIM7-212ENST00000504380 GPRC5CQ9NQ84 441 aa14.77□□□□□ -0.05
PDLIM7-212ENST00000504380 XPNPEP1Q9NQW7 623 aa14.77□□□□□ -0.05
PDLIM7-212ENST00000504380 SERTAD1Q9UHV2 236 aa14.77□□□□□ -0.05
PDLIM7-212ENST00000504380 KCNH3Q9ULD8 1083 aa14.77□□□□□ -0.05
PDLIM7-212ENST00000504380 TRIOBPQ9H2D6 2365 aa14.76□□□□□ -0.05
PDLIM7-212ENST00000504380 MAGEB2O15479 319 aa14.76□□□□□ -0.05
PDLIM7-212ENST00000504380 VTNP04004 478 aa14.76□□□□□ -0.05
PDLIM7-212ENST00000504380 CTSHP09668 335 aa14.76□□□□□ -0.05
PDLIM7-212ENST00000504380 ITGB8P26012 769 aa14.76□□□□□ -0.05
PDLIM7-212ENST00000504380 CYP2C18P33260 490 aa14.76□□□□□ -0.05
PDLIM7-212ENST00000504380 THPOP40225 353 aa14.76□□□□□ -0.05
PDLIM7-212ENST00000504380 RFC5P40937 340 aa14.76□□□□□ -0.05
PDLIM7-212ENST00000504380 SLC12A3P55017 1021 aa14.76□□□□□ -0.05
PDLIM7-212ENST00000504380 CACNB1Q02641 598 aaPredicted RBP14.76□□□□□ -0.05
PDLIM7-212ENST00000504380 E2F4Q16254 413 aa14.76□□□□□ -0.05
PDLIM7-212ENST00000504380 RINT1Q6NUQ1 792 aa14.76□□□□□ -0.05
PDLIM7-212ENST00000504380 CCDC73Q6ZRK6 1079 aa14.76□□□□□ -0.05
PDLIM7-212ENST00000504380 CLEC17AQ6ZS10 378 aa14.76□□□□□ -0.05
PDLIM7-212ENST00000504380 KIAA0319LQ8IZA0 1049 aa14.76□□□□□ -0.05
PDLIM7-212ENST00000504380 LINC01465Q8N7H1 131 aa14.76□□□□□ -0.05
PDLIM7-212ENST00000504380 SYT2Q8N9I0 419 aaPredicted RBP14.76□□□□□ -0.05
PDLIM7-212ENST00000504380 TMEM87AQ8NBN3 555 aa14.76□□□□□ -0.05
PDLIM7-212ENST00000504380 MRPS27Q92552 414 aaKnown RBP14.76□□□□□ -0.05
PDLIM7-212ENST00000504380 OSBPL7Q9BZF2 842 aa14.76□□□□□ -0.05
PDLIM7-212ENST00000504380 DHX33Q9H6R0 707 aaKnown RBP14.76□□□□□ -0.05
PDLIM7-212ENST00000504380 HPSEQ9Y251 543 aa14.76□□□□□ -0.05
PDLIM7-212ENST00000504380 A0A0C4DFX4 3053 aa14.75□□□□□ -0.05
PDLIM7-212ENST00000504380 IGKV6-21A0A0C4DH24 114 aa14.75□□□□□ -0.05
PDLIM7-212ENST00000504380 SMIM35A0A1B0GVV1 85 aa14.75□□□□□ -0.05
PDLIM7-212ENST00000504380 LIG1P18858 919 aa14.75□□□□□ -0.05
PDLIM7-212ENST00000504380 CYP11B2P19099 503 aa14.75□□□□□ -0.05
PDLIM7-212ENST00000504380 CCL23P55773 120 aa14.75□□□□□ -0.05
PDLIM7-212ENST00000504380 CSPP1Q1MSJ5 1256 aa14.75□□□□□ -0.05
PDLIM7-212ENST00000504380 LONRF3Q496Y0 759 aa14.75□□□□□ -0.05
PDLIM7-212ENST00000504380 ARSHQ5FYA8 562 aa14.75□□□□□ -0.05
PDLIM7-212ENST00000504380 ZNF618Q5T7W0 954 aa14.75□□□□□ -0.05
PDLIM7-212ENST00000504380 C1orf186Q6ZWK4 172 aa14.75□□□□□ -0.05
PDLIM7-212ENST00000504380 GPBP1Q86WP2 473 aa14.75□□□□□ -0.05
PDLIM7-212ENST00000504380 KSR1Q8IVT5 923 aa14.75□□□□□ -0.05
PDLIM7-212ENST00000504380 GRAMD1CQ8IYS0 662 aa14.75□□□□□ -0.05
PDLIM7-212ENST00000504380 RETREG2Q8NC44 543 aa14.75□□□□□ -0.05
PDLIM7-212ENST00000504380 SLC7A3Q8WY07 619 aa14.75□□□□□ -0.05
PDLIM7-212ENST00000504380 LARP4BQ92615 738 aaKnown RBP14.75□□□□□ -0.05
PDLIM7-212ENST00000504380 GBP4Q96PP9 640 aa14.75□□□□□ -0.05
PDLIM7-212ENST00000504380 MTRQ99707 1265 aa14.75□□□□□ -0.05
PDLIM7-212ENST00000504380 NOC4LQ9BVI4 516 aaKnown RBP14.75□□□□□ -0.05
PDLIM7-212ENST00000504380 PRO3102Q9H379 93 aa14.75□□□□□ -0.05
PDLIM7-212ENST00000504380 HIPK3Q9H422 1215 aa14.75□□□□□ -0.05
PDLIM7-212ENST00000504380 CDHR5Q9HBB8 845 aa14.75□□□□□ -0.05
PDLIM7-212ENST00000504380 ATP6V0A4Q9HBG4 840 aa14.75□□□□□ -0.05
PDLIM7-212ENST00000504380 SUCLA2Q9P2R7 463 aaPredicted RBP14.75□□□□□ -0.05
PDLIM7-212ENST00000504380 STK17AQ9UEE5 414 aa14.75□□□□□ -0.05
PDLIM7-212ENST00000504380 TBX21Q9UL17 535 aa14.75□□□□□ -0.05
PDLIM7-212ENST00000504380 AKT3Q9Y243 479 aa14.75□□□□□ -0.05
PDLIM7-212ENST00000504380 FAM237AA0A1B0GTK4 181 aa14.74□□□□□ -0.05
PDLIM7-212ENST00000504380 SFI1A8K8P3 1242 aa14.74□□□□□ -0.05
PDLIM7-212ENST00000504380 DGAT1O75907 488 aa14.74□□□□□ -0.05
PDLIM7-212ENST00000504380 CKBP12277 381 aa14.74□□□□□ -0.05
PDLIM7-212ENST00000504380 CASP1P29466 404 aa14.74□□□□□ -0.05
PDLIM7-212ENST00000504380 SYKP43405 635 aa14.74□□□□□ -0.05
PDLIM7-212ENST00000504380 FAM102BQ5T8I3 360 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms