RNA–Protein interactions for RNA: ENST00000503315.5

PTCD2-206, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 1,440 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-206ENST00000503315 VPS37AQ8NEZ2 397 aa8.46□□□□□ -1.05
PTCD2-206ENST00000503315 PAGR1Q9BTK6 254 aa8.46□□□□□ -1.05
PTCD2-206ENST00000503315 MRIQ9BWK5 157 aa8.46□□□□□ -1.05
PTCD2-206ENST00000503315 SOX17Q9H6I2 414 aaPredicted RBP8.46□□□□□ -1.05
PTCD2-206ENST00000503315 TDRD3Q9H7E2 651 aaKnown RBP8.46□□□□□ -1.05
PTCD2-206ENST00000503315 PLCB1Q9NQ66 1216 aa8.46□□□□□ -1.05
PTCD2-206ENST00000503315 ZNF70Q9UC06 446 aaPredicted RBP8.46□□□□□ -1.05
PTCD2-206ENST00000503315 MYH2Q9UKX2 1941 aa8.46□□□□□ -1.06
PTCD2-206ENST00000503315 TCRBV16S1A1N1A0A5B0 115 aa8.46□□□□□ -1.06
PTCD2-206ENST00000503315 TNRC18O15417 2968 aaPredicted RBP8.46□□□□□ -1.06
PTCD2-206ENST00000503315 SELPP16109 830 aa8.46□□□□□ -1.06
PTCD2-206ENST00000503315 GRIA2P42262 883 aa8.46□□□□□ -1.06
PTCD2-206ENST00000503315 INHBEP58166 350 aa8.46□□□□□ -1.06
PTCD2-206ENST00000503315 SREBF2Q12772 1141 aa8.46□□□□□ -1.06
PTCD2-206ENST00000503315 PDE3AQ14432 1141 aa8.46□□□□□ -1.06
PTCD2-206ENST00000503315 ATP13A4Q4VNC1 1196 aa8.46□□□□□ -1.06
PTCD2-206ENST00000503315 TMEM240Q5SV17 173 aa8.46□□□□□ -1.06
PTCD2-206ENST00000503315 ZCCHC8Q6NZY4 707 aaKnown RBP8.46□□□□□ -1.06
PTCD2-206ENST00000503315 MRPL14Q6P1L8 145 aaKnown RBP8.46□□□□□ -1.06
PTCD2-206ENST00000503315 C1orf228Q6PIY5 440 aa8.46□□□□□ -1.06
PTCD2-206ENST00000503315 ELMSAN1Q6PJG2 1045 aa8.46□□□□□ -1.06
PTCD2-206ENST00000503315 CYFIP1Q7L576 1253 aa8.46□□□□□ -1.06
PTCD2-206ENST00000503315 DZIP1LQ8IYY4 767 aaKnown RBP8.46□□□□□ -1.06
PTCD2-206ENST00000503315 CPA6Q8N4T0 437 aa8.46□□□□□ -1.06
PTCD2-206ENST00000503315 TEPSINQ96N21 525 aa8.46□□□□□ -1.06
PTCD2-206ENST00000503315 MTA3Q9BTC8 594 aa8.46□□□□□ -1.06
PTCD2-206ENST00000503315 KLHL25Q9H0H3 589 aa8.46□□□□□ -1.06
PTCD2-206ENST00000503315 VEZTQ9HBM0 779 aa8.46□□□□□ -1.06
PTCD2-206ENST00000503315 SMC4Q9NTJ3 1288 aa8.46□□□□□ -1.06
PTCD2-206ENST00000503315 DNAJB12Q9NXW2 375 aaKnown RBP8.46□□□□□ -1.06
PTCD2-206ENST00000503315 APEX2Q9UBZ4 518 aa8.46□□□□□ -1.06
PTCD2-206ENST00000503315 ZNF69Q9UC07 566 aa8.46□□□□□ -1.06
PTCD2-206ENST00000503315 ZKSCAN5Q9Y2L8 839 aa8.46□□□□□ -1.06
PTCD2-206ENST00000503315 DCDC2CA8MYV0 355 aa8.45□□□□□ -1.06
PTCD2-206ENST00000503315 GPR25O00155 361 aa8.45□□□□□ -1.06
PTCD2-206ENST00000503315 EYA2O00167 538 aa8.45□□□□□ -1.06
PTCD2-206ENST00000503315 AQP7O14520 342 aa8.45□□□□□ -1.06
PTCD2-206ENST00000503315 RGS13O14921 159 aa8.45□□□□□ -1.06
PTCD2-206ENST00000503315 MT-CO1P00395 513 aa8.45□□□□□ -1.06
PTCD2-206ENST00000503315 CFBP00751 764 aa8.45□□□□□ -1.06
PTCD2-206ENST00000503315 ZBTB48P10074 688 aaPredicted RBP8.45□□□□□ -1.06
PTCD2-206ENST00000503315 SMPD1P17405 629 aa8.45□□□□□ -1.06
PTCD2-206ENST00000503315 LIG1P18858 919 aa8.45□□□□□ -1.06
PTCD2-206ENST00000503315 CD33P20138 364 aa8.45□□□□□ -1.06
PTCD2-206ENST00000503315 ADCY1Q08828 1119 aa8.45□□□□□ -1.06
PTCD2-206ENST00000503315 CHAF1AQ13111 956 aaPredicted RBP8.45□□□□□ -1.06
PTCD2-206ENST00000503315 TNFAIP1Q13829 316 aa8.45□□□□□ -1.06
PTCD2-206ENST00000503315 POU4F3Q15319 338 aa8.45□□□□□ -1.06
PTCD2-206ENST00000503315 HP1BP3Q5SSJ5 553 aaPredicted RBP8.45□□□□□ -1.06
PTCD2-206ENST00000503315 GPR158Q5T848 1215 aa8.45□□□□□ -1.06
PTCD2-206ENST00000503315 TOGARAM2Q6ZUX3 1019 aa8.45□□□□□ -1.06
PTCD2-206ENST00000503315 ATG9AQ7Z3C6 839 aa8.45□□□□□ -1.06
PTCD2-206ENST00000503315 CTU1Q7Z7A3 348 aaKnown RBP8.45□□□□□ -1.06
PTCD2-206ENST00000503315 FAM35AQ86V20 835 aa8.45□□□□□ -1.06
PTCD2-206ENST00000503315 SLFN12Q8IYM2 578 aa8.45□□□□□ -1.06
PTCD2-206ENST00000503315 CACTIN-AS1Q8N1I8 211 aa8.45□□□□□ -1.06
PTCD2-206ENST00000503315 ACRBPQ8NEB7 543 aa8.45□□□□□ -1.06
PTCD2-206ENST00000503315 TBC1D22AQ8WUA7 517 aa8.45□□□□□ -1.06
PTCD2-206ENST00000503315 HPS1Q92902 700 aa8.45□□□□□ -1.06
PTCD2-206ENST00000503315 GJA10Q969M2 543 aa8.45□□□□□ -1.06
PTCD2-206ENST00000503315 AHCYL2Q96HN2 611 aaKnown RBP8.45□□□□□ -1.06
PTCD2-206ENST00000503315 CLMNQ96JQ2 1002 aa8.45□□□□□ -1.06
PTCD2-206ENST00000503315 LRGUKQ96M69 825 aa8.45□□□□□ -1.06
PTCD2-206ENST00000503315 R3HDMLQ9H3Y0 253 aa8.45□□□□□ -1.06
PTCD2-206ENST00000503315 NLRC4Q9NPP4 1024 aa8.45□□□□□ -1.06
PTCD2-206ENST00000503315 CRTAC1Q9NQ79 661 aa8.45□□□□□ -1.06
PTCD2-206ENST00000503315 SAMD15Q9P1V8 674 aa8.45□□□□□ -1.06
PTCD2-206ENST00000503315 SAP30BPQ9UHR5 308 aaKnown RBP8.45□□□□□ -1.06
PTCD2-206ENST00000503315 ZBTB21Q9ULJ3 1066 aa8.45□□□□□ -1.06
PTCD2-206ENST00000503315 AKT3Q9Y243 479 aa8.45□□□□□ -1.06
PTCD2-206ENST00000503315 KIF16BQ96L93 1317 aa8.45□□□□□ -1.06
PTCD2-206ENST00000503315 MANSC4A6NHS7 340 aaPredicted RBP8.44□□□□□ -1.06
PTCD2-206ENST00000503315 H3BRJ5 948 aa8.44□□□□□ -1.06
PTCD2-206ENST00000503315 K7ESF4 209 aa8.44□□□□□ -1.06
PTCD2-206ENST00000503315 M0R2C6 588 aa8.44□□□□□ -1.06
PTCD2-206ENST00000503315 FRAT2O75474 233 aaPredicted RBP8.44□□□□□ -1.06
PTCD2-206ENST00000503315 FKBP9O95302 570 aa8.44□□□□□ -1.06
PTCD2-206ENST00000503315 IFIT1P09914 478 aaKnown RBP8.44□□□□□ -1.06
PTCD2-206ENST00000503315 CPB1P15086 417 aa8.44□□□□□ -1.06
PTCD2-206ENST00000503315 IREB2P48200 963 aaKnown RBP8.44□□□□□ -1.06
PTCD2-206ENST00000503315 SLC9A5Q14940 896 aa8.44□□□□□ -1.06
PTCD2-206ENST00000503315 PUM3Q15397 648 aaKnown RBP8.44□□□□□ -1.06
PTCD2-206ENST00000503315 PKN2Q16513 984 aaKnown RBP8.44□□□□□ -1.06
PTCD2-206ENST00000503315 FKBP9P1Q75LS8 142 aa8.44□□□□□ -1.06
PTCD2-206ENST00000503315 TMEM192Q8IY95 271 aa8.44□□□□□ -1.06
PTCD2-206ENST00000503315 LPIN2Q92539 896 aa8.44□□□□□ -1.06
PTCD2-206ENST00000503315 ACSF2Q96CM8 615 aaPredicted RBP8.44□□□□□ -1.06
PTCD2-206ENST00000503315 SCLYQ96I15 445 aa8.44□□□□□ -1.06
PTCD2-206ENST00000503315 CCDC74BQ96LY2 380 aa8.44□□□□□ -1.06
PTCD2-206ENST00000503315 AIFM3Q96NN9 605 aa8.44□□□□□ -1.06
PTCD2-206ENST00000503315 ORAI3Q9BRQ5 295 aa8.44□□□□□ -1.06
PTCD2-206ENST00000503315 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.44□□□□□ -1.06
PTCD2-206ENST00000503315 WHRNQ9P202 907 aa8.44□□□□□ -1.06
PTCD2-206ENST00000503315 RPS6KL1Q9Y6S9 549 aa8.44□□□□□ -1.06
PTCD2-206ENST00000503315 HTTP42858 3142 aa8.43□□□□□ -1.06
PTCD2-206ENST00000503315 TCP10L2B9ZVM9 353 aa8.43□□□□□ -1.06
PTCD2-206ENST00000503315 SOX1O00570 391 aaPredicted RBP8.43□□□□□ -1.06
PTCD2-206ENST00000503315 IL33O95760 270 aa8.43□□□□□ -1.06
PTCD2-206ENST00000503315 UBTFL1P0CB47 393 aaPredicted RBP8.43□□□□□ -1.06
PTCD2-206ENST00000503315 HALP42357 657 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms