RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 AK2P54819 239 aa24.84■■□□□ 1.57
LSM6-203ENST00000503982 ANAPC15P60006 121 aa24.84■■□□□ 1.57
LSM6-203ENST00000503982 UGCGQ16739 394 aa24.84■■□□□ 1.57
LSM6-203ENST00000503982 TCEAL5Q5H9L2 206 aa24.84■■□□□ 1.57
LSM6-203ENST00000503982 CMTR2Q8IYT2 770 aaKnown RBP24.84■■□□□ 1.57
LSM6-203ENST00000503982 TMEM40Q8WWA1 233 aa24.84■■□□□ 1.57
LSM6-203ENST00000503982 ZNF668Q96K58 619 aaPredicted RBP24.84■■□□□ 1.57
LSM6-203ENST00000503982 ADAM2Q99965 735 aa24.84■■□□□ 1.57
LSM6-203ENST00000503982 RC3H2Q9HBD1 1191 aaKnown RBP24.84■■□□□ 1.57
LSM6-203ENST00000503982 MRPL42Q9Y6G3 142 aaKnown RBP24.84■■□□□ 1.57
LSM6-203ENST00000503982 BRWD1Q9NSI6 2320 aa24.84■■□□□ 1.57
LSM6-203ENST00000503982 ATG2AQ2TAZ0 1938 aa24.83■■□□□ 1.57
LSM6-203ENST00000503982 ZNF862O60290 1169 aa24.83■■□□□ 1.57
LSM6-203ENST00000503982 NLRP11P59045 1033 aaKnown RBP24.83■■□□□ 1.57
LSM6-203ENST00000503982 TBC1D8BQ0IIM8 1120 aa24.83■■□□□ 1.57
LSM6-203ENST00000503982 MTERF2Q49AM1 385 aa24.83■■□□□ 1.57
LSM6-203ENST00000503982 WASF1Q92558 559 aa24.83■■□□□ 1.57
LSM6-203ENST00000503982 PHF20Q9BVI0 1012 aa24.83■■□□□ 1.57
LSM6-203ENST00000503982 C1orf112Q9NSG2 853 aa24.83■■□□□ 1.57
LSM6-203ENST00000503982 ORC3Q9UBD5 711 aaPredicted RBP24.83■■□□□ 1.57
LSM6-203ENST00000503982 STK36Q9NRP7 1315 aa24.83■■□□□ 1.56
LSM6-203ENST00000503982 C5orf67F2Z3F1 127 aa24.82■■□□□ 1.56
LSM6-203ENST00000503982 M0R2N6 131 aa24.82■■□□□ 1.56
LSM6-203ENST00000503982 GRM6O15303 877 aa24.82■■□□□ 1.56
LSM6-203ENST00000503982 MGEA5O60502 916 aa24.82■■□□□ 1.56
LSM6-203ENST00000503982 PSMD10O75832 226 aa24.82■■□□□ 1.56
LSM6-203ENST00000503982 RDM1Q8NG50 284 aa24.82■■□□□ 1.56
LSM6-203ENST00000503982 CLP1Q92989 425 aaKnown RBP24.82■■□□□ 1.56
LSM6-203ENST00000503982 FNDC1Q4ZHG4 1894 aaPredicted RBP24.81■■□□□ 1.56
LSM6-203ENST00000503982 CYP3A7-CYP3A51PA0A087WV96 503 aa24.81■■□□□ 1.56
LSM6-203ENST00000503982 CYP3A7P24462 503 aa24.81■■□□□ 1.56
LSM6-203ENST00000503982 GATMP50440 423 aa24.81■■□□□ 1.56
LSM6-203ENST00000503982 MOXD1Q6UVY6 613 aa24.81■■□□□ 1.56
LSM6-203ENST00000503982 PIK3AP1Q6ZUJ8 805 aa24.81■■□□□ 1.56
LSM6-203ENST00000503982 NEK8Q86SG6 692 aa24.81■■□□□ 1.56
LSM6-203ENST00000503982 FAM228AQ86W67 206 aa24.81■■□□□ 1.56
LSM6-203ENST00000503982 LMAN2LQ9H0V9 348 aa24.81■■□□□ 1.56
LSM6-203ENST00000503982 ALG13Q9NP73 1137 aaKnown RBP24.81■■□□□ 1.56
LSM6-203ENST00000503982 XIRP2A4UGR9 3374 aa24.81■■□□□ 1.56
LSM6-203ENST00000503982 MYO7AQ13402 2215 aa24.8■■□□□ 1.56
LSM6-203ENST00000503982 TBKBP1A7MCY6 615 aa24.8■■□□□ 1.56
LSM6-203ENST00000503982 CCNT1O60563 726 aaKnown RBP24.8■■□□□ 1.56
LSM6-203ENST00000503982 GPR32O75388 356 aa24.8■■□□□ 1.56
LSM6-203ENST00000503982 NPY5RQ15761 445 aa24.8■■□□□ 1.56
LSM6-203ENST00000503982 C8orf34Q49A92 452 aa24.8■■□□□ 1.56
LSM6-203ENST00000503982 SLC24A5Q71RS6 500 aa24.8■■□□□ 1.56
LSM6-203ENST00000503982 NECAB1Q8N987 351 aa24.8■■□□□ 1.56
LSM6-203ENST00000503982 NLRP7Q8WX94 980 aa24.8■■□□□ 1.56
LSM6-203ENST00000503982 PLVAPQ9BX97 442 aa24.8■■□□□ 1.56
LSM6-203ENST00000503982 BRMS1Q9HCU9 246 aa24.8■■□□□ 1.56
LSM6-203ENST00000503982 RGS18Q9NS28 235 aa24.8■■□□□ 1.56
LSM6-203ENST00000503982 GJB4Q9NTQ9 266 aa24.8■■□□□ 1.56
LSM6-203ENST00000503982 CLDND1Q9NY35 253 aa24.8■■□□□ 1.56
LSM6-203ENST00000503982 NCOR1O75376 2440 aa24.8■■□□□ 1.56
LSM6-203ENST00000503982 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.79■■□□□ 1.56
LSM6-203ENST00000503982 DDX11L8A8MPP1 907 aa24.79■■□□□ 1.56
LSM6-203ENST00000503982 SLC37A4O43826 429 aa24.79■■□□□ 1.56
LSM6-203ENST00000503982 ZSCAN20P17040 1043 aaPredicted RBP24.79■■□□□ 1.56
LSM6-203ENST00000503982 FOSBP53539 338 aa24.79■■□□□ 1.56
LSM6-203ENST00000503982 XKR3Q5GH77 459 aa24.79■■□□□ 1.56
LSM6-203ENST00000503982 ETNPPLQ8TBG4 499 aa24.79■■□□□ 1.56
LSM6-203ENST00000503982 IGFLR1Q9H665 355 aa24.79■■□□□ 1.56
LSM6-203ENST00000503982 ATP6V0A4Q9HBG4 840 aa24.79■■□□□ 1.56
LSM6-203ENST00000503982 H3BQ06 376 aaPredicted RBP24.78■■□□□ 1.56
LSM6-203ENST00000503982 LEXMQ3ZCV2 418 aa24.78■■□□□ 1.56
LSM6-203ENST00000503982 FAM43BQ6ZT52 329 aaPredicted RBP24.78■■□□□ 1.56
LSM6-203ENST00000503982 NAP1L4Q99733 375 aaKnown RBP24.78■■□□□ 1.56
LSM6-203ENST00000503982 SH2D3AQ9BRG2 576 aa24.78■■□□□ 1.56
LSM6-203ENST00000503982 LINC00271P0C7V0 271 aa24.77■■□□□ 1.56
LSM6-203ENST00000503982 KRT2P35908 639 aa24.77■■□□□ 1.56
LSM6-203ENST00000503982 DNM2P50570 870 aa24.77■■□□□ 1.56
LSM6-203ENST00000503982 NEK4P51957 841 aa24.77■■□□□ 1.56
LSM6-203ENST00000503982 PTCRAQ6ISU1 281 aaPredicted RBP24.77■■□□□ 1.56
LSM6-203ENST00000503982 ZNF710Q8N1W2 664 aa24.77■■□□□ 1.56
LSM6-203ENST00000503982 OXER1Q8TDS5 423 aa24.77■■□□□ 1.56
LSM6-203ENST00000503982 P2RX5Q93086 422 aa24.77■■□□□ 1.56
LSM6-203ENST00000503982 PPP2R3CQ969Q6 453 aa24.77■■□□□ 1.56
LSM6-203ENST00000503982 MBOAT7Q96N66 472 aa24.77■■□□□ 1.56
LSM6-203ENST00000503982 AAASQ9NRG9 546 aa24.77■■□□□ 1.56
LSM6-203ENST00000503982 PLAGL2Q9UPG8 496 aa24.77■■□□□ 1.56
LSM6-203ENST00000503982 PCDHB12Q9Y5F1 795 aa24.77■■□□□ 1.56
LSM6-203ENST00000503982 PLXNA4Q9HCM2 1894 aa24.77■■□□□ 1.56
LSM6-203ENST00000503982 TMEM150BA6NC51 233 aa24.76■■□□□ 1.55
LSM6-203ENST00000503982 MMP1P03956 469 aa24.76■■□□□ 1.55
LSM6-203ENST00000503982 GCFC2P16383 781 aaKnown RBP24.76■■□□□ 1.55
LSM6-203ENST00000503982 GPC3P51654 580 aa24.76■■□□□ 1.55
LSM6-203ENST00000503982 PSMC5P62195 406 aa24.76■■□□□ 1.55
LSM6-203ENST00000503982 TRIM29Q14134 588 aa24.76■■□□□ 1.55
LSM6-203ENST00000503982 NAALADL2Q58DX5 795 aa24.76■■□□□ 1.55
LSM6-203ENST00000503982 FAM102BQ5T8I3 360 aa24.76■■□□□ 1.55
LSM6-203ENST00000503982 LINC01465Q8N7H1 131 aa24.76■■□□□ 1.55
LSM6-203ENST00000503982 KLHL23Q8NBE8 558 aa24.76■■□□□ 1.55
LSM6-203ENST00000503982 RNF169Q8NCN4 708 aa24.76■■□□□ 1.55
LSM6-203ENST00000503982 PABPC5Q96DU9 382 aaKnown RBP24.76■■□□□ 1.55
LSM6-203ENST00000503982 C9IYK1 514 aa24.75■■□□□ 1.55
LSM6-203ENST00000503982 NCK2O43639 380 aa24.75■■□□□ 1.55
LSM6-203ENST00000503982 DKC1O60832 514 aaKnown RBP eCLIP24.75■■□□□ 1.55
LSM6-203ENST00000503982 BAG4O95429 457 aaKnown RBP24.75■■□□□ 1.55
LSM6-203ENST00000503982 LARGE1O95461 756 aa24.75■■□□□ 1.55
LSM6-203ENST00000503982 CTDNEP1O95476 244 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms