RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 JPH2Q9BR39 696 aaPredicted RBP28.03■■■□□ 2.08
LSM6-202ENST00000502781 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.03■■■□□ 2.08
LSM6-202ENST00000502781 CDY2AQ9Y6F7 541 aa28.03■■■□□ 2.08
LSM6-202ENST00000502781 MYH15Q9Y2K3 1946 aa28.02■■■□□ 2.08
LSM6-202ENST00000502781 A0A1W2PPC1 479 aa28.02■■■□□ 2.08
LSM6-202ENST00000502781 PSRC1Q6PGN9 363 aaPredicted RBP28.02■■■□□ 2.08
LSM6-202ENST00000502781 KCTD17Q8N5Z5 321 aa28.02■■■□□ 2.08
LSM6-202ENST00000502781 SLC7A3Q8WY07 619 aa28.02■■■□□ 2.08
LSM6-202ENST00000502781 OSBPL7Q9BZF2 842 aa28.02■■■□□ 2.08
LSM6-202ENST00000502781 SUGCTQ9HAC7 445 aa28.02■■■□□ 2.08
LSM6-202ENST00000502781 DAXXQ9UER7 740 aaPredicted RBP28.02■■■□□ 2.08
LSM6-202ENST00000502781 KIAA1024Q9UPX6 916 aa28.02■■■□□ 2.08
LSM6-202ENST00000502781 PPP6R2O75170 966 aa28.01■■■□□ 2.07
LSM6-202ENST00000502781 DNM1Q05193 864 aaKnown RBP28.01■■■□□ 2.07
LSM6-202ENST00000502781 DRP2Q13474 957 aa28.01■■■□□ 2.07
LSM6-202ENST00000502781 STK38Q15208 465 aa28.01■■■□□ 2.07
LSM6-202ENST00000502781 C9orf50Q5SZB4 431 aa28.01■■■□□ 2.07
LSM6-202ENST00000502781 ZNF365Q70YC5 407 aa28.01■■■□□ 2.07
LSM6-202ENST00000502781 DEFB128Q7Z7B8 93 aa28.01■■■□□ 2.07
LSM6-202ENST00000502781 ZNF710Q8N1W2 664 aa28.01■■■□□ 2.07
LSM6-202ENST00000502781 MAP7D2Q96T17 732 aa28.01■■■□□ 2.07
LSM6-202ENST00000502781 CELF4Q9BZC1 486 aaKnown RBP28.01■■■□□ 2.07
LSM6-202ENST00000502781 CSRNP2Q9H175 543 aa28.01■■■□□ 2.07
LSM6-202ENST00000502781 TRPV2Q9Y5S1 764 aa28.01■■■□□ 2.07
LSM6-202ENST00000502781 SQORQ9Y6N5 450 aa28.01■■■□□ 2.07
LSM6-202ENST00000502781 SCN5AQ14524 2016 aa28.01■■■□□ 2.07
LSM6-202ENST00000502781 EVPLQ92817 2033 aa28.01■■■□□ 2.07
LSM6-202ENST00000502781 TET1Q8NFU7 2136 aa28.01■■■□□ 2.07
LSM6-202ENST00000502781 SPTLC2O15270 562 aa28■■■□□ 2.07
LSM6-202ENST00000502781 POLGP54098 1239 aaPredicted RBP28■■■□□ 2.07
LSM6-202ENST00000502781 NUCB2P80303 420 aa28■■■□□ 2.07
LSM6-202ENST00000502781 TMEM62Q0P6H9 643 aa28■■■□□ 2.07
LSM6-202ENST00000502781 GRB10Q13322 594 aa28■■■□□ 2.07
LSM6-202ENST00000502781 FOXD4L6Q3SYB3 417 aaPredicted RBP28■■■□□ 2.07
LSM6-202ENST00000502781 FOXD4L3Q6VB84 417 aaPredicted RBP28■■■□□ 2.07
LSM6-202ENST00000502781 TDHQ8IZJ6 230 aa28■■■□□ 2.07
LSM6-202ENST00000502781 KRI1Q8N9T8 703 aaKnown RBP28■■■□□ 2.07
LSM6-202ENST00000502781 PNMA5Q96PV4 448 aa28■■■□□ 2.07
LSM6-202ENST00000502781 XPNPEP1Q9NQW7 623 aa28■■■□□ 2.07
LSM6-202ENST00000502781 DDX19AQ9NUU7 478 aaKnown RBP28■■■□□ 2.07
LSM6-202ENST00000502781 TRIOBPQ9H2D6 2365 aa28■■■□□ 2.07
LSM6-202ENST00000502781 GAS2O43903 313 aaKnown RBP27.99■■■□□ 2.07
LSM6-202ENST00000502781 GPR32O75388 356 aa27.99■■■□□ 2.07
LSM6-202ENST00000502781 DGAT1O75907 488 aa27.99■■■□□ 2.07
LSM6-202ENST00000502781 VTNP04004 478 aa27.99■■■□□ 2.07
LSM6-202ENST00000502781 EMC2Q15006 297 aa27.99■■■□□ 2.07
LSM6-202ENST00000502781 SHHQ15465 462 aa27.99■■■□□ 2.07
LSM6-202ENST00000502781 FBXO47Q5MNV8 452 aa27.99■■■□□ 2.07
LSM6-202ENST00000502781 RASIP1Q5U651 963 aa27.99■■■□□ 2.07
LSM6-202ENST00000502781 CABP7Q86V35 215 aa27.99■■■□□ 2.07
LSM6-202ENST00000502781 CLIC6Q96NY7 704 aa27.99■■■□□ 2.07
LSM6-202ENST00000502781 CCSER1Q9C0I3 900 aa27.99■■■□□ 2.07
LSM6-202ENST00000502781 CFAP45Q9UL16 551 aa27.99■■■□□ 2.07
LSM6-202ENST00000502781 M0QZ92 97 aa27.99■■■□□ 2.07
LSM6-202ENST00000502781 FGBP02675 491 aa27.99■■■□□ 2.07
LSM6-202ENST00000502781 DNM2P50570 870 aa27.99■■■□□ 2.07
LSM6-202ENST00000502781 TMEM119Q4V9L6 283 aa27.99■■■□□ 2.07
LSM6-202ENST00000502781 PLEKHG4Q58EX7 1191 aa27.99■■■□□ 2.07
LSM6-202ENST00000502781 KCNK18Q7Z418 384 aa27.99■■■□□ 2.07
LSM6-202ENST00000502781 NT5C3AQ9H0P0 336 aa27.99■■■□□ 2.07
LSM6-202ENST00000502781 AKT3Q9Y243 479 aa27.99■■■□□ 2.07
LSM6-202ENST00000502781 ATP6V1DQ9Y5K8 247 aa27.99■■■□□ 2.07
LSM6-202ENST00000502781 UBA7P41226 1012 aa27.98■■■□□ 2.07
LSM6-202ENST00000502781 LPIN1Q14693 890 aa27.98■■■□□ 2.07
LSM6-202ENST00000502781 USP49Q70CQ1 688 aa27.98■■■□□ 2.07
LSM6-202ENST00000502781 HERVK_113Q902F9 699 aa27.98■■■□□ 2.07
LSM6-202ENST00000502781 ADAMTS10Q9H324 1103 aa27.98■■■□□ 2.07
LSM6-202ENST00000502781 CDHR5Q9HBB8 845 aa27.98■■■□□ 2.07
LSM6-202ENST00000502781 RCOR1Q9UKL0 485 aa27.98■■■□□ 2.07
LSM6-202ENST00000502781 DNM3Q9UQ16 869 aa27.98■■■□□ 2.07
LSM6-202ENST00000502781 E9PMD0 336 aa27.97■■■□□ 2.07
LSM6-202ENST00000502781 RBAK-RBAKDNI3L0D1 243 aa27.97■■■□□ 2.07
LSM6-202ENST00000502781 EYA4O95677 639 aa27.97■■■□□ 2.07
LSM6-202ENST00000502781 NLRP11P59045 1033 aaKnown RBP27.97■■■□□ 2.07
LSM6-202ENST00000502781 CDC42EP1Q00587 391 aa27.97■■■□□ 2.07
LSM6-202ENST00000502781 TCTN1Q2MV58 587 aa27.97■■■□□ 2.07
LSM6-202ENST00000502781 CNKSR3Q6P9H4 555 aa27.97■■■□□ 2.07
LSM6-202ENST00000502781 USP38Q8NB14 1042 aa27.97■■■□□ 2.07
LSM6-202ENST00000502781 KCNG4Q8TDN1 519 aa27.97■■■□□ 2.07
LSM6-202ENST00000502781 EPSTI1Q96J88 318 aa27.97■■■□□ 2.07
LSM6-202ENST00000502781 CCDC43Q96MW1 224 aaKnown RBP27.97■■■□□ 2.07
LSM6-202ENST00000502781 MTRQ99707 1265 aa27.97■■■□□ 2.07
LSM6-202ENST00000502781 BHMT2Q9H2M3 363 aa27.97■■■□□ 2.07
LSM6-202ENST00000502781 ATP6V0A4Q9HBG4 840 aa27.97■■■□□ 2.07
LSM6-202ENST00000502781 SUCLA2Q9P2R7 463 aaPredicted RBP27.97■■■□□ 2.07
LSM6-202ENST00000502781 ARID2Q68CP9 1835 aa27.97■■■□□ 2.07
LSM6-202ENST00000502781 SIP14410 1827 aa27.96■■■□□ 2.07
LSM6-202ENST00000502781 GHRP10912 638 aa27.96■■■□□ 2.07
LSM6-202ENST00000502781 GPC3P51654 580 aa27.96■■■□□ 2.07
LSM6-202ENST00000502781 CRYBB1P53674 252 aaPredicted RBP27.96■■■□□ 2.07
LSM6-202ENST00000502781 KIZQ2M2Z5 673 aa27.96■■■□□ 2.07
LSM6-202ENST00000502781 DBF4BQ8NFT6 615 aa27.96■■■□□ 2.07
LSM6-202ENST00000502781 SPECC1Q5M775 1068 aa27.95■■■□□ 2.06
LSM6-202ENST00000502781 PADI6Q6TGC4 694 aa27.95■■■□□ 2.06
LSM6-202ENST00000502781 TSHZ1Q6ZSZ6 1077 aa27.95■■■□□ 2.06
LSM6-202ENST00000502781 TMEM40Q8WWA1 233 aa27.95■■■□□ 2.06
LSM6-202ENST00000502781 TCP11Q8WWU5 503 aa27.95■■■□□ 2.06
LSM6-202ENST00000502781 SYMPKQ92797 1274 aaKnown RBP27.95■■■□□ 2.06
LSM6-202ENST00000502781 TMEM143Q96AN5 459 aa27.95■■■□□ 2.06
LSM6-202ENST00000502781 CHAMP1Q96JM3 812 aa27.95■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms