RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 ATP6V0A4Q9HBG4 840 aa16.73■□□□□ 0.27
TRAF4-212ENST00000498540 ZNF302Q9NR11 478 aa16.73■□□□□ 0.27
TRAF4-212ENST00000498540 RNF19AQ9NV58 838 aa16.73■□□□□ 0.27
TRAF4-212ENST00000498540 RNF216Q9NWF9 866 aaPredicted RBP16.73■□□□□ 0.27
TRAF4-212ENST00000498540 CDH22Q9UJ99 828 aa16.73■□□□□ 0.27
TRAF4-212ENST00000498540 LZTS1Q9Y250 596 aa16.73■□□□□ 0.27
TRAF4-212ENST00000498540 PLXNA3P51805 1871 aa16.73■□□□□ 0.27
TRAF4-212ENST00000498540 WDR81Q562E7 1941 aa16.72■□□□□ 0.27
TRAF4-212ENST00000498540 FAM86B1E9PN63 330 aa16.72■□□□□ 0.27
TRAF4-212ENST00000498540 DHX15O43143 795 aaKnown RBP16.72■□□□□ 0.27
TRAF4-212ENST00000498540 ST18O60284 1047 aa16.72■□□□□ 0.27
TRAF4-212ENST00000498540 GPR32O75388 356 aa16.72■□□□□ 0.27
TRAF4-212ENST00000498540 VTNP04004 478 aa16.72■□□□□ 0.27
TRAF4-212ENST00000498540 FAM86B2P0C5J1 330 aa16.72■□□□□ 0.27
TRAF4-212ENST00000498540 SRGAP2BP0DMP2 458 aa16.72■□□□□ 0.27
TRAF4-212ENST00000498540 AVPR2P30518 371 aa16.72■□□□□ 0.27
TRAF4-212ENST00000498540 PBX3P40426 434 aa16.72■□□□□ 0.27
TRAF4-212ENST00000498540 CLK2P49760 499 aaKnown RBP16.72■□□□□ 0.27
TRAF4-212ENST00000498540 CRYBB1P53674 252 aaPredicted RBP16.72■□□□□ 0.27
TRAF4-212ENST00000498540 FAM189BP81408 668 aa16.72■□□□□ 0.27
TRAF4-212ENST00000498540 PLCB3Q01970 1234 aa16.72■□□□□ 0.27
TRAF4-212ENST00000498540 FUT2Q10981 343 aa16.72■□□□□ 0.27
TRAF4-212ENST00000498540 ZNF484Q5JVG2 852 aa16.72■□□□□ 0.27
TRAF4-212ENST00000498540 ODR4Q5SWX8 454 aa16.72■□□□□ 0.27
TRAF4-212ENST00000498540 CREB3L3Q68CJ9 461 aa16.72■□□□□ 0.27
TRAF4-212ENST00000498540 SWSAP1Q6NVH7 229 aa16.72■□□□□ 0.27
TRAF4-212ENST00000498540 APOA5Q6Q788 366 aa16.72■□□□□ 0.27
TRAF4-212ENST00000498540 LRRC55Q6ZSA7 311 aa16.72■□□□□ 0.27
TRAF4-212ENST00000498540 FAM43BQ6ZT52 329 aaPredicted RBP16.72■□□□□ 0.27
TRAF4-212ENST00000498540 RASGRP4Q8TDF6 673 aa16.72■□□□□ 0.27
TRAF4-212ENST00000498540 ELAC1Q9H777 363 aaKnown RBP16.72■□□□□ 0.27
TRAF4-212ENST00000498540 ENTPD7Q9NQZ7 604 aa16.72■□□□□ 0.27
TRAF4-212ENST00000498540 CFAP54Q96N23 3096 aa16.72■□□□□ 0.27
TRAF4-212ENST00000498540 SMCO2A6NFE2 343 aa16.71■□□□□ 0.27
TRAF4-212ENST00000498540 ZNF76P36508 570 aa16.71■□□□□ 0.27
TRAF4-212ENST00000498540 AP3B2Q13367 1082 aa16.71■□□□□ 0.27
TRAF4-212ENST00000498540 NECTIN1Q15223 517 aa16.71■□□□□ 0.27
TRAF4-212ENST00000498540 NIPA1Q7RTP0 329 aa16.71■□□□□ 0.27
TRAF4-212ENST00000498540 TRMT1LQ7Z2T5 733 aaKnown RBP16.71■□□□□ 0.27
TRAF4-212ENST00000498540 YTHDC1Q96MU7 727 aaKnown RBP16.71■□□□□ 0.27
TRAF4-212ENST00000498540 CASD1Q96PB1 797 aa16.71■□□□□ 0.27
TRAF4-212ENST00000498540 TMEM117Q9H0C3 514 aa16.71■□□□□ 0.27
TRAF4-212ENST00000498540 ZFHX2Q9C0A1 2572 aaPredicted RBP16.71■□□□□ 0.26
TRAF4-212ENST00000498540 IGLV3-22A0A075B6J6 115 aa16.7■□□□□ 0.26
TRAF4-212ENST00000498540 GFRA3O60609 400 aa16.7■□□□□ 0.26
TRAF4-212ENST00000498540 CLCN3P51790 818 aa16.7■□□□□ 0.26
TRAF4-212ENST00000498540 MIS18BP1Q6P0N0 1132 aa16.7■□□□□ 0.26
TRAF4-212ENST00000498540 KCNT2Q6UVM3 1135 aa16.7■□□□□ 0.26
TRAF4-212ENST00000498540 ZBTB33Q86T24 672 aa16.7■□□□□ 0.26
TRAF4-212ENST00000498540 PLA2G4DQ86XP0 818 aa16.7■□□□□ 0.26
TRAF4-212ENST00000498540 TEX2Q8IWB9 1127 aa16.7■□□□□ 0.26
TRAF4-212ENST00000498540 CKAP2LQ8IYA6 745 aa16.7■□□□□ 0.26
TRAF4-212ENST00000498540 METTL13Q8N6R0 699 aa16.7■□□□□ 0.26
TRAF4-212ENST00000498540 TSHZ2Q9NRE2 1034 aa16.7■□□□□ 0.26
TRAF4-212ENST00000498540 RBM28Q9NW13 759 aaKnown RBP16.7■□□□□ 0.26
TRAF4-212ENST00000498540 BARHL2Q9NY43 387 aa16.7■□□□□ 0.26
TRAF4-212ENST00000498540 V9GY48 417 aaPredicted RBP16.7■□□□□ 0.26
TRAF4-212ENST00000498540 IPO5O00410 1097 aaKnown RBP16.69■□□□□ 0.26
TRAF4-212ENST00000498540 RTN1Q16799 776 aa16.69■□□□□ 0.26
TRAF4-212ENST00000498540 JAKMIP3Q5VZ66 844 aa16.69■□□□□ 0.26
TRAF4-212ENST00000498540 SYNE3Q6ZMZ3 975 aa16.69■□□□□ 0.26
TRAF4-212ENST00000498540 LRRC43Q8N309 656 aa16.69■□□□□ 0.26
TRAF4-212ENST00000498540 CRYGNQ8WXF5 182 aa16.69■□□□□ 0.26
TRAF4-212ENST00000498540 BBXQ8WY36 941 aaPredicted RBP16.69■□□□□ 0.26
TRAF4-212ENST00000498540 ATOH1Q92858 354 aaPredicted RBP16.69■□□□□ 0.26
TRAF4-212ENST00000498540 TCEANC2Q96MN5 208 aa16.69■□□□□ 0.26
TRAF4-212ENST00000498540 ZNF558Q96NG5 402 aa16.69■□□□□ 0.26
TRAF4-212ENST00000498540 ESYT1Q9BSJ8 1104 aa16.69■□□□□ 0.26
TRAF4-212ENST00000498540 NGRNQ9NPE2 291 aaKnown RBP16.69■□□□□ 0.26
TRAF4-212ENST00000498540 PUF60Q9UHX1 559 aaKnown RBP16.69■□□□□ 0.26
TRAF4-212ENST00000498540 BRPF3Q9ULD4 1205 aa16.69■□□□□ 0.26
TRAF4-212ENST00000498540 MAFBQ9Y5Q3 323 aaPredicted RBP16.69■□□□□ 0.26
TRAF4-212ENST00000498540 MYO10Q9HD67 2058 aa16.69■□□□□ 0.26
TRAF4-212ENST00000498540 H0Y858 1186 aa16.68■□□□□ 0.26
TRAF4-212ENST00000498540 hCG_1984214I3L0E3 225 aa16.68■□□□□ 0.26
TRAF4-212ENST00000498540 ADAMTS3O15072 1205 aa16.68■□□□□ 0.26
TRAF4-212ENST00000498540 HOXB8P17481 243 aaPredicted RBP16.68■□□□□ 0.26
TRAF4-212ENST00000498540 CLLU1OSQ5K130 101 aa16.68■□□□□ 0.26
TRAF4-212ENST00000498540 TMC7Q7Z402 723 aa16.68■□□□□ 0.26
TRAF4-212ENST00000498540 ZNF713Q8N859 430 aaPredicted RBP16.68■□□□□ 0.26
TRAF4-212ENST00000498540 KREMEN2Q8NCW0 462 aa16.68■□□□□ 0.26
TRAF4-212ENST00000498540 RIPOR3Q96MK2 946 aa16.68■□□□□ 0.26
TRAF4-212ENST00000498540 POMKQ9H5K3 350 aa16.68■□□□□ 0.26
TRAF4-212ENST00000498540 HCFC2Q9Y5Z7 792 aa16.68■□□□□ 0.26
TRAF4-212ENST00000498540 C2CD4DB7Z1M9 353 aa16.67■□□□□ 0.26
TRAF4-212ENST00000498540 ZBTB43O43298 467 aa16.67■□□□□ 0.26
TRAF4-212ENST00000498540 HOXA2O43364 376 aa16.67■□□□□ 0.26
TRAF4-212ENST00000498540 BRD1O95696 1058 aa16.67■□□□□ 0.26
TRAF4-212ENST00000498540 PPM1AP35813 382 aa16.67■□□□□ 0.26
TRAF4-212ENST00000498540 NLRP11P59045 1033 aaKnown RBP16.67■□□□□ 0.26
TRAF4-212ENST00000498540 ZNF746Q6NUN9 644 aaPredicted RBP16.67■□□□□ 0.26
TRAF4-212ENST00000498540 ECHDC2Q86YB7 292 aa16.67■□□□□ 0.26
TRAF4-212ENST00000498540 ABI1Q8IZP0 508 aa16.67■□□□□ 0.26
TRAF4-212ENST00000498540 LINC01465Q8N7H1 131 aa16.67■□□□□ 0.26
TRAF4-212ENST00000498540 RNF169Q8NCN4 708 aa16.67■□□□□ 0.26
TRAF4-212ENST00000498540 CASP10Q92851 521 aa16.67■□□□□ 0.26
TRAF4-212ENST00000498540 ZNF668Q96K58 619 aaPredicted RBP16.67■□□□□ 0.26
TRAF4-212ENST00000498540 ZNF577Q9BSK1 485 aa16.67■□□□□ 0.26
TRAF4-212ENST00000498540 ADAMTS10Q9H324 1103 aa16.67■□□□□ 0.26
TRAF4-212ENST00000498540 SMOC2Q9H3U7 446 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms