RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-222	ENST00000498658	LXN	Q9BS40	222 aa		11.78	□□□□□ -0.52
FXR1-222	ENST00000498658	SUGCT	Q9HAC7	445 aa		11.78	□□□□□ -0.52
FXR1-222	ENST00000498658	RTN4	Q9NQC3	1192 aa	Known RBP	11.78	□□□□□ -0.52
FXR1-222	ENST00000498658	AKT3	Q9Y243	479 aa		11.78	□□□□□ -0.52
FXR1-222	ENST00000498658	GINS2	Q9Y248	185 aa		11.78	□□□□□ -0.52
FXR1-222	ENST00000498658	YBX2	Q9Y2T7	364 aa	Known RBP	11.78	□□□□□ -0.52
FXR1-222	ENST00000498658	STK24	Q9Y6E0	443 aa		11.78	□□□□□ -0.52
FXR1-222	ENST00000498658	GBF1	Q92538	1859 aa		11.78	□□□□□ -0.52
FXR1-222	ENST00000498658	LAD1	O00515	517 aa		11.77	□□□□□ -0.53
FXR1-222	ENST00000498658	GAS2	O43903	313 aa	Known RBP	11.77	□□□□□ -0.53
FXR1-222	ENST00000498658	MAF	O75444	373 aa	Predicted RBP	11.77	□□□□□ -0.53
FXR1-222	ENST00000498658	RPS6KA5	O75582	802 aa		11.77	□□□□□ -0.53
FXR1-222	ENST00000498658	CD2BP2	O95400	341 aa	Known RBP	11.77	□□□□□ -0.53
FXR1-222	ENST00000498658	OR52Z1	P0C646	297 aa		11.77	□□□□□ -0.53
FXR1-222	ENST00000498658	FOSL2	P15408	326 aa		11.77	□□□□□ -0.53
FXR1-222	ENST00000498658	PDC	P20941	246 aa		11.77	□□□□□ -0.53
FXR1-222	ENST00000498658	CD52	P31358	61 aa		11.77	□□□□□ -0.53
FXR1-222	ENST00000498658	YWHAB	P31946	246 aa	Known RBP	11.77	□□□□□ -0.53
FXR1-222	ENST00000498658	RFC5	P40937	340 aa		11.77	□□□□□ -0.53
FXR1-222	ENST00000498658	GRIN2C	Q14957	1233 aa		11.77	□□□□□ -0.53
FXR1-222	ENST00000498658	TCTN1	Q2MV58	587 aa		11.77	□□□□□ -0.53
FXR1-222	ENST00000498658	MTERF2	Q49AM1	385 aa		11.77	□□□□□ -0.53
FXR1-222	ENST00000498658	RILPL1	Q5EBL4	403 aa		11.77	□□□□□ -0.53
FXR1-222	ENST00000498658	TTC38	Q5R3I4	469 aa		11.77	□□□□□ -0.53
FXR1-222	ENST00000498658	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	11.77	□□□□□ -0.53	8e-8	■■■■□ 24
FXR1-222	ENST00000498658	ANO5	Q75V66	913 aa		11.77	□□□□□ -0.53
FXR1-222	ENST00000498658	ERMN	Q8TAM6	284 aa		11.77	□□□□□ -0.53
FXR1-222	ENST00000498658	CEP170P1	Q96L14	293 aa		11.77	□□□□□ -0.53
FXR1-222	ENST00000498658	YME1L1	Q96TA2	773 aa		11.77	□□□□□ -0.53
FXR1-222	ENST00000498658	EIF2AK1	Q9BQI3	630 aa	Known RBP	11.77	□□□□□ -0.53
FXR1-222	ENST00000498658	RAB34	Q9BZG1	259 aa		11.77	□□□□□ -0.53
FXR1-222	ENST00000498658	AGO3	Q9H9G7	860 aa	Known RBP	11.77	□□□□□ -0.53
FXR1-222	ENST00000498658	CYP26B1	Q9NR63	512 aa		11.77	□□□□□ -0.53
FXR1-222	ENST00000498658	PADI3	Q9ULW8	664 aa		11.77	□□□□□ -0.53
FXR1-222	ENST00000498658	CDH23	Q9H251	3354 aa		11.77	□□□□□ -0.53
FXR1-222	ENST00000498658	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	11.76	□□□□□ -0.53
FXR1-222	ENST00000498658	ENPP3	O14638	875 aa		11.76	□□□□□ -0.53
FXR1-222	ENST00000498658	GPR32	O75388	356 aa		11.76	□□□□□ -0.53
FXR1-222	ENST00000498658	SLITRK3	O94933	977 aa		11.76	□□□□□ -0.53
FXR1-222	ENST00000498658	STBD1	O95210	358 aa		11.76	□□□□□ -0.53
FXR1-222	ENST00000498658	LYPLA2	O95372	231 aa		11.76	□□□□□ -0.53
FXR1-222	ENST00000498658	VTN	P04004	478 aa		11.76	□□□□□ -0.53
FXR1-222	ENST00000498658	STAG3L1	P0CL83	205 aa		11.76	□□□□□ -0.53
FXR1-222	ENST00000498658	XRCC6	P12956	609 aa	Known RBP eCLIP	11.76	□□□□□ -0.53
FXR1-222	ENST00000498658	MYOG	P15173	224 aa		11.76	□□□□□ -0.53
FXR1-222	ENST00000498658	CLCN3	P51790	818 aa		11.76	□□□□□ -0.53
FXR1-222	ENST00000498658	POLG	P54098	1239 aa	Predicted RBP	11.76	□□□□□ -0.53
FXR1-222	ENST00000498658	NLRP11	P59045	1033 aa	Known RBP	11.76	□□□□□ -0.53
FXR1-222	ENST00000498658	HTRA4	P83105	476 aa	Predicted RBP	11.76	□□□□□ -0.53
FXR1-222	ENST00000498658	CUL4A	Q13619	759 aa		11.76	□□□□□ -0.53
FXR1-222	ENST00000498658	ZNF174	Q15697	407 aa		11.76	□□□□□ -0.53
FXR1-222	ENST00000498658	KIZ	Q2M2Z5	673 aa		11.76	□□□□□ -0.53
FXR1-222	ENST00000498658	LARP1B	Q659C4	914 aa	Known RBP	11.76	□□□□□ -0.53
FXR1-222	ENST00000498658	MCTP1	Q6DN14	999 aa		11.76	□□□□□ -0.53
FXR1-222	ENST00000498658	POTEH	Q6S545	545 aa		11.76	□□□□□ -0.53
FXR1-222	ENST00000498658	ZNF410	Q86VK4	478 aa		11.76	□□□□□ -0.53
FXR1-222	ENST00000498658	TPH2	Q8IWU9	490 aa		11.76	□□□□□ -0.53
FXR1-222	ENST00000498658	LINC01465	Q8N7H1	131 aa		11.76	□□□□□ -0.53
FXR1-222	ENST00000498658	DYDC2	Q96IM9	177 aa		11.76	□□□□□ -0.53
FXR1-222	ENST00000498658	CCDC43	Q96MW1	224 aa	Known RBP	11.76	□□□□□ -0.53
FXR1-222	ENST00000498658	SCLT1	Q96NL6	688 aa		11.76	□□□□□ -0.53
FXR1-222	ENST00000498658	SAMD11	Q96NU1	681 aa		11.76	□□□□□ -0.53
FXR1-222	ENST00000498658	HSD17B14	Q9BPX1	270 aa		11.76	□□□□□ -0.53
FXR1-222	ENST00000498658	INO80B	Q9C086	356 aa	Predicted RBP	11.76	□□□□□ -0.53
FXR1-222	ENST00000498658	C1orf112	Q9NSG2	853 aa		11.76	□□□□□ -0.53
FXR1-222	ENST00000498658	COL6A3	P12111	3177 aa		11.76	□□□□□ -0.53
FXR1-222	ENST00000498658	SI	P14410	1827 aa		11.76	□□□□□ -0.53
FXR1-222	ENST00000498658	CHD9	Q3L8U1	2897 aa		11.76	□□□□□ -0.53
FXR1-222	ENST00000498658	IGKV6-21	A0A0C4DH24	114 aa		11.75	□□□□□ -0.53
FXR1-222	ENST00000498658	MUT	P22033	750 aa		11.75	□□□□□ -0.53
FXR1-222	ENST00000498658	EIF4B	P23588	611 aa	Known RBP	11.75	□□□□□ -0.53
FXR1-222	ENST00000498658	CYP4A11	Q02928	519 aa		11.75	□□□□□ -0.53
FXR1-222	ENST00000498658	TAP1	Q03518	808 aa		11.75	□□□□□ -0.53
FXR1-222	ENST00000498658	NFX1	Q12986	1120 aa	Known RBP	11.75	□□□□□ -0.53
FXR1-222	ENST00000498658	HAUS3	Q68CZ6	603 aa		11.75	□□□□□ -0.53
FXR1-222	ENST00000498658	LRRC71	Q8N4P6	559 aa		11.75	□□□□□ -0.53
FXR1-222	ENST00000498658	TCP11	Q8WWU5	503 aa		11.75	□□□□□ -0.53
FXR1-222	ENST00000498658	NLRP7	Q8WX94	980 aa		11.75	□□□□□ -0.53
FXR1-222	ENST00000498658	MYLIP	Q8WY64	445 aa		11.75	□□□□□ -0.53
FXR1-222	ENST00000498658	INTS4	Q96HW7	963 aa	Known RBP	11.75	□□□□□ -0.53
FXR1-222	ENST00000498658	OSMR	Q99650	979 aa		11.75	□□□□□ -0.53
FXR1-222	ENST00000498658	GCOM2	Q9BZD3	368 aa	Predicted RBP	11.75	□□□□□ -0.53
FXR1-222	ENST00000498658	OSBPL7	Q9BZF2	842 aa		11.75	□□□□□ -0.53
FXR1-222	ENST00000498658	TSPYL2	Q9H2G4	693 aa	Predicted RBP	11.75	□□□□□ -0.53
FXR1-222	ENST00000498658	TMEM60	Q9H2L4	133 aa		11.75	□□□□□ -0.53
FXR1-222	ENST00000498658	TUFT1	Q9NNX1	390 aa		11.75	□□□□□ -0.53
FXR1-222	ENST00000498658	ANKEF1	Q9NU02	776 aa		11.75	□□□□□ -0.53
FXR1-222	ENST00000498658	RGL1	Q9NZL6	768 aa		11.75	□□□□□ -0.53
FXR1-222	ENST00000498658	SUCLA2	Q9P2R7	463 aa	Predicted RBP	11.75	□□□□□ -0.53
FXR1-222	ENST00000498658	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.75	□□□□□ -0.53
FXR1-222	ENST00000498658	ST3GAL5	Q9UNP4	418 aa		11.75	□□□□□ -0.53
FXR1-222	ENST00000498658	NOC2L	Q9Y3T9	749 aa	Known RBP	11.75	□□□□□ -0.53
FXR1-222	ENST00000498658	PTPRS	Q13332	1948 aa		11.74	□□□□□ -0.53
FXR1-222	ENST00000498658	LOXHD1	Q8IVV2	1947 aa		11.74	□□□□□ -0.53
FXR1-222	ENST00000498658	DENND3	A2RUS2	1198 aa		11.74	□□□□□ -0.53
FXR1-222	ENST00000498658	WNT7A	O00755	349 aa		11.74	□□□□□ -0.53
FXR1-222	ENST00000498658	ASAP2	O43150	1006 aa		11.74	□□□□□ -0.53
FXR1-222	ENST00000498658	UPP2	O95045	317 aa		11.74	□□□□□ -0.53
FXR1-222	ENST00000498658	ZSCAN20	P17040	1043 aa	Predicted RBP	11.74	□□□□□ -0.53
FXR1-222	ENST00000498658	TEC	P42680	631 aa		11.74	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms