RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 RSPH1Q8WYR4 309 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 TTC9Q92623 222 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 GOLGA1Q92805 767 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 TNFRSF25Q93038 417 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 SECISBP2LQ93073 1101 aaKnown RBP2.25□□□□□ -2.05
UBR4-217ENST00000497018 WNT8BQ93098 351 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 COA7Q96BR5 231 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 ABHD17AQ96GS6 310 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 SNX27Q96L92 541 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 ACAP3Q96P50 834 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 RMDN3Q96TC7 470 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 SEC62Q99442 399 aaKnown RBP2.25□□□□□ -2.05
UBR4-217ENST00000497018 BARD1Q99728 777 aaKnown RBP2.25□□□□□ -2.05
UBR4-217ENST00000497018 COLEC11Q9BWP8 271 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 BOCQ9BWV1 1114 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 AP1M1Q9BXS5 423 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 SLC26A6Q9BXS9 759 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 MKRN2Q9H000 416 aaKnown RBP2.25□□□□□ -2.05
UBR4-217ENST00000497018 SMG9Q9H0W8 520 aaKnown RBP2.25□□□□□ -2.05
UBR4-217ENST00000497018 MAGEH1Q9H213 219 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 CDIP1Q9H305 208 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 TRIT1Q9H3H1 467 aaKnown RBP2.25□□□□□ -2.05
UBR4-217ENST00000497018 IGFLR1Q9H665 355 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 NOL6Q9H6R4 1146 aaKnown RBP2.25□□□□□ -2.05
UBR4-217ENST00000497018 CNTD2Q9H8S5 307 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 SMURF1Q9HCE7 757 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 STARD7Q9NQZ5 370 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 FRRS1LQ9P0K9 344 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 IFT80Q9P2H3 777 aaPredicted RBP2.25□□□□□ -2.05
UBR4-217ENST00000497018 CCDC39Q9UFE4 941 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 ZNF112Q9UJU3 913 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 DNMT3LQ9UJW3 386 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 ATXN7L1Q9ULK2 861 aaPredicted RBP2.25□□□□□ -2.05
UBR4-217ENST00000497018 CBLCQ9ULV8 474 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 SLC6A14Q9UN76 642 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 GPR55Q9Y2T6 319 aaPredicted RBP2.25□□□□□ -2.05
UBR4-217ENST00000497018 AFG3L2Q9Y4W6 797 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 PCDHGB2Q9Y5G2 931 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 PCDHA11Q9Y5I1 949 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 ST14Q9Y5Y6 855 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 CSADQ9Y600 493 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 CNTLNQ9NXG0 1405 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 ITSN2Q9NZM3 1697 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 DNMT1P26358 1616 aaKnown RBP2.24□□□□□ -2.05
UBR4-217ENST00000497018 HECW1Q76N89 1606 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 ABCA10Q8WWZ4 1543 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 LOC100289279A0A1B0GTE1 492 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 A0A1W2PPC4 97 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 RHPN2P1A8MT19 583 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 F5H0A9 414 aaPredicted RBP2.24□□□□□ -2.05
UBR4-217ENST00000497018 SYT5O00445 386 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 ACKR2O00590 384 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 SIN3BO75182 1162 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 FGF18O76093 207 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 MTA2O94776 668 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 INMTO95050 263 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 DLGAP3O95886 979 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 CKMT1AP12532 417 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 MYF5P13349 255 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 OSMP13725 252 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 LCP1P13796 627 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 CPB1P15086 417 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 ITGA6P23229 1130 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 GBP1P32455 592 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 LSP1P33241 339 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 LTBRP36941 435 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 TECP42680 631 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 IL12RB1P42701 662 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 ARL4CP56559 192 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 RNF4P78317 190 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 AMPD2Q01433 879 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 KIF23Q02241 960 aaPredicted RBP2.24□□□□□ -2.05
UBR4-217ENST00000497018 CACNB2Q08289 660 aaPredicted RBP2.24□□□□□ -2.05
UBR4-217ENST00000497018 C19orf57Q0VDD7 668 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 KCNAB2Q13303 367 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 PDE3AQ14432 1141 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 CLUL1Q15846 466 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 GPR162Q16538 588 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 FSCN1Q16658 493 aaKnown RBP2.24□□□□□ -2.05
UBR4-217ENST00000497018 SLC35G1Q2M3R5 365 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 ANO4Q32M45 955 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 PGS1Q32NB8 556 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 NBPF9Q3BBW0 867 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 CCDC92Q53HC0 331 aaPredicted RBP2.24□□□□□ -2.05
UBR4-217ENST00000497018 SLC45A4Q5BKX6 768 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 LIN54Q6MZP7 749 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 HIBCHQ6NVY1 386 aaPredicted RBP2.24□□□□□ -2.05
UBR4-217ENST00000497018 JMJD6Q6NYC1 403 aaPredicted RBP2.24□□□□□ -2.05
UBR4-217ENST00000497018 HHIPL2Q6UWX4 724 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 C4orf50Q6ZRC1 276 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 C16orf59Q7L2K0 433 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 MAEAQ7L5Y9 396 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 FAM35AQ86V20 835 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 NOSTRINQ8IVI9 506 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 CPOQ8IVL8 374 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 THEMISQ8N1K5 641 aaPredicted RBP2.24□□□□□ -2.05
UBR4-217ENST00000497018 ESX1Q8N693 406 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 RNF214Q8ND24 703 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 PLBD2Q8NHP8 589 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 DCAF11Q8TEB1 546 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms