RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 C6orf50Q9HD87 102 aa6.93□□□□□ -1.3
LSM3P4-201ENST00000502948 ANO2Q9NQ90 1003 aa6.93□□□□□ -1.3
LSM3P4-201ENST00000502948 SH3GLB2Q9NR46 395 aa6.93□□□□□ -1.3
LSM3P4-201ENST00000502948 STK39Q9UEW8 545 aa6.93□□□□□ -1.3
LSM3P4-201ENST00000502948 BRPF3Q9ULD4 1205 aa6.93□□□□□ -1.3
LSM3P4-201ENST00000502948 ST3GAL5Q9UNP4 418 aa6.93□□□□□ -1.3
LSM3P4-201ENST00000502948 NOC2LQ9Y3T9 749 aaKnown RBP6.93□□□□□ -1.3
LSM3P4-201ENST00000502948 IRAK3Q9Y616 596 aa6.93□□□□□ -1.3
LSM3P4-201ENST00000502948 V9GY48 417 aaPredicted RBP6.93□□□□□ -1.3
LSM3P4-201ENST00000502948 C5orf42Q9H799 3197 aa6.93□□□□□ -1.3
LSM3P4-201ENST00000502948 A0A0U1RQF3 1178 aa6.92□□□□□ -1.3
LSM3P4-201ENST00000502948 hCG_1642624A0A1W2PR95 340 aa6.92□□□□□ -1.3
LSM3P4-201ENST00000502948 DENND3A2RUS2 1198 aa6.92□□□□□ -1.3
LSM3P4-201ENST00000502948 WDR64B1ANS9 1081 aa6.92□□□□□ -1.3
LSM3P4-201ENST00000502948 BACH1O14867 736 aa6.92□□□□□ -1.3
LSM3P4-201ENST00000502948 LINC01565O15544 149 aa6.92□□□□□ -1.3
LSM3P4-201ENST00000502948 GLP2RO95838 553 aa6.92□□□□□ -1.3
LSM3P4-201ENST00000502948 EIF4BP23588 611 aaKnown RBP6.92□□□□□ -1.3
LSM3P4-201ENST00000502948 CDC27P30260 824 aa6.92□□□□□ -1.3
LSM3P4-201ENST00000502948 ZNF76P36508 570 aa6.92□□□□□ -1.3
LSM3P4-201ENST00000502948 NHLH1Q02575 133 aa6.92□□□□□ -1.3
LSM3P4-201ENST00000502948 SIGLEC14Q08ET2 396 aa6.92□□□□□ -1.3
LSM3P4-201ENST00000502948 NFX1Q12986 1120 aaKnown RBP6.92□□□□□ -1.3
LSM3P4-201ENST00000502948 GIT2Q14161 759 aa6.92□□□□□ -1.3
LSM3P4-201ENST00000502948 NTRK3Q16288 839 aa6.92□□□□□ -1.3
LSM3P4-201ENST00000502948 SWSAP1Q6NVH7 229 aa6.92□□□□□ -1.3
LSM3P4-201ENST00000502948 PDXDC2PQ6P474 469 aa6.92□□□□□ -1.3
LSM3P4-201ENST00000502948 MOXD1Q6UVY6 613 aa6.92□□□□□ -1.3
LSM3P4-201ENST00000502948 TRIM67Q6ZTA4 783 aa6.92□□□□□ -1.3
LSM3P4-201ENST00000502948 HFE2Q6ZVN8 426 aa6.92□□□□□ -1.3
LSM3P4-201ENST00000502948 ADGRD2Q7Z7M1 963 aa6.92□□□□□ -1.3
LSM3P4-201ENST00000502948 FAM228AQ86W67 206 aa6.92□□□□□ -1.3
LSM3P4-201ENST00000502948 REXO1Q8N1G1 1221 aaKnown RBP6.92□□□□□ -1.3
LSM3P4-201ENST00000502948 LRRC43Q8N309 656 aa6.92□□□□□ -1.3
LSM3P4-201ENST00000502948 CCDC148Q8NFR7 591 aa6.92□□□□□ -1.3
LSM3P4-201ENST00000502948 TRAPPC12Q8WVT3 735 aa6.92□□□□□ -1.3
LSM3P4-201ENST00000502948 MRPS27Q92552 414 aaKnown RBP6.92□□□□□ -1.3
LSM3P4-201ENST00000502948 LENG9Q96B70 501 aa6.92□□□□□ -1.3
LSM3P4-201ENST00000502948 FBXL18Q96ME1 805 aa6.92□□□□□ -1.3
LSM3P4-201ENST00000502948 ADAM2Q99965 735 aa6.92□□□□□ -1.3
LSM3P4-201ENST00000502948 ZNF577Q9BSK1 485 aa6.92□□□□□ -1.3
LSM3P4-201ENST00000502948 MRPL9Q9BYD2 267 aaKnown RBP6.92□□□□□ -1.3
LSM3P4-201ENST00000502948 S1PR5Q9H228 398 aa6.92□□□□□ -1.3
LSM3P4-201ENST00000502948 CWH43Q9H720 699 aa6.92□□□□□ -1.3
LSM3P4-201ENST00000502948 TLE6Q9H808 572 aa6.92□□□□□ -1.3
LSM3P4-201ENST00000502948 ATP6V0A4Q9HBG4 840 aa6.92□□□□□ -1.3
LSM3P4-201ENST00000502948 CHST12Q9NRB3 414 aa6.92□□□□□ -1.3
LSM3P4-201ENST00000502948 PKD2L1Q9P0L9 805 aa6.92□□□□□ -1.3
LSM3P4-201ENST00000502948 PUF60Q9UHX1 559 aaKnown RBP6.92□□□□□ -1.3
LSM3P4-201ENST00000502948 DENND4AQ7Z401 1863 aa6.92□□□□□ -1.3
LSM3P4-201ENST00000502948 CYP3A7-CYP3A51PA0A087WV96 503 aa6.91□□□□□ -1.3
LSM3P4-201ENST00000502948 IGKV6-21A0A0C4DH24 114 aa6.91□□□□□ -1.3
LSM3P4-201ENST00000502948 KLF18A0A0U1RQI7 1052 aa6.91□□□□□ -1.3
LSM3P4-201ENST00000502948 GOLGA8AA7E2F4 631 aa6.91□□□□□ -1.3
LSM3P4-201ENST00000502948 GOLGA8BA8MQT2 603 aa6.91□□□□□ -1.3
LSM3P4-201ENST00000502948 MGEA5O60502 916 aa6.91□□□□□ -1.3
LSM3P4-201ENST00000502948 ZSCAN20P17040 1043 aaPredicted RBP6.91□□□□□ -1.3
LSM3P4-201ENST00000502948 IFNAR1P17181 557 aa6.91□□□□□ -1.3
LSM3P4-201ENST00000502948 CYP3A7P24462 503 aa6.91□□□□□ -1.3
LSM3P4-201ENST00000502948 GTF2F1P35269 517 aaKnown RBP eCLIP6.91□□□□□ -1.3
LSM3P4-201ENST00000502948 NRIP1P48552 1158 aa6.91□□□□□ -1.3
LSM3P4-201ENST00000502948 METAP2P50579 478 aaKnown RBP eCLIP6.91□□□□□ -1.3
LSM3P4-201ENST00000502948 JAK3P52333 1124 aa6.91□□□□□ -1.3
LSM3P4-201ENST00000502948 ZXDAP98168 799 aa6.91□□□□□ -1.3
LSM3P4-201ENST00000502948 ITIH3Q06033 890 aa6.91□□□□□ -1.3
LSM3P4-201ENST00000502948 TMEM62Q0P6H9 643 aa6.91□□□□□ -1.3
LSM3P4-201ENST00000502948 TARBP2Q15633 366 aaKnown RBP6.91□□□□□ -1.3
LSM3P4-201ENST00000502948 ADCK5Q3MIX3 580 aa6.91□□□□□ -1.3
LSM3P4-201ENST00000502948 FAM102BQ5T8I3 360 aa6.91□□□□□ -1.3
LSM3P4-201ENST00000502948 GALNT17Q6IS24 598 aa6.91□□□□□ -1.3
LSM3P4-201ENST00000502948 B3GNT9Q6UX72 402 aa6.91□□□□□ -1.3
LSM3P4-201ENST00000502948 CENPQQ7L2Z9 268 aaPredicted RBP6.91□□□□□ -1.3
LSM3P4-201ENST00000502948 ZNF598Q86UK7 904 aaKnown RBP6.91□□□□□ -1.3
LSM3P4-201ENST00000502948 RASEFQ8IZ41 740 aa6.91□□□□□ -1.3
LSM3P4-201ENST00000502948 COLGALT1Q8NBJ5 622 aa6.91□□□□□ -1.3
LSM3P4-201ENST00000502948 MBOAT7Q96N66 472 aa6.91□□□□□ -1.3
LSM3P4-201ENST00000502948 NECTIN4Q96NY8 510 aa6.91□□□□□ -1.3
LSM3P4-201ENST00000502948 CASD1Q96PB1 797 aa6.91□□□□□ -1.3
LSM3P4-201ENST00000502948 MAP7D2Q96T17 732 aa6.91□□□□□ -1.3
LSM3P4-201ENST00000502948 NIFKQ9BYG3 293 aaKnown RBP6.91□□□□□ -1.3
LSM3P4-201ENST00000502948 LRRC2Q9BYS8 371 aa6.91□□□□□ -1.3
LSM3P4-201ENST00000502948 ADAMTS10Q9H324 1103 aa6.91□□□□□ -1.3
LSM3P4-201ENST00000502948 IGFLR1Q9H665 355 aa6.91□□□□□ -1.3
LSM3P4-201ENST00000502948 CDHR5Q9HBB8 845 aa6.91□□□□□ -1.3
LSM3P4-201ENST00000502948 NRBP2Q9NSY0 501 aa6.91□□□□□ -1.3
LSM3P4-201ENST00000502948 TYW1Q9NV66 732 aaKnown RBP6.91□□□□□ -1.3
LSM3P4-201ENST00000502948 DACT1Q9NYF0 836 aa6.91□□□□□ -1.3
LSM3P4-201ENST00000502948 DAXXQ9UER7 740 aaPredicted RBP6.91□□□□□ -1.3
LSM3P4-201ENST00000502948 TCEAL9Q9UHQ7 104 aa6.91□□□□□ -1.3
LSM3P4-201ENST00000502948 MUTYHQ9UIF7 546 aa6.91□□□□□ -1.3
LSM3P4-201ENST00000502948 USP15Q9Y4E8 981 aaPredicted RBP6.91□□□□□ -1.3
LSM3P4-201ENST00000502948 PPME1Q9Y570 386 aa6.91□□□□□ -1.3
LSM3P4-201ENST00000502948 TBKBP1A7MCY6 615 aa6.9□□□□□ -1.3
LSM3P4-201ENST00000502948 ZNF623O75123 536 aa6.9□□□□□ -1.3
LSM3P4-201ENST00000502948 CDC45O75419 566 aa6.9□□□□□ -1.3
LSM3P4-201ENST00000502948 C1RP00736 705 aa6.9□□□□□ -1.3
LSM3P4-201ENST00000502948 OATP04181 439 aa6.9□□□□□ -1.3
LSM3P4-201ENST00000502948 SKIP12755 728 aa6.9□□□□□ -1.3
LSM3P4-201ENST00000502948 DARSP14868 501 aaKnown RBP6.9□□□□□ -1.3
LSM3P4-201ENST00000502948 HSPA4P34932 840 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms