RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 USP36Q9P275 1121 aaKnown RBP6.56□□□□□ -1.36
TRAPPC13-205ENST00000504243 K7ESF4 209 aa6.55□□□□□ -1.36
TRAPPC13-205ENST00000504243 H2AFYO75367 372 aaKnown RBP6.55□□□□□ -1.36
TRAPPC13-205ENST00000504243 PRPF6O94906 941 aaKnown RBP6.55□□□□□ -1.36
TRAPPC13-205ENST00000504243 C8BP07358 591 aa6.55□□□□□ -1.36
TRAPPC13-205ENST00000504243 PCBP2Q15366 365 aaKnown RBP eCLIP6.55□□□□□ -1.36
TRAPPC13-205ENST00000504243 CT83Q5H943 113 aa6.55□□□□□ -1.36
TRAPPC13-205ENST00000504243 SLFN12LQ6IEE8 588 aa6.55□□□□□ -1.36
TRAPPC13-205ENST00000504243 CCDC62Q6P9F0 684 aa6.55□□□□□ -1.36
TRAPPC13-205ENST00000504243 STK32CQ86UX6 486 aa6.55□□□□□ -1.36
TRAPPC13-205ENST00000504243 CXorf67Q86X51 503 aaPredicted RBP6.55□□□□□ -1.36
TRAPPC13-205ENST00000504243 C1orf162Q8NEQ5 155 aaPredicted RBP6.55□□□□□ -1.36
TRAPPC13-205ENST00000504243 FNIP1Q8TF40 1166 aa6.55□□□□□ -1.36
TRAPPC13-205ENST00000504243 ACAP3Q96P50 834 aa6.55□□□□□ -1.36
TRAPPC13-205ENST00000504243 PDGFDQ9GZP0 370 aaPredicted RBP6.55□□□□□ -1.36
TRAPPC13-205ENST00000504243 QRSL1Q9H0R6 528 aaKnown RBP6.55□□□□□ -1.36
TRAPPC13-205ENST00000504243 SEMA4AQ9H3S1 761 aa6.55□□□□□ -1.36
TRAPPC13-205ENST00000504243 INCENPQ9NQS7 918 aa6.55□□□□□ -1.36
TRAPPC13-205ENST00000504243 DNAJC28Q9NX36 388 aa6.55□□□□□ -1.36
TRAPPC13-205ENST00000504243 IP6K2Q9UHH9 426 aa6.55□□□□□ -1.36
TRAPPC13-205ENST00000504243 EDARQ9UNE0 448 aa6.55□□□□□ -1.36
TRAPPC13-205ENST00000504243 LUC7L2Q9Y383 392 aaKnown RBP6.55□□□□□ -1.36
TRAPPC13-205ENST00000504243 AKAP10O43572 662 aa6.54□□□□□ -1.36
TRAPPC13-205ENST00000504243 HTRA3P83110 453 aa6.54□□□□□ -1.36
TRAPPC13-205ENST00000504243 ADCY2Q08462 1091 aa6.54□□□□□ -1.36
TRAPPC13-205ENST00000504243 PIN1Q13526 163 aaPredicted RBP6.54□□□□□ -1.36
TRAPPC13-205ENST00000504243 UGT8Q16880 541 aa6.54□□□□□ -1.36
TRAPPC13-205ENST00000504243 PHF19Q5T6S3 580 aa6.54□□□□□ -1.36
TRAPPC13-205ENST00000504243 LIPIQ6XZB0 460 aa6.54□□□□□ -1.36
TRAPPC13-205ENST00000504243 RTN4RL1Q86UN2 441 aaPredicted RBP6.54□□□□□ -1.36
TRAPPC13-205ENST00000504243 CHPFQ8IZ52 775 aa6.54□□□□□ -1.36
TRAPPC13-205ENST00000504243 CBARPQ8N350 705 aaPredicted RBP6.54□□□□□ -1.36
TRAPPC13-205ENST00000504243 IGDCC4Q8TDY8 1250 aa6.54□□□□□ -1.36
TRAPPC13-205ENST00000504243 LMBR1Q8WVP7 490 aa6.54□□□□□ -1.36
TRAPPC13-205ENST00000504243 TSR2Q969E8 191 aaKnown RBP6.54□□□□□ -1.36
TRAPPC13-205ENST00000504243 EAF2Q96CJ1 260 aaPredicted RBP6.54□□□□□ -1.36
TRAPPC13-205ENST00000504243 MAML3Q96JK9 1138 aa6.54□□□□□ -1.36
TRAPPC13-205ENST00000504243 LUC7LQ9NQ29 371 aaKnown RBP6.54□□□□□ -1.36
TRAPPC13-205ENST00000504243 HSPBP1Q9NZL4 362 aa6.54□□□□□ -1.36
TRAPPC13-205ENST00000504243 BTBD7Q9P203 1132 aa6.54□□□□□ -1.36
TRAPPC13-205ENST00000504243 ARHGAP20Q9P2F6 1191 aa6.54□□□□□ -1.36
TRAPPC13-205ENST00000504243 ZNF180Q9UJW8 692 aa6.54□□□□□ -1.36
TRAPPC13-205ENST00000504243 NOB1Q9ULX3 412 aaKnown RBP6.54□□□□□ -1.36
TRAPPC13-205ENST00000504243 E2F8A0AVK6 867 aa6.53□□□□□ -1.36
TRAPPC13-205ENST00000504243 KLHL33A6NCF5 533 aa6.53□□□□□ -1.36
TRAPPC13-205ENST00000504243 ZNF839A8K0R7 811 aa6.53□□□□□ -1.36
TRAPPC13-205ENST00000504243 PLA2G1BP04054 148 aaKnown RBP6.53□□□□□ -1.36
TRAPPC13-205ENST00000504243 GPR3P46089 330 aa6.53□□□□□ -1.36
TRAPPC13-205ENST00000504243 RGS3P49796 1198 aa6.53□□□□□ -1.36
TRAPPC13-205ENST00000504243 ALDH6A1Q02252 535 aaKnown RBP6.53□□□□□ -1.36
TRAPPC13-205ENST00000504243 LRRC41Q15345 812 aa6.53□□□□□ -1.36
TRAPPC13-205ENST00000504243 SKIDA1Q1XH10 827 aa6.53□□□□□ -1.36
TRAPPC13-205ENST00000504243 TOR2AQ5JU69 321 aa6.53□□□□□ -1.36
TRAPPC13-205ENST00000504243 LRSAM1Q6UWE0 723 aa6.53□□□□□ -1.36
TRAPPC13-205ENST00000504243 SAPCD2Q86UD0 394 aa6.53□□□□□ -1.36
TRAPPC13-205ENST00000504243 TTLL6Q8N841 843 aa6.53□□□□□ -1.36
TRAPPC13-205ENST00000504243 LINC00482Q8N8I6 264 aa6.53□□□□□ -1.36
TRAPPC13-205ENST00000504243 LINC01356Q8N9X3 169 aa6.53□□□□□ -1.36
TRAPPC13-205ENST00000504243 RPGRQ92834 1020 aaKnown RBP6.53□□□□□ -1.36
TRAPPC13-205ENST00000504243 FOXRED1Q96CU9 486 aaPredicted RBP6.53□□□□□ -1.36
TRAPPC13-205ENST00000504243 ZSWIM3Q96MP5 696 aa6.53□□□□□ -1.36
TRAPPC13-205ENST00000504243 SYT3Q9BQG1 590 aa6.53□□□□□ -1.36
TRAPPC13-205ENST00000504243 GALNT8Q9NY28 637 aa6.53□□□□□ -1.36
TRAPPC13-205ENST00000504243 INVSQ9Y283 1065 aa6.53□□□□□ -1.36
TRAPPC13-205ENST00000504243 PRSS38A1L453 326 aa6.52□□□□□ -1.37
TRAPPC13-205ENST00000504243 PCDH8O95206 1070 aa6.52□□□□□ -1.37
TRAPPC13-205ENST00000504243 SCGB1D2O95969 90 aa6.52□□□□□ -1.37
TRAPPC13-205ENST00000504243 PRLP01236 227 aa6.52□□□□□ -1.37
TRAPPC13-205ENST00000504243 LPLP06858 475 aa6.52□□□□□ -1.37
TRAPPC13-205ENST00000504243 ZSCAN20P17040 1043 aaPredicted RBP6.52□□□□□ -1.37
TRAPPC13-205ENST00000504243 ENPP1P22413 925 aa6.52□□□□□ -1.37
TRAPPC13-205ENST00000504243 ECE1P42892 770 aa6.52□□□□□ -1.37
TRAPPC13-205ENST00000504243 NFE2Q16621 373 aaPredicted RBP6.52□□□□□ -1.37
TRAPPC13-205ENST00000504243 FSCN1Q16658 493 aaKnown RBP6.52□□□□□ -1.37
TRAPPC13-205ENST00000504243 LCE3BQ5TA77 95 aa6.52□□□□□ -1.37
TRAPPC13-205ENST00000504243 EFCAB2Q5VUJ9 269 aa6.52□□□□□ -1.37
TRAPPC13-205ENST00000504243 KYQ8NBH2 561 aa6.52□□□□□ -1.37
TRAPPC13-205ENST00000504243 ZBTB8AQ96BR9 441 aa6.52□□□□□ -1.37
TRAPPC13-205ENST00000504243 CLIC6Q96NY7 704 aa6.52□□□□□ -1.37
TRAPPC13-205ENST00000504243 TMEM209Q96SK2 561 aa6.52□□□□□ -1.37
TRAPPC13-205ENST00000504243 FOXB1Q99853 325 aa6.52□□□□□ -1.37
TRAPPC13-205ENST00000504243 GORASP1Q9BQQ3 440 aa6.52□□□□□ -1.37
TRAPPC13-205ENST00000504243 TACO1Q9BSH4 297 aaKnown RBP6.52□□□□□ -1.37
TRAPPC13-205ENST00000504243 C11orf84Q9BUA3 381 aaPredicted RBP6.52□□□□□ -1.37
TRAPPC13-205ENST00000504243 DLL4Q9NR61 685 aa6.52□□□□□ -1.37
TRAPPC13-205ENST00000504243 CCM2LQ9NUG4 571 aaPredicted RBP6.52□□□□□ -1.37
TRAPPC13-205ENST00000504243 CROTQ9UKG9 612 aa6.52□□□□□ -1.37
TRAPPC13-205ENST00000504243 USP18Q9UMW8 372 aa6.52□□□□□ -1.37
TRAPPC13-205ENST00000504243 PPP2R3BQ9Y5P8 575 aa6.52□□□□□ -1.37
TRAPPC13-205ENST00000504243 ELL2O00472 640 aaPredicted RBP6.51□□□□□ -1.37
TRAPPC13-205ENST00000504243 MAFGO15525 162 aa6.51□□□□□ -1.37
TRAPPC13-205ENST00000504243 TSPAN6O43657 245 aa6.51□□□□□ -1.37
TRAPPC13-205ENST00000504243 RECQLP46063 649 aaPredicted RBP6.51□□□□□ -1.37
TRAPPC13-205ENST00000504243 MANFP55145 182 aaKnown RBP6.51□□□□□ -1.37
TRAPPC13-205ENST00000504243 SRSF2Q01130 221 aaKnown RBP6.51□□□□□ -1.37
TRAPPC13-205ENST00000504243 NOLC1Q14978 699 aaKnown RBP eCLIP6.51□□□□□ -1.37
TRAPPC13-205ENST00000504243 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.51□□□□□ -1.37
TRAPPC13-205ENST00000504243 INAVAQ3KP66 663 aa6.51□□□□□ -1.37
TRAPPC13-205ENST00000504243 VWA3BQ502W6 1294 aa6.51□□□□□ -1.37
TRAPPC13-205ENST00000504243 KIAA1841Q6NSI8 718 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms