RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 CLP1Q92989 425 aaKnown RBP21.92■■□□□ 1.1
UBE2D3-215ENST00000503418 MAP7D2Q96T17 732 aa21.92■■□□□ 1.1
UBE2D3-215ENST00000503418 DDX25Q9UHL0 483 aaKnown RBP21.92■■□□□ 1.1
UBE2D3-215ENST00000503418 ST3GAL5Q9UNP4 418 aa21.92■■□□□ 1.1
UBE2D3-215ENST00000503418 MUC3AQ02505 3323 aa21.91■■□□□ 1.1
UBE2D3-215ENST00000503418 C5orf67F2Z3F1 127 aa21.91■■□□□ 1.1
UBE2D3-215ENST00000503418 GPR182O15218 404 aa21.91■■□□□ 1.1
UBE2D3-215ENST00000503418 GPR32O75388 356 aa21.91■■□□□ 1.1
UBE2D3-215ENST00000503418 CSPG5O95196 566 aa21.91■■□□□ 1.1
UBE2D3-215ENST00000503418 SARSP49591 514 aaKnown RBP21.91■■□□□ 1.1
UBE2D3-215ENST00000503418 MOXD1Q6UVY6 613 aa21.91■■□□□ 1.1
UBE2D3-215ENST00000503418 CMTR2Q8IYT2 770 aaKnown RBP21.91■■□□□ 1.1
UBE2D3-215ENST00000503418 CRIPAKQ8N1N5 446 aa21.91■■□□□ 1.1
UBE2D3-215ENST00000503418 RDM1Q8NG50 284 aa21.91■■□□□ 1.1
UBE2D3-215ENST00000503418 ETNPPLQ8TBG4 499 aa21.91■■□□□ 1.1
UBE2D3-215ENST00000503418 ADAM2Q99965 735 aa21.91■■□□□ 1.1
UBE2D3-215ENST00000503418 GJB4Q9NTQ9 266 aa21.91■■□□□ 1.1
UBE2D3-215ENST00000503418 ORC3Q9UBD5 711 aaPredicted RBP21.91■■□□□ 1.1
UBE2D3-215ENST00000503418 PCDHB7Q9Y5E2 793 aa21.91■■□□□ 1.1
UBE2D3-215ENST00000503418 MRPL42Q9Y6G3 142 aaKnown RBP21.91■■□□□ 1.1
UBE2D3-215ENST00000503418 SLC37A4O43826 429 aa21.9■■□□□ 1.1
UBE2D3-215ENST00000503418 KCNA5P22460 613 aa21.9■■□□□ 1.1
UBE2D3-215ENST00000503418 GATMP50440 423 aa21.9■■□□□ 1.1
UBE2D3-215ENST00000503418 NLRP11P59045 1033 aaKnown RBP21.9■■□□□ 1.1
UBE2D3-215ENST00000503418 TCEAL5Q5H9L2 206 aa21.9■■□□□ 1.1
UBE2D3-215ENST00000503418 FAM228AQ86W67 206 aa21.9■■□□□ 1.1
UBE2D3-215ENST00000503418 NECAB1Q8N987 351 aa21.9■■□□□ 1.1
UBE2D3-215ENST00000503418 MBOAT7Q96N66 472 aa21.9■■□□□ 1.1
UBE2D3-215ENST00000503418 NSUN3Q9H649 340 aaKnown RBP21.9■■□□□ 1.1
UBE2D3-215ENST00000503418 SEPT9Q9UHD8 586 aaPredicted RBP21.9■■□□□ 1.1
UBE2D3-215ENST00000503418 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.89■■□□□ 1.09
UBE2D3-215ENST00000503418 GRM6O15303 877 aa21.89■■□□□ 1.09
UBE2D3-215ENST00000503418 CTDNEP1O95476 244 aa21.89■■□□□ 1.09
UBE2D3-215ENST00000503418 TBC1D8BQ0IIM8 1120 aa21.89■■□□□ 1.09
UBE2D3-215ENST00000503418 EP400NLQ6ZTU2 488 aa21.89■■□□□ 1.09
UBE2D3-215ENST00000503418 NEK8Q86SG6 692 aa21.89■■□□□ 1.09
UBE2D3-215ENST00000503418 LINC01465Q8N7H1 131 aa21.89■■□□□ 1.09
UBE2D3-215ENST00000503418 ZNF668Q96K58 619 aaPredicted RBP21.89■■□□□ 1.09
UBE2D3-215ENST00000503418 C1orf112Q9NSG2 853 aa21.89■■□□□ 1.09
UBE2D3-215ENST00000503418 MYO7AQ13402 2215 aa21.89■■□□□ 1.09
UBE2D3-215ENST00000503418 FNDC1Q4ZHG4 1894 aaPredicted RBP21.88■■□□□ 1.09
UBE2D3-215ENST00000503418 MTERF2Q49AM1 385 aa21.88■■□□□ 1.09
UBE2D3-215ENST00000503418 PIK3AP1Q6ZUJ8 805 aa21.88■■□□□ 1.09
UBE2D3-215ENST00000503418 SLC24A5Q71RS6 500 aa21.88■■□□□ 1.09
UBE2D3-215ENST00000503418 OXER1Q8TDS5 423 aa21.88■■□□□ 1.09
UBE2D3-215ENST00000503418 WASF1Q92558 559 aa21.88■■□□□ 1.09
UBE2D3-215ENST00000503418 SCLT1Q96NL6 688 aa21.88■■□□□ 1.09
UBE2D3-215ENST00000503418 PLVAPQ9BX97 442 aa21.88■■□□□ 1.09
UBE2D3-215ENST00000503418 ALG13Q9NP73 1137 aaKnown RBP21.88■■□□□ 1.09
UBE2D3-215ENST00000503418 RGS18Q9NS28 235 aa21.88■■□□□ 1.09
UBE2D3-215ENST00000503418 NCOR1O75376 2440 aa21.88■■□□□ 1.09
UBE2D3-215ENST00000503418 TMEM150BA6NC51 233 aa21.87■■□□□ 1.09
UBE2D3-215ENST00000503418 CCNT1O60563 726 aaKnown RBP21.87■■□□□ 1.09
UBE2D3-215ENST00000503418 LARGE1O95461 756 aa21.87■■□□□ 1.09
UBE2D3-215ENST00000503418 ME3Q16798 604 aa21.87■■□□□ 1.09
UBE2D3-215ENST00000503418 B3GNT9Q6UX72 402 aa21.87■■□□□ 1.09
UBE2D3-215ENST00000503418 FAM43BQ6ZT52 329 aaPredicted RBP21.87■■□□□ 1.09
UBE2D3-215ENST00000503418 LMAN2LQ9H0V9 348 aa21.87■■□□□ 1.09
UBE2D3-215ENST00000503418 RNF216Q9NWF9 866 aaPredicted RBP21.87■■□□□ 1.09
UBE2D3-215ENST00000503418 C9IYK1 514 aa21.86■■□□□ 1.09
UBE2D3-215ENST00000503418 EIF5BO60841 1220 aaKnown RBP21.86■■□□□ 1.09
UBE2D3-215ENST00000503418 CENPBP07199 599 aaPredicted RBP21.86■■□□□ 1.09
UBE2D3-215ENST00000503418 NEK4P51957 841 aa21.86■■□□□ 1.09
UBE2D3-215ENST00000503418 LEXMQ3ZCV2 418 aa21.86■■□□□ 1.09
UBE2D3-215ENST00000503418 XKR3Q5GH77 459 aa21.86■■□□□ 1.09
UBE2D3-215ENST00000503418 SPOUT1Q5T280 376 aaKnown RBP21.86■■□□□ 1.09
UBE2D3-215ENST00000503418 GTF3C6Q969F1 213 aa21.86■■□□□ 1.09
UBE2D3-215ENST00000503418 SH2D3AQ9BRG2 576 aa21.86■■□□□ 1.09
UBE2D3-215ENST00000503418 ADAMTS10Q9H324 1103 aa21.86■■□□□ 1.09
UBE2D3-215ENST00000503418 TBKBP1A7MCY6 615 aa21.85■■□□□ 1.09
UBE2D3-215ENST00000503418 DDX11L8A8MPP1 907 aa21.85■■□□□ 1.09
UBE2D3-215ENST00000503418 MARCH6O60337 910 aa21.85■■□□□ 1.09
UBE2D3-215ENST00000503418 GCFC2P16383 781 aaKnown RBP21.85■■□□□ 1.09
UBE2D3-215ENST00000503418 EIF4BP23588 611 aaKnown RBP21.85■■□□□ 1.09
UBE2D3-215ENST00000503418 GPC3P51654 580 aa21.85■■□□□ 1.09
UBE2D3-215ENST00000503418 TARBP2Q15633 366 aaKnown RBP21.85■■□□□ 1.09
UBE2D3-215ENST00000503418 FAM102BQ5T8I3 360 aa21.85■■□□□ 1.09
UBE2D3-215ENST00000503418 PPP4R3AQ6IN85 833 aa21.85■■□□□ 1.09
UBE2D3-215ENST00000503418 ZNF710Q8N1W2 664 aa21.85■■□□□ 1.09
UBE2D3-215ENST00000503418 NLRP7Q8WX94 980 aa21.85■■□□□ 1.09
UBE2D3-215ENST00000503418 P2RX5Q93086 422 aa21.85■■□□□ 1.09
UBE2D3-215ENST00000503418 NIFKQ9BYG3 293 aaKnown RBP21.85■■□□□ 1.09
UBE2D3-215ENST00000503418 BRMS1Q9HCU9 246 aa21.85■■□□□ 1.09
UBE2D3-215ENST00000503418 PLAGL2Q9UPG8 496 aa21.85■■□□□ 1.09
UBE2D3-215ENST00000503418 H3BQ06 376 aaPredicted RBP21.84■■□□□ 1.09
UBE2D3-215ENST00000503418 EML1O00423 815 aa21.84■■□□□ 1.09
UBE2D3-215ENST00000503418 MMP1P03956 469 aa21.84■■□□□ 1.09
UBE2D3-215ENST00000503418 FDPSP14324 419 aaKnown RBP21.84■■□□□ 1.09
UBE2D3-215ENST00000503418 KRT2P35908 639 aa21.84■■□□□ 1.09
UBE2D3-215ENST00000503418 FOSBP53539 338 aa21.84■■□□□ 1.09
UBE2D3-215ENST00000503418 NR5A1Q13285 461 aa21.84■■□□□ 1.09
UBE2D3-215ENST00000503418 EARS2Q5JPH6 523 aaKnown RBP21.84■■□□□ 1.09
UBE2D3-215ENST00000503418 KLHL23Q8NBE8 558 aa21.84■■□□□ 1.09
UBE2D3-215ENST00000503418 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.84■■□□□ 1.09
UBE2D3-215ENST00000503418 PABPC5Q96DU9 382 aaKnown RBP21.84■■□□□ 1.09
UBE2D3-215ENST00000503418 FAM20AQ96MK3 541 aa21.84■■□□□ 1.09
UBE2D3-215ENST00000503418 NAP1L4Q99733 375 aaKnown RBP21.84■■□□□ 1.09
UBE2D3-215ENST00000503418 ATP6V0A4Q9HBG4 840 aa21.84■■□□□ 1.09
UBE2D3-215ENST00000503418 KCNMB3Q9NPA1 279 aa21.84■■□□□ 1.09
UBE2D3-215ENST00000503418 CLDND1Q9NY35 253 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms