RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 IGF2BP3O00425 579 aaKnown RBP eCLIP19.6■□□□□ 0.73
CHRNA4-206ENST00000498043 CLIC2O15247 247 aa19.6■□□□□ 0.73
CHRNA4-206ENST00000498043 TGFB1I1O43294 461 aa19.6■□□□□ 0.73
CHRNA4-206ENST00000498043 KLK7P49862 253 aa19.6■□□□□ 0.73
CHRNA4-206ENST00000498043 SOX10P56693 466 aa19.6■□□□□ 0.73
CHRNA4-206ENST00000498043 TRIM14Q14142 442 aa19.6■□□□□ 0.73
CHRNA4-206ENST00000498043 SYCP1Q15431 976 aa19.6■□□□□ 0.73
CHRNA4-206ENST00000498043 ZNF792Q3KQV3 632 aa19.6■□□□□ 0.73
CHRNA4-206ENST00000498043 MTERF2Q49AM1 385 aa19.6■□□□□ 0.73
CHRNA4-206ENST00000498043 FKBP15Q5T1M5 1219 aa19.6■□□□□ 0.73
CHRNA4-206ENST00000498043 SAPCD2Q86UD0 394 aa19.6■□□□□ 0.73
CHRNA4-206ENST00000498043 MORC4Q8TE76 937 aa19.6■□□□□ 0.73
CHRNA4-206ENST00000498043 TMX1Q9H3N1 280 aa19.6■□□□□ 0.73
CHRNA4-206ENST00000498043 CYP26B1Q9NR63 512 aa19.6■□□□□ 0.73
CHRNA4-206ENST00000498043 MAFBQ9Y5Q3 323 aaPredicted RBP19.6■□□□□ 0.73
CHRNA4-206ENST00000498043 PPP1R37O75864 691 aa19.59■□□□□ 0.73
CHRNA4-206ENST00000498043 GNA14O95837 355 aa19.59■□□□□ 0.73
CHRNA4-206ENST00000498043 ATP4AP20648 1035 aa19.59■□□□□ 0.73
CHRNA4-206ENST00000498043 XKR3Q5GH77 459 aa19.59■□□□□ 0.73
CHRNA4-206ENST00000498043 GPR142Q7Z601 462 aa19.59■□□□□ 0.73
CHRNA4-206ENST00000498043 BAG1Q99933 345 aaPredicted RBP19.59■□□□□ 0.73
CHRNA4-206ENST00000498043 PDGFCQ9NRA1 345 aa19.59■□□□□ 0.73
CHRNA4-206ENST00000498043 PCDHB13Q9Y5F0 798 aa19.59■□□□□ 0.73
CHRNA4-206ENST00000498043 USP27XA6NNY8 438 aa19.58■□□□□ 0.73
CHRNA4-206ENST00000498043 ECM2O94769 699 aaPredicted RBP19.58■□□□□ 0.73
CHRNA4-206ENST00000498043 OATP04181 439 aa19.58■□□□□ 0.73
CHRNA4-206ENST00000498043 TCF7P36402 384 aaPredicted RBP19.58■□□□□ 0.73
CHRNA4-206ENST00000498043 PEX3P56589 373 aa19.58■□□□□ 0.73
CHRNA4-206ENST00000498043 KCNV1Q6PIU1 500 aa19.58■□□□□ 0.73
CHRNA4-206ENST00000498043 CNGA4Q8IV77 575 aa19.58■□□□□ 0.73
CHRNA4-206ENST00000498043 PCMTD1Q96MG8 357 aaPredicted RBP19.58■□□□□ 0.73
CHRNA4-206ENST00000498043 PCYT2Q99447 389 aa19.58■□□□□ 0.73
CHRNA4-206ENST00000498043 CPA4Q9UI42 421 aa19.58■□□□□ 0.73
CHRNA4-206ENST00000498043 IGKV6D-21A0A0A0MT36 114 aa19.58■□□□□ 0.72
CHRNA4-206ENST00000498043 RNF225M0QZC1 329 aaPredicted RBP19.58■□□□□ 0.72
CHRNA4-206ENST00000498043 TMEM63BQ5T3F8 832 aa19.58■□□□□ 0.72
CHRNA4-206ENST00000498043 RGMBQ6NW40 437 aa19.58■□□□□ 0.72
CHRNA4-206ENST00000498043 ABRAQ8N0Z2 381 aa19.58■□□□□ 0.72
CHRNA4-206ENST00000498043 COPS5Q92905 334 aa19.58■□□□□ 0.72
CHRNA4-206ENST00000498043 STRA6Q9BX79 667 aa19.58■□□□□ 0.72
CHRNA4-206ENST00000498043 LOC102724159A0A0B4J2E5 919 aa19.57■□□□□ 0.72
CHRNA4-206ENST00000498043 STRNO43815 780 aa19.57■□□□□ 0.72
CHRNA4-206ENST00000498043 DGAT1O75907 488 aa19.57■□□□□ 0.72
CHRNA4-206ENST00000498043 MARSP56192 900 aaKnown RBP19.57■□□□□ 0.72
CHRNA4-206ENST00000498043 PWP2Q15269 919 aaKnown RBP19.57■□□□□ 0.72
CHRNA4-206ENST00000498043 HSDL1Q3SXM5 330 aa19.57■□□□□ 0.72
CHRNA4-206ENST00000498043 CELF3Q5SZQ8 465 aaKnown RBP19.57■□□□□ 0.72
CHRNA4-206ENST00000498043 TRIM59Q8IWR1 403 aa19.57■□□□□ 0.72
CHRNA4-206ENST00000498043 SYCP3Q8IZU3 236 aa19.57■□□□□ 0.72
CHRNA4-206ENST00000498043 PANX2Q96RD6 677 aa19.57■□□□□ 0.72
CHRNA4-206ENST00000498043 ATP6V0A4Q9HBG4 840 aa19.57■□□□□ 0.72
CHRNA4-206ENST00000498043 PASKQ96RG2 1323 aa19.57■□□□□ 0.72
CHRNA4-206ENST00000498043 MANSC4A6NHS7 340 aaPredicted RBP19.56■□□□□ 0.72
CHRNA4-206ENST00000498043 NOP56O00567 594 aaKnown RBP19.56■□□□□ 0.72
CHRNA4-206ENST00000498043 SLC16A4O15374 487 aa19.56■□□□□ 0.72
CHRNA4-206ENST00000498043 AKAP3O75969 853 aa19.56■□□□□ 0.72
CHRNA4-206ENST00000498043 TXNP10599 105 aaKnown RBP19.56■□□□□ 0.72
CHRNA4-206ENST00000498043 TRIM21P19474 475 aaKnown RBP19.56■□□□□ 0.72
CHRNA4-206ENST00000498043 RPL13P26373 211 aaKnown RBP19.56■□□□□ 0.72
CHRNA4-206ENST00000498043 CCDC62Q6P9F0 684 aa19.56■□□□□ 0.72
CHRNA4-206ENST00000498043 HS2ST1Q7LGA3 356 aa19.56■□□□□ 0.72
CHRNA4-206ENST00000498043 CCDC155Q8N6L0 562 aa19.56■□□□□ 0.72
CHRNA4-206ENST00000498043 SEPT1Q8WYJ6 367 aa19.56■□□□□ 0.72
CHRNA4-206ENST00000498043 ERGIC2Q96RQ1 377 aa19.56■□□□□ 0.72
CHRNA4-206ENST00000498043 KIFC3Q9BVG8 833 aa19.56■□□□□ 0.72
CHRNA4-206ENST00000498043 GBP3Q9H0R5 595 aa19.56■□□□□ 0.72
CHRNA4-206ENST00000498043 XPNPEP1Q9NQW7 623 aa19.56■□□□□ 0.72
CHRNA4-206ENST00000498043 ABHD10Q9NUJ1 306 aa19.56■□□□□ 0.72
CHRNA4-206ENST00000498043 TRMT1Q9NXH9 659 aaKnown RBP19.56■□□□□ 0.72
CHRNA4-206ENST00000498043 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.56■□□□□ 0.72
CHRNA4-206ENST00000498043 TTC26A0AVF1 554 aa19.56■□□□□ 0.72
CHRNA4-206ENST00000498043 MAPTP10636 758 aaKnown RBP19.56■□□□□ 0.72
CHRNA4-206ENST00000498043 CASP4P49662 377 aa19.56■□□□□ 0.72
CHRNA4-206ENST00000498043 DMP1Q13316 513 aaPredicted RBP19.56■□□□□ 0.72
CHRNA4-206ENST00000498043 GRB14Q14449 540 aa19.56■□□□□ 0.72
CHRNA4-206ENST00000498043 FAM160B1Q5W0V3 765 aa19.56■□□□□ 0.72
CHRNA4-206ENST00000498043 E4F1Q66K89 784 aaPredicted RBP19.56■□□□□ 0.72
CHRNA4-206ENST00000498043 TRIM50Q86XT4 487 aa19.56■□□□□ 0.72
CHRNA4-206ENST00000498043 DHX37Q8IY37 1157 aaKnown RBP19.56■□□□□ 0.72
CHRNA4-206ENST00000498043 BSNDQ8WZ55 320 aa19.56■□□□□ 0.72
CHRNA4-206ENST00000498043 GPR20Q99678 358 aa19.56■□□□□ 0.72
CHRNA4-206ENST00000498043 AGPAT3Q9NRZ7 376 aa19.56■□□□□ 0.72
CHRNA4-206ENST00000498043 CCDC169A6NNP5 214 aa19.55■□□□□ 0.72
CHRNA4-206ENST00000498043 STAT5BP51692 787 aa19.55■□□□□ 0.72
CHRNA4-206ENST00000498043 POLGP54098 1239 aaPredicted RBP19.55■□□□□ 0.72
CHRNA4-206ENST00000498043 NCKAP1LP55160 1127 aa19.55■□□□□ 0.72
CHRNA4-206ENST00000498043 ALCAMQ13740 583 aa19.55■□□□□ 0.72
CHRNA4-206ENST00000498043 TTLL4Q14679 1199 aa19.55■□□□□ 0.72
CHRNA4-206ENST00000498043 EMC2Q15006 297 aa19.55■□□□□ 0.72
CHRNA4-206ENST00000498043 TAF1CQ15572 869 aaPredicted RBP19.55■□□□□ 0.72
CHRNA4-206ENST00000498043 HAUS6Q7Z4H7 955 aa19.55■□□□□ 0.72
CHRNA4-206ENST00000498043 PLEKHH3Q7Z736 793 aa19.55■□□□□ 0.72
CHRNA4-206ENST00000498043 DPP9Q86TI2 863 aa19.55■□□□□ 0.72
CHRNA4-206ENST00000498043 MCPH1Q8NEM0 835 aa19.55■□□□□ 0.72
CHRNA4-206ENST00000498043 SCFD2Q8WU76 684 aa19.55■□□□□ 0.72
CHRNA4-206ENST00000498043 KIFAP3Q92845 792 aa19.55■□□□□ 0.72
CHRNA4-206ENST00000498043 SPATA33Q96N06 139 aa19.55■□□□□ 0.72
CHRNA4-206ENST00000498043 ARMCX3Q9UH62 379 aaPredicted RBP19.55■□□□□ 0.72
CHRNA4-206ENST00000498043 ZNF236Q9UL36 1845 aa19.55■□□□□ 0.72
CHRNA4-206ENST00000498043 ADGRA2Q96PE1 1338 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms