RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 RILPL1Q5EBL4 403 aa14.33□□□□□ -0.12
HSPG2-213ENST00000498495 PLA2G4FQ68DD2 849 aa14.33□□□□□ -0.12
HSPG2-213ENST00000498495 FAM117BQ6P1L5 589 aa14.33□□□□□ -0.12
HSPG2-213ENST00000498495 TMCO2Q7Z6W1 182 aaPredicted RBP14.33□□□□□ -0.12
HSPG2-213ENST00000498495 EXOC8Q8IYI6 725 aa14.33□□□□□ -0.12
HSPG2-213ENST00000498495 NEK9Q8TD19 979 aa14.33□□□□□ -0.12
HSPG2-213ENST00000498495 PPP1R16BQ96T49 567 aa14.33□□□□□ -0.12
HSPG2-213ENST00000498495 HSD17B14Q9BPX1 270 aa14.33□□□□□ -0.12
HSPG2-213ENST00000498495 JPH2Q9BR39 696 aaPredicted RBP14.33□□□□□ -0.12
HSPG2-213ENST00000498495 FTHL17Q9BXU8 183 aa14.33□□□□□ -0.12
HSPG2-213ENST00000498495 WRAP73Q9P2S5 460 aaPredicted RBP14.33□□□□□ -0.12
HSPG2-213ENST00000498495 PADI3Q9ULW8 664 aa14.33□□□□□ -0.12
HSPG2-213ENST00000498495 PCDHB6Q9Y5E3 794 aa14.33□□□□□ -0.12
HSPG2-213ENST00000498495 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.32□□□□□ -0.12
HSPG2-213ENST00000498495 POTEMA6NI47 508 aa14.32□□□□□ -0.12
HSPG2-213ENST00000498495 GPR182O15218 404 aa14.32□□□□□ -0.12
HSPG2-213ENST00000498495 GPR32O75388 356 aa14.32□□□□□ -0.12
HSPG2-213ENST00000498495 UPP2O95045 317 aa14.32□□□□□ -0.12
HSPG2-213ENST00000498495 CA3P07451 260 aa14.32□□□□□ -0.12
HSPG2-213ENST00000498495 PDCP20941 246 aa14.32□□□□□ -0.12
HSPG2-213ENST00000498495 NPEPPSP55786 919 aa14.32□□□□□ -0.12
HSPG2-213ENST00000498495 PTGDRQ13258 359 aa14.32□□□□□ -0.12
HSPG2-213ENST00000498495 GRIN2CQ14957 1233 aa14.32□□□□□ -0.12
HSPG2-213ENST00000498495 XKR9Q5GH70 373 aa14.32□□□□□ -0.12
HSPG2-213ENST00000498495 PPP2R2DQ66LE6 453 aa14.32□□□□□ -0.12
HSPG2-213ENST00000498495 LINC01465Q8N7H1 131 aa14.32□□□□□ -0.12
HSPG2-213ENST00000498495 C4orf32Q8N8J7 132 aa14.32□□□□□ -0.12
HSPG2-213ENST00000498495 ERMNQ8TAM6 284 aa14.32□□□□□ -0.12
HSPG2-213ENST00000498495 TOP1MTQ969P6 601 aa14.32□□□□□ -0.12
HSPG2-213ENST00000498495 SNX21Q969T3 373 aa14.32□□□□□ -0.12
HSPG2-213ENST00000498495 INTS4Q96HW7 963 aaKnown RBP14.32□□□□□ -0.12
HSPG2-213ENST00000498495 CEP89Q96ST8 783 aa14.32□□□□□ -0.12
HSPG2-213ENST00000498495 CDX2Q99626 313 aaPredicted RBP14.32□□□□□ -0.12
HSPG2-213ENST00000498495 RAD9AQ99638 391 aa14.32□□□□□ -0.12
HSPG2-213ENST00000498495 OSMRQ99650 979 aa14.32□□□□□ -0.12
HSPG2-213ENST00000498495 NOC2LQ9Y3T9 749 aaKnown RBP14.32□□□□□ -0.12
HSPG2-213ENST00000498495 PPME1Q9Y570 386 aa14.32□□□□□ -0.12
HSPG2-213ENST00000498495 WDR81Q562E7 1941 aa14.32□□□□□ -0.12
HSPG2-213ENST00000498495 EVPLQ92817 2033 aa14.31□□□□□ -0.12
HSPG2-213ENST00000498495 IGKV6-21A0A0C4DH24 114 aa14.31□□□□□ -0.12
HSPG2-213ENST00000498495 LAD1O00515 517 aa14.31□□□□□ -0.12
HSPG2-213ENST00000498495 ZBTB39O15060 712 aa14.31□□□□□ -0.12
HSPG2-213ENST00000498495 LYPLA2O95372 231 aa14.31□□□□□ -0.12
HSPG2-213ENST00000498495 POLGP54098 1239 aaPredicted RBP14.31□□□□□ -0.12
HSPG2-213ENST00000498495 MKRN4PQ13434 485 aaPredicted RBP14.31□□□□□ -0.12
HSPG2-213ENST00000498495 FAM43BQ6ZT52 329 aaPredicted RBP14.31□□□□□ -0.12
HSPG2-213ENST00000498495 SLC7A3Q8WY07 619 aa14.31□□□□□ -0.12
HSPG2-213ENST00000498495 SCLT1Q96NL6 688 aa14.31□□□□□ -0.12
HSPG2-213ENST00000498495 GUCD1Q96NT3 240 aa14.31□□□□□ -0.12
HSPG2-213ENST00000498495 FOXD4L1Q9NU39 408 aa14.31□□□□□ -0.12
HSPG2-213ENST00000498495 SUCLA2Q9P2R7 463 aaPredicted RBP14.31□□□□□ -0.12
HSPG2-213ENST00000498495 INSL6Q9Y581 213 aa14.31□□□□□ -0.12
HSPG2-213ENST00000498495 VPS37CA5D8V6 355 aaPredicted RBP14.3□□□□□ -0.12
HSPG2-213ENST00000498495 XRCC6P12956 609 aaKnown RBP eCLIP14.3□□□□□ -0.12
HSPG2-213ENST00000498495 EIF4BP23588 611 aaKnown RBP14.3□□□□□ -0.12
HSPG2-213ENST00000498495 RFC5P40937 340 aa14.3□□□□□ -0.12
HSPG2-213ENST00000498495 GPC3P51654 580 aa14.3□□□□□ -0.12
HSPG2-213ENST00000498495 DRP2Q13474 957 aa14.3□□□□□ -0.12
HSPG2-213ENST00000498495 PDIA5Q14554 519 aa14.3□□□□□ -0.12
HSPG2-213ENST00000498495 DTHD1Q6ZMT9 781 aa14.3□□□□□ -0.12
HSPG2-213ENST00000498495 RTN4RL1Q86UN2 441 aaPredicted RBP14.3□□□□□ -0.12
HSPG2-213ENST00000498495 CATSPER3Q86XQ3 398 aa14.3□□□□□ -0.12
HSPG2-213ENST00000498495 ZNF579Q8NAF0 562 aaKnown RBP14.3□□□□□ -0.12
HSPG2-213ENST00000498495 TMEM40Q8WWA1 233 aa14.3□□□□□ -0.12
HSPG2-213ENST00000498495 NLRP7Q8WX94 980 aa14.3□□□□□ -0.12
HSPG2-213ENST00000498495 ZNF668Q96K58 619 aaPredicted RBP14.3□□□□□ -0.12
HSPG2-213ENST00000498495 CCDC43Q96MW1 224 aaKnown RBP14.3□□□□□ -0.12
HSPG2-213ENST00000498495 RAB34Q9BZG1 259 aa14.3□□□□□ -0.12
HSPG2-213ENST00000498495 ADAMTS10Q9H324 1103 aa14.3□□□□□ -0.12
HSPG2-213ENST00000498495 TUFT1Q9NNX1 390 aa14.3□□□□□ -0.12
HSPG2-213ENST00000498495 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.3□□□□□ -0.12
HSPG2-213ENST00000498495 ANKEF1Q9NU02 776 aa14.3□□□□□ -0.12
HSPG2-213ENST00000498495 LRWD1Q9UFC0 647 aa14.3□□□□□ -0.12
HSPG2-213ENST00000498495 ST3GAL5Q9UNP4 418 aa14.3□□□□□ -0.12
HSPG2-213ENST00000498495 STXBP5LQ9Y2K9 1186 aa14.3□□□□□ -0.12
HSPG2-213ENST00000498495 A0A087WWV3 80 aa14.29□□□□□ -0.12
HSPG2-213ENST00000498495 SPATA31C1P0DKV0 1188 aa14.29□□□□□ -0.12
HSPG2-213ENST00000498495 FXR2P51116 673 aaKnown RBP eCLIP14.29□□□□□ -0.123e-6■■■■□ 23.4
HSPG2-213ENST00000498495 RHPN2Q8IUC4 686 aa14.29□□□□□ -0.12
HSPG2-213ENST00000498495 HSCBQ8IWL3 235 aa14.29□□□□□ -0.12
HSPG2-213ENST00000498495 PIGOQ8TEQ8 1089 aa14.29□□□□□ -0.12
HSPG2-213ENST00000498495 MYLIPQ8WY64 445 aa14.29□□□□□ -0.12
HSPG2-213ENST00000498495 NACC1Q96RE7 527 aa14.29□□□□□ -0.12
HSPG2-213ENST00000498495 YME1L1Q96TA2 773 aa14.29□□□□□ -0.12
HSPG2-213ENST00000498495 POLR3CQ9BUI4 534 aaPredicted RBP14.29□□□□□ -0.12
HSPG2-213ENST00000498495 GCOM2Q9BZD3 368 aaPredicted RBP14.29□□□□□ -0.12
HSPG2-213ENST00000498495 DHX33Q9H6R0 707 aaKnown RBP14.29□□□□□ -0.12
HSPG2-213ENST00000498495 ERVK-5Q9HDB9 667 aa14.29□□□□□ -0.12
HSPG2-213ENST00000498495 STK24Q9Y6E0 443 aa14.29□□□□□ -0.12
HSPG2-213ENST00000498495 LAMA3Q16787 3333 aa14.29□□□□□ -0.12
HSPG2-213ENST00000498495 DENND3A2RUS2 1198 aa14.28□□□□□ -0.12
HSPG2-213ENST00000498495 LCHNA4D1U4 455 aa14.28□□□□□ -0.12
HSPG2-213ENST00000498495 MED24O75448 989 aa14.28□□□□□ -0.12
HSPG2-213ENST00000498495 ZSCAN20P17040 1043 aaPredicted RBP14.28□□□□□ -0.12
HSPG2-213ENST00000498495 SYT1P21579 422 aa14.28□□□□□ -0.12
HSPG2-213ENST00000498495 RPA1P27694 616 aa14.28□□□□□ -0.12
HSPG2-213ENST00000498495 PRPHP41219 470 aa14.28□□□□□ -0.12
HSPG2-213ENST00000498495 HTRA4P83105 476 aaPredicted RBP14.28□□□□□ -0.12
HSPG2-213ENST00000498495 TAP1Q03518 808 aa14.28□□□□□ -0.12
HSPG2-213ENST00000498495 HAUS3Q68CZ6 603 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms