RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 PROCA1Q8NCQ7 364 aaPredicted RBP10.75□□□□□ -0.69
COL1A1-210ENST00000504289 NLGN2Q8NFZ4 835 aa10.75□□□□□ -0.69
COL1A1-210ENST00000504289 GOLGA1Q92805 767 aa10.75□□□□□ -0.69
COL1A1-210ENST00000504289 DCPSQ96C86 337 aaKnown RBP10.75□□□□□ -0.69
COL1A1-210ENST00000504289 CCDC43Q96MW1 224 aaKnown RBP10.75□□□□□ -0.69
COL1A1-210ENST00000504289 ACCSQ96QU6 501 aa10.75□□□□□ -0.69
COL1A1-210ENST00000504289 MOV10L1Q9BXT6 1211 aaKnown RBP10.75□□□□□ -0.69
COL1A1-210ENST00000504289 GANQ9H2C0 597 aa10.75□□□□□ -0.69
COL1A1-210ENST00000504289 DEF6Q9H4E7 631 aa10.75□□□□□ -0.69
COL1A1-210ENST00000504289 CYP39A1Q9NYL5 469 aa10.75□□□□□ -0.69
COL1A1-210ENST00000504289 ARHGAP20Q9P2F6 1191 aa10.75□□□□□ -0.69
COL1A1-210ENST00000504289 EXOC7Q9UPT5 735 aa10.75□□□□□ -0.69
COL1A1-210ENST00000504289 SSC5DA1L4H1 1573 aa10.74□□□□□ -0.69
COL1A1-210ENST00000504289 LOC102724159A0A0B4J2E5 919 aa10.74□□□□□ -0.69
COL1A1-210ENST00000504289 LRRC53A6NM62 1247 aa10.74□□□□□ -0.69
COL1A1-210ENST00000504289 SPDYE16A6NNV3 312 aaPredicted RBP10.74□□□□□ -0.69
COL1A1-210ENST00000504289 BTNL10A8MVZ5 291 aa10.74□□□□□ -0.69
COL1A1-210ENST00000504289 CXCL11O14625 94 aa10.74□□□□□ -0.69
COL1A1-210ENST00000504289 N4BP1O75113 896 aaKnown RBP10.74□□□□□ -0.69
COL1A1-210ENST00000504289 HIP1RO75146 1068 aa10.74□□□□□ -0.69
COL1A1-210ENST00000504289 TACC1O75410 805 aa10.74□□□□□ -0.69
COL1A1-210ENST00000504289 AKAP3O75969 853 aa10.74□□□□□ -0.69
COL1A1-210ENST00000504289 PSAPP07602 524 aa10.74□□□□□ -0.69
COL1A1-210ENST00000504289 CCDC172P0C7W6 258 aa10.74□□□□□ -0.69
COL1A1-210ENST00000504289 H2AFXP16104 143 aaPredicted RBP10.74□□□□□ -0.69
COL1A1-210ENST00000504289 YWHABP31946 246 aaKnown RBP10.74□□□□□ -0.69
COL1A1-210ENST00000504289 EIF4A3P38919 411 aaKnown RBP10.74□□□□□ -0.69
COL1A1-210ENST00000504289 PRKCIP41743 596 aa10.74□□□□□ -0.69
COL1A1-210ENST00000504289 IREB2P48200 963 aaKnown RBP10.74□□□□□ -0.69
COL1A1-210ENST00000504289 SMTNP53814 917 aa10.74□□□□□ -0.69
COL1A1-210ENST00000504289 GTF2BQ00403 316 aa10.74□□□□□ -0.69
COL1A1-210ENST00000504289 PPATQ06203 517 aa10.74□□□□□ -0.69
COL1A1-210ENST00000504289 TMEM132BQ14DG7 1078 aa10.74□□□□□ -0.69
COL1A1-210ENST00000504289 PWP2Q15269 919 aaKnown RBP10.74□□□□□ -0.69
COL1A1-210ENST00000504289 KLHDC7AQ5VTJ3 777 aa10.74□□□□□ -0.69
COL1A1-210ENST00000504289 HGSNATQ68CP4 663 aa10.74□□□□□ -0.69
COL1A1-210ENST00000504289 SMYD5Q6GMV2 418 aa10.74□□□□□ -0.69
COL1A1-210ENST00000504289 SULF1Q8IWU6 871 aa10.74□□□□□ -0.69
COL1A1-210ENST00000504289 FAM186BQ8IYM0 893 aa10.74□□□□□ -0.69
COL1A1-210ENST00000504289 SPIRE2Q8WWL2 714 aa10.74□□□□□ -0.69
COL1A1-210ENST00000504289 KIFAP3Q92845 792 aa10.74□□□□□ -0.69
COL1A1-210ENST00000504289 SLC35C1Q96A29 364 aa10.74□□□□□ -0.69
COL1A1-210ENST00000504289 UIMC1Q96RL1 719 aa10.74□□□□□ -0.69
COL1A1-210ENST00000504289 NTPCRQ9BSD7 190 aaKnown RBP10.74□□□□□ -0.69
COL1A1-210ENST00000504289 CCDC94Q9BW85 323 aaPredicted RBP10.74□□□□□ -0.69
COL1A1-210ENST00000504289 LSM14BQ9BX40 385 aaKnown RBP10.74□□□□□ -0.69
COL1A1-210ENST00000504289 CARD6Q9BX69 1037 aa10.74□□□□□ -0.69
COL1A1-210ENST00000504289 IFIH1Q9BYX4 1025 aaKnown RBP10.74□□□□□ -0.69
COL1A1-210ENST00000504289 AGPAT3Q9NRZ7 376 aa10.74□□□□□ -0.69
COL1A1-210ENST00000504289 HOMER2Q9NSB8 354 aa10.74□□□□□ -0.69
COL1A1-210ENST00000504289 WRAP73Q9P2S5 460 aaPredicted RBP10.74□□□□□ -0.69
COL1A1-210ENST00000504289 TSKSQ9UJT2 592 aa10.74□□□□□ -0.69
COL1A1-210ENST00000504289 USP20Q9Y2K6 914 aa10.74□□□□□ -0.69
COL1A1-210ENST00000504289 JRKLQ9Y4A0 524 aa10.74□□□□□ -0.69
COL1A1-210ENST00000504289 SAMM50Q9Y512 469 aa10.74□□□□□ -0.69
COL1A1-210ENST00000504289 PPME1Q9Y570 386 aa10.74□□□□□ -0.69
COL1A1-210ENST00000504289 PCDHA13Q9Y5I0 950 aa10.74□□□□□ -0.69
COL1A1-210ENST00000504289 CSADQ9Y600 493 aa10.74□□□□□ -0.69
COL1A1-210ENST00000504289 ZC3H4Q9UPT8 1303 aaKnown RBP10.74□□□□□ -0.69
COL1A1-210ENST00000504289 ZMYM2Q9UBW7 1377 aa10.74□□□□□ -0.69
COL1A1-210ENST00000504289 SBF1O95248 1867 aa10.74□□□□□ -0.69
COL1A1-210ENST00000504289 SPATA31C2B4DYI2 1134 aa10.73□□□□□ -0.69
COL1A1-210ENST00000504289 EPHB6O15197 1021 aa10.73□□□□□ -0.69
COL1A1-210ENST00000504289 EIF3JO75822 258 aaKnown RBP10.73□□□□□ -0.69
COL1A1-210ENST00000504289 MYCLP12524 364 aaPredicted RBP10.73□□□□□ -0.69
COL1A1-210ENST00000504289 NMT1P30419 496 aaKnown RBP10.73□□□□□ -0.69
COL1A1-210ENST00000504289 NF2P35240 595 aa10.73□□□□□ -0.69
COL1A1-210ENST00000504289 NCKAP1LP55160 1127 aa10.73□□□□□ -0.69
COL1A1-210ENST00000504289 POLR2FP61218 127 aaKnown RBP10.73□□□□□ -0.69
COL1A1-210ENST00000504289 AMPD2Q01433 879 aa10.73□□□□□ -0.69
COL1A1-210ENST00000504289 ITIH3Q06033 890 aa10.73□□□□□ -0.69
COL1A1-210ENST00000504289 CKAP4Q07065 602 aaKnown RBP10.73□□□□□ -0.69
COL1A1-210ENST00000504289 CETN1Q12798 172 aa10.73□□□□□ -0.69
COL1A1-210ENST00000504289 GLIPR1L2Q4G1C9 344 aa10.73□□□□□ -0.69
COL1A1-210ENST00000504289 DPY19L2P1Q6NXN4 242 aa10.73□□□□□ -0.69
COL1A1-210ENST00000504289 USP50Q70EL3 339 aaPredicted RBP10.73□□□□□ -0.69
COL1A1-210ENST00000504289 INTS8Q75QN2 995 aaKnown RBP10.73□□□□□ -0.69
COL1A1-210ENST00000504289 TRAPPC11Q7Z392 1133 aa10.73□□□□□ -0.69
COL1A1-210ENST00000504289 VPS36Q86VN1 386 aa10.73□□□□□ -0.69
COL1A1-210ENST00000504289 RIOX2Q8IUF8 465 aa10.73□□□□□ -0.69
COL1A1-210ENST00000504289 DAW1Q8N136 415 aa10.73□□□□□ -0.69
COL1A1-210ENST00000504289 ZNF784Q8NCA9 323 aaPredicted RBP10.73□□□□□ -0.69
COL1A1-210ENST00000504289 BANK1Q8NDB2 785 aa10.73□□□□□ -0.69
COL1A1-210ENST00000504289 MCPH1Q8NEM0 835 aa10.73□□□□□ -0.69
COL1A1-210ENST00000504289 SMCR8Q8TEV9 937 aaPredicted RBP10.73□□□□□ -0.69
COL1A1-210ENST00000504289 TSC1Q92574 1164 aa10.73□□□□□ -0.69
COL1A1-210ENST00000504289 SECISBP2LQ93073 1101 aaKnown RBP10.73□□□□□ -0.69
COL1A1-210ENST00000504289 L3MBTL3Q96JM7 780 aaPredicted RBP10.73□□□□□ -0.69
COL1A1-210ENST00000504289 ALS2CR12Q96Q35 445 aa10.73□□□□□ -0.69
COL1A1-210ENST00000504289 MPHOSPH6Q99547 160 aaKnown RBP10.73□□□□□ -0.69
COL1A1-210ENST00000504289 GUCA1BQ9UMX6 200 aa10.73□□□□□ -0.69
COL1A1-210ENST00000504289 RIPK3Q9Y572 518 aa10.73□□□□□ -0.69
COL1A1-210ENST00000504289 SNCAIPQ9Y6H5 919 aa10.73□□□□□ -0.69
COL1A1-210ENST00000504289 LOC285556D6RIA3 1793 aa10.72□□□□□ -0.69
COL1A1-210ENST00000504289 MYH11P35749 1972 aa10.72□□□□□ -0.69
COL1A1-210ENST00000504289 TESPA1A2RU30 521 aaPredicted RBP10.72□□□□□ -0.69
COL1A1-210ENST00000504289 CTAGE15A4D2H0 777 aa10.72□□□□□ -0.69
COL1A1-210ENST00000504289 IRF6O14896 467 aa10.72□□□□□ -0.69
COL1A1-210ENST00000504289 NKRFO15226 690 aaKnown RBP eCLIP10.72□□□□□ -0.69
COL1A1-210ENST00000504289 CTAGE8P0CG41 777 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms