RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 FTHL17Q9BXU8 183 aa18.13■□□□□ 0.49
NR1H3-227ENST00000498548 KCNMB3Q9NPA1 279 aa18.13■□□□□ 0.49
NR1H3-227ENST00000498548 VAV3Q9UKW4 847 aa18.13■□□□□ 0.49
NR1H3-227ENST00000498548 TCF20Q9UGU0 1960 aaKnown RBP18.13■□□□□ 0.49
NR1H3-227ENST00000498548 WNT7AO00755 349 aa18.12■□□□□ 0.49
NR1H3-227ENST00000498548 DGKIO75912 1065 aa18.12■□□□□ 0.49
NR1H3-227ENST00000498548 MMP1P03956 469 aa18.12■□□□□ 0.49
NR1H3-227ENST00000498548 GCFC2P16383 781 aaKnown RBP18.12■□□□□ 0.49
NR1H3-227ENST00000498548 DRP2Q13474 957 aa18.12■□□□□ 0.49
NR1H3-227ENST00000498548 GPM6BQ13491 265 aa18.12■□□□□ 0.49
NR1H3-227ENST00000498548 TARBP2Q15633 366 aaKnown RBP18.12■□□□□ 0.49
NR1H3-227ENST00000498548 PAN2Q504Q3 1202 aaKnown RBP18.12■□□□□ 0.49
NR1H3-227ENST00000498548 DIS3L2Q8IYB7 885 aaKnown RBP18.12■□□□□ 0.49
NR1H3-227ENST00000498548 ATXN2LQ8WWM7 1075 aaKnown RBP18.12■□□□□ 0.49
NR1H3-227ENST00000498548 ZNF689Q96CS4 500 aaPredicted RBP18.12■□□□□ 0.49
NR1H3-227ENST00000498548 FAM20AQ96MK3 541 aa18.12■□□□□ 0.49
NR1H3-227ENST00000498548 TSPYL2Q9H2G4 693 aaPredicted RBP18.12■□□□□ 0.49
NR1H3-227ENST00000498548 BRMS1Q9HCU9 246 aa18.12■□□□□ 0.49
NR1H3-227ENST00000498548 TMOD1P28289 359 aa18.11■□□□□ 0.49
NR1H3-227ENST00000498548 CTNNB1P35222 781 aa18.11■□□□□ 0.49
NR1H3-227ENST00000498548 MRPS5P82675 430 aaKnown RBP18.11■□□□□ 0.49
NR1H3-227ENST00000498548 TBC1D8BQ0IIM8 1120 aa18.11■□□□□ 0.49
NR1H3-227ENST00000498548 TRIM29Q14134 588 aa18.11■□□□□ 0.49
NR1H3-227ENST00000498548 BTG3Q14201 252 aaPredicted RBP18.11■□□□□ 0.49
NR1H3-227ENST00000498548 XKR3Q5GH77 459 aa18.11■□□□□ 0.49
NR1H3-227ENST00000498548 TJAP1Q5JTD0 557 aa18.11■□□□□ 0.49
NR1H3-227ENST00000498548 PLA2G4FQ68DD2 849 aa18.11■□□□□ 0.49
NR1H3-227ENST00000498548 NCAPH2Q6IBW4 605 aa18.11■□□□□ 0.49
NR1H3-227ENST00000498548 NPAS4Q8IUM7 802 aa18.11■□□□□ 0.49
NR1H3-227ENST00000498548 SAMD11Q96NU1 681 aa18.11■□□□□ 0.49
NR1H3-227ENST00000498548 ASB2Q96Q27 587 aa18.11■□□□□ 0.49
NR1H3-227ENST00000498548 CEP89Q96ST8 783 aa18.11■□□□□ 0.49
NR1H3-227ENST00000498548 MAP7D2Q96T17 732 aa18.11■□□□□ 0.49
NR1H3-227ENST00000498548 ADAM2Q99965 735 aa18.11■□□□□ 0.49
NR1H3-227ENST00000498548 NIFKQ9BYG3 293 aaKnown RBP18.11■□□□□ 0.49
NR1H3-227ENST00000498548 ADAMTS10Q9H324 1103 aa18.11■□□□□ 0.49
NR1H3-227ENST00000498548 RC3H2Q9HBD1 1191 aaKnown RBP18.11■□□□□ 0.49
NR1H3-227ENST00000498548 ADGRA3Q8IWK6 1321 aa18.11■□□□□ 0.49
NR1H3-227ENST00000498548 RALGAPA2Q2PPJ7 1873 aa18.11■□□□□ 0.49
NR1H3-227ENST00000498548 REV3LO60673 3130 aa18.1■□□□□ 0.49
NR1H3-227ENST00000498548 COL4A6Q14031 1691 aa18.1■□□□□ 0.49
NR1H3-227ENST00000498548 GPR182O15218 404 aa18.1■□□□□ 0.49
NR1H3-227ENST00000498548 LINC00271P0C7V0 271 aa18.1■□□□□ 0.49
NR1H3-227ENST00000498548 FGFR4P22455 802 aa18.1■□□□□ 0.49
NR1H3-227ENST00000498548 PSMC5P62195 406 aa18.1■□□□□ 0.49
NR1H3-227ENST00000498548 PPP2R5CQ13362 524 aa18.1■□□□□ 0.49
NR1H3-227ENST00000498548 CRIPAKQ8N1N5 446 aa18.1■□□□□ 0.49
NR1H3-227ENST00000498548 ZNF579Q8NAF0 562 aaKnown RBP18.1■□□□□ 0.49
NR1H3-227ENST00000498548 NAP1L4Q99733 375 aaKnown RBP18.1■□□□□ 0.49
NR1H3-227ENST00000498548 LMCD1Q9NZU5 365 aa18.1■□□□□ 0.49
NR1H3-227ENST00000498548 WRAP73Q9P2S5 460 aaPredicted RBP18.1■□□□□ 0.49
NR1H3-227ENST00000498548 LRFN2Q9ULH4 789 aa18.1■□□□□ 0.49
NR1H3-227ENST00000498548 SPTBN5Q9NRC6 3674 aaKnown RBP18.1■□□□□ 0.49
NR1H3-227ENST00000498548 A0A0C4DFX4 3053 aa18.09■□□□□ 0.49
NR1H3-227ENST00000498548 DENND3A2RUS2 1198 aa18.09■□□□□ 0.49
NR1H3-227ENST00000498548 H3BNC9 293 aa18.09■□□□□ 0.49
NR1H3-227ENST00000498548 CSDE1O75534 798 aaKnown RBP18.09■□□□□ 0.49
NR1H3-227ENST00000498548 CSPG5O95196 566 aa18.09■□□□□ 0.49
NR1H3-227ENST00000498548 BAG4O95429 457 aaKnown RBP18.09■□□□□ 0.49
NR1H3-227ENST00000498548 STAG3L1P0CL83 205 aa18.09■□□□□ 0.49
NR1H3-227ENST00000498548 ATP2B1P20020 1258 aa18.09■□□□□ 0.49
NR1H3-227ENST00000498548 SARSP49591 514 aaKnown RBP18.09■□□□□ 0.49
NR1H3-227ENST00000498548 GPC3P51654 580 aa18.09■□□□□ 0.49
NR1H3-227ENST00000498548 NPEPPSP55786 919 aa18.09■□□□□ 0.49
NR1H3-227ENST00000498548 ANO5Q75V66 913 aa18.09■□□□□ 0.49
NR1H3-227ENST00000498548 DYDC2Q96IM9 177 aa18.09■□□□□ 0.49
NR1H3-227ENST00000498548 RGS18Q9NS28 235 aa18.09■□□□□ 0.49
NR1H3-227ENST00000498548 RGL1Q9NZL6 768 aa18.09■□□□□ 0.49
NR1H3-227ENST00000498548 PCDHB7Q9Y5E2 793 aa18.09■□□□□ 0.49
NR1H3-227ENST00000498548 MRPL42Q9Y6G3 142 aaKnown RBP18.09■□□□□ 0.49
NR1H3-227ENST00000498548 KIAA1671Q9BY89 1806 aa18.09■□□□□ 0.49
NR1H3-227ENST00000498548 TBX3O15119 743 aa18.08■□□□□ 0.48
NR1H3-227ENST00000498548 BMPR1AP36894 532 aa18.08■□□□□ 0.48
NR1H3-227ENST00000498548 QARSP47897 775 aaKnown RBP18.08■□□□□ 0.48
NR1H3-227ENST00000498548 KCNQ1P51787 676 aa18.08■□□□□ 0.48
NR1H3-227ENST00000498548 CTTNQ14247 550 aaKnown RBP18.08■□□□□ 0.48
NR1H3-227ENST00000498548 EPHA7Q15375 998 aa18.08■□□□□ 0.48
NR1H3-227ENST00000498548 ODR4Q5SWX8 454 aa18.08■□□□□ 0.48
NR1H3-227ENST00000498548 NLRP7Q8WX94 980 aa18.08■□□□□ 0.48
NR1H3-227ENST00000498548 SYMPKQ92797 1274 aaKnown RBP18.08■□□□□ 0.48
NR1H3-227ENST00000498548 SCLT1Q96NL6 688 aa18.08■□□□□ 0.48
NR1H3-227ENST00000498548 FNDC1Q4ZHG4 1894 aaPredicted RBP18.07■□□□□ 0.48
NR1H3-227ENST00000498548 C9IYK1 514 aa18.07■□□□□ 0.48
NR1H3-227ENST00000498548 ZBTB39O15060 712 aa18.07■□□□□ 0.48
NR1H3-227ENST00000498548 GRM6O15303 877 aa18.07■□□□□ 0.48
NR1H3-227ENST00000498548 P4HBP07237 508 aaKnown RBP18.07■□□□□ 0.48
NR1H3-227ENST00000498548 CYP4A11Q02928 519 aa18.07■□□□□ 0.48
NR1H3-227ENST00000498548 DSC3Q14574 896 aa18.07■□□□□ 0.48
NR1H3-227ENST00000498548 CALCRLQ16602 461 aa18.07■□□□□ 0.48
NR1H3-227ENST00000498548 FAM102BQ5T8I3 360 aa18.07■□□□□ 0.48
NR1H3-227ENST00000498548 KSR1Q8IVT5 923 aa18.07■□□□□ 0.48
NR1H3-227ENST00000498548 CMTR2Q8IYT2 770 aaKnown RBP18.07■□□□□ 0.48
NR1H3-227ENST00000498548 MRPL38Q96DV4 380 aaKnown RBP18.07■□□□□ 0.48
NR1H3-227ENST00000498548 C8orf76Q96K31 380 aa18.07■□□□□ 0.48
NR1H3-227ENST00000498548 ZSCAN31Q96LW9 406 aaPredicted RBP18.07■□□□□ 0.48
NR1H3-227ENST00000498548 BMP2KQ9NSY1 1161 aaPredicted RBP18.07■□□□□ 0.48
NR1H3-227ENST00000498548 SUCLA2Q9P2R7 463 aaPredicted RBP18.07■□□□□ 0.48
NR1H3-227ENST00000498548 ATG2AQ2TAZ0 1938 aa18.07■□□□□ 0.48
NR1H3-227ENST00000498548 A0A087WZ62 844 aa18.06■□□□□ 0.48
NR1H3-227ENST00000498548 IGKV6-21A0A0C4DH24 114 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms