RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 ARID2Q68CP9 1835 aa15.79■□□□□ 0.12
PDLIM7-211ENST00000504318 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.78■□□□□ 0.12
PDLIM7-211ENST00000504318 C9IYK1 514 aa15.78■□□□□ 0.12
PDLIM7-211ENST00000504318 M0QZ92 97 aa15.78■□□□□ 0.12
PDLIM7-211ENST00000504318 JAK2O60674 1132 aa15.78■□□□□ 0.12
PDLIM7-211ENST00000504318 KCNQ1P51787 676 aa15.78■□□□□ 0.12
PDLIM7-211ENST00000504318 CRYBB1P53674 252 aaPredicted RBP15.78■□□□□ 0.12
PDLIM7-211ENST00000504318 PAK2Q13177 524 aa15.78■□□□□ 0.12
PDLIM7-211ENST00000504318 DRP2Q13474 957 aa15.78■□□□□ 0.12
PDLIM7-211ENST00000504318 CAMK1Q14012 370 aa15.78■□□□□ 0.12
PDLIM7-211ENST00000504318 NEK8Q86SG6 692 aa15.78■□□□□ 0.12
PDLIM7-211ENST00000504318 NPAS4Q8IUM7 802 aa15.78■□□□□ 0.12
PDLIM7-211ENST00000504318 MRPL38Q96DV4 380 aaKnown RBP15.78■□□□□ 0.12
PDLIM7-211ENST00000504318 OSMRQ99650 979 aa15.78■□□□□ 0.12
PDLIM7-211ENST00000504318 ST3GAL5Q9UNP4 418 aa15.78■□□□□ 0.12
PDLIM7-211ENST00000504318 CEP131Q9UPN4 1083 aa15.78■□□□□ 0.12
PDLIM7-211ENST00000504318 SAMM50Q9Y512 469 aa15.78■□□□□ 0.12
PDLIM7-211ENST00000504318 PLXNA4Q9HCM2 1894 aa15.78■□□□□ 0.12
PDLIM7-211ENST00000504318 MAGEB2O15479 319 aa15.77■□□□□ 0.12
PDLIM7-211ENST00000504318 BMPR1AP36894 532 aa15.77■□□□□ 0.12
PDLIM7-211ENST00000504318 GATMP50440 423 aa15.77■□□□□ 0.12
PDLIM7-211ENST00000504318 GPC3P51654 580 aa15.77■□□□□ 0.12
PDLIM7-211ENST00000504318 NEK4P51957 841 aa15.77■□□□□ 0.12
PDLIM7-211ENST00000504318 FAM189BP81408 668 aa15.77■□□□□ 0.12
PDLIM7-211ENST00000504318 LETM2Q2VYF4 491 aa15.77■□□□□ 0.12
PDLIM7-211ENST00000504318 EFCAB12Q6NXP0 572 aa15.77■□□□□ 0.12
PDLIM7-211ENST00000504318 FAM43BQ6ZT52 329 aaPredicted RBP15.77■□□□□ 0.12
PDLIM7-211ENST00000504318 PIK3AP1Q6ZUJ8 805 aa15.77■□□□□ 0.12
PDLIM7-211ENST00000504318 ANO5Q75V66 913 aa15.77■□□□□ 0.12
PDLIM7-211ENST00000504318 TRMT1LQ7Z2T5 733 aaKnown RBP15.77■□□□□ 0.12
PDLIM7-211ENST00000504318 MIER3Q7Z3K6 550 aa15.77■□□□□ 0.12
PDLIM7-211ENST00000504318 CKAP2LQ8IYA6 745 aa15.77■□□□□ 0.12
PDLIM7-211ENST00000504318 CMTR2Q8IYT2 770 aaKnown RBP15.77■□□□□ 0.12
PDLIM7-211ENST00000504318 LRRC71Q8N4P6 559 aa15.77■□□□□ 0.12
PDLIM7-211ENST00000504318 FIBCD1Q8N539 461 aa15.77■□□□□ 0.12
PDLIM7-211ENST00000504318 SYMPKQ92797 1274 aaKnown RBP15.77■□□□□ 0.12
PDLIM7-211ENST00000504318 PPP1R16BQ96T49 567 aa15.77■□□□□ 0.12
PDLIM7-211ENST00000504318 RGS18Q9NS28 235 aa15.77■□□□□ 0.12
PDLIM7-211ENST00000504318 MRPL42Q9Y6G3 142 aaKnown RBP15.77■□□□□ 0.12
PDLIM7-211ENST00000504318 BDP1A6H8Y1 2624 aa15.76■□□□□ 0.11
PDLIM7-211ENST00000504318 TBX3O15119 743 aa15.76■□□□□ 0.11
PDLIM7-211ENST00000504318 RPS6KA5O75582 802 aa15.76■□□□□ 0.11
PDLIM7-211ENST00000504318 GCFC2P16383 781 aaKnown RBP15.76■□□□□ 0.11
PDLIM7-211ENST00000504318 SARSP49591 514 aaKnown RBP15.76■□□□□ 0.11
PDLIM7-211ENST00000504318 POTEDQ86YR6 584 aa15.76■□□□□ 0.11
PDLIM7-211ENST00000504318 ADAMTS19Q8TE59 1207 aa15.76■□□□□ 0.11
PDLIM7-211ENST00000504318 FAM20AQ96MK3 541 aa15.76■□□□□ 0.11
PDLIM7-211ENST00000504318 RNF19AQ9NV58 838 aa15.76■□□□□ 0.11
PDLIM7-211ENST00000504318 COG5Q9UP83 839 aa15.76■□□□□ 0.11
PDLIM7-211ENST00000504318 CCDC194A0A1B0GVG4 234 aa15.75■□□□□ 0.11
PDLIM7-211ENST00000504318 GRM6O15303 877 aa15.75■□□□□ 0.11
PDLIM7-211ENST00000504318 MMP1P03956 469 aa15.75■□□□□ 0.11
PDLIM7-211ENST00000504318 RB1P06400 928 aa15.75■□□□□ 0.11
PDLIM7-211ENST00000504318 NLRP11P59045 1033 aaKnown RBP15.75■□□□□ 0.11
PDLIM7-211ENST00000504318 GPM6BQ13491 265 aa15.75■□□□□ 0.11
PDLIM7-211ENST00000504318 XKR3Q5GH77 459 aa15.75■□□□□ 0.11
PDLIM7-211ENST00000504318 METTL13Q8N6R0 699 aa15.75■□□□□ 0.11
PDLIM7-211ENST00000504318 ZNF579Q8NAF0 562 aaKnown RBP15.75■□□□□ 0.11
PDLIM7-211ENST00000504318 BANK1Q8NDB2 785 aa15.75■□□□□ 0.11
PDLIM7-211ENST00000504318 ADAM2Q99965 735 aa15.75■□□□□ 0.11
PDLIM7-211ENST00000504318 SH2D3AQ9BRG2 576 aa15.75■□□□□ 0.11
PDLIM7-211ENST00000504318 NRBP2Q9NSY0 501 aa15.75■□□□□ 0.11
PDLIM7-211ENST00000504318 TCEAL9Q9UHQ7 104 aa15.75■□□□□ 0.11
PDLIM7-211ENST00000504318 GINS2Q9Y248 185 aa15.75■□□□□ 0.11
PDLIM7-211ENST00000504318 BTBD18B2RXH4 712 aa15.74■□□□□ 0.11
PDLIM7-211ENST00000504318 XBP1P17861 261 aa15.74■□□□□ 0.11
PDLIM7-211ENST00000504318 DNAJB1P25685 340 aa15.74■□□□□ 0.11
PDLIM7-211ENST00000504318 KRT2P35908 639 aa15.74■□□□□ 0.11
PDLIM7-211ENST00000504318 NFX1Q12986 1120 aaKnown RBP15.74■□□□□ 0.11
PDLIM7-211ENST00000504318 WASF1Q92558 559 aa15.74■□□□□ 0.11
PDLIM7-211ENST00000504318 HLA-CQ95604 372 aa15.74■□□□□ 0.11
PDLIM7-211ENST00000504318 NECAB3Q96P71 396 aaPredicted RBP15.74■□□□□ 0.11
PDLIM7-211ENST00000504318 GPR182O15218 404 aa15.73■□□□□ 0.11
PDLIM7-211ENST00000504318 CCNT1O60563 726 aaKnown RBP15.73■□□□□ 0.11
PDLIM7-211ENST00000504318 MAFO75444 373 aaPredicted RBP15.73■□□□□ 0.11
PDLIM7-211ENST00000504318 DARSP14868 501 aaKnown RBP15.73■□□□□ 0.11
PDLIM7-211ENST00000504318 EIF4BP23588 611 aaKnown RBP15.73■□□□□ 0.11
PDLIM7-211ENST00000504318 CTNNB1P35222 781 aa15.73■□□□□ 0.11
PDLIM7-211ENST00000504318 PSMC5P62195 406 aa15.73■□□□□ 0.11
PDLIM7-211ENST00000504318 BTG3Q14201 252 aaPredicted RBP15.73■□□□□ 0.11
PDLIM7-211ENST00000504318 SKIV2LQ15477 1246 aaKnown RBP15.73■□□□□ 0.11
PDLIM7-211ENST00000504318 MTERF2Q49AM1 385 aa15.73■□□□□ 0.11
PDLIM7-211ENST00000504318 FAM102BQ5T8I3 360 aa15.73■□□□□ 0.11
PDLIM7-211ENST00000504318 SLC24A5Q71RS6 500 aa15.73■□□□□ 0.11
PDLIM7-211ENST00000504318 P2RX5Q93086 422 aa15.73■□□□□ 0.11
PDLIM7-211ENST00000504318 ZNF668Q96K58 619 aaPredicted RBP15.73■□□□□ 0.11
PDLIM7-211ENST00000504318 PLVAPQ9BX97 442 aa15.73■□□□□ 0.11
PDLIM7-211ENST00000504318 ELAC1Q9H777 363 aaKnown RBP15.73■□□□□ 0.11
PDLIM7-211ENST00000504318 UBE2ZQ9H832 354 aaPredicted RBP15.73■□□□□ 0.11
PDLIM7-211ENST00000504318 C1orf112Q9NSG2 853 aa15.73■□□□□ 0.11
PDLIM7-211ENST00000504318 HCSTQ9UBK5 93 aa15.73■□□□□ 0.11
PDLIM7-211ENST00000504318 RWDD3Q9Y3V2 267 aa15.73■□□□□ 0.11
PDLIM7-211ENST00000504318 ITGB1P05556 798 aa15.72■□□□□ 0.11
PDLIM7-211ENST00000504318 STAG3L1P0CL83 205 aa15.72■□□□□ 0.11
PDLIM7-211ENST00000504318 ATF7P17544 494 aaPredicted RBP15.72■□□□□ 0.11
PDLIM7-211ENST00000504318 TBC1D8BQ0IIM8 1120 aa15.72■□□□□ 0.11
PDLIM7-211ENST00000504318 TCEAL5Q5H9L2 206 aa15.72■□□□□ 0.11
PDLIM7-211ENST00000504318 PLA2G4FQ68DD2 849 aa15.72■□□□□ 0.11
PDLIM7-211ENST00000504318 ZNF598Q86UK7 904 aaKnown RBP15.72■□□□□ 0.11
PDLIM7-211ENST00000504318 DIS3L2Q8IYB7 885 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms