RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 PCDHA5Q9Y5H7 936 aa20.29■□□□□ 0.84
RGP1-202ENST00000496906 NRCAMQ92823 1304 aa20.29■□□□□ 0.84
RGP1-202ENST00000496906 MAFO75444 373 aaPredicted RBP20.29■□□□□ 0.84
RGP1-202ENST00000496906 KRT18P05783 430 aaKnown RBP20.29■□□□□ 0.84
RGP1-202ENST00000496906 IGBP1P78318 339 aa20.29■□□□□ 0.84
RGP1-202ENST00000496906 CACNB1Q02641 598 aaPredicted RBP20.29■□□□□ 0.84
RGP1-202ENST00000496906 TBC1D8BQ0IIM8 1120 aa20.29■□□□□ 0.84
RGP1-202ENST00000496906 EMC2Q15006 297 aa20.29■□□□□ 0.84
RGP1-202ENST00000496906 NT5DC1Q5TFE4 455 aa20.29■□□□□ 0.84
RGP1-202ENST00000496906 PPP1R13LQ8WUF5 828 aa20.29■□□□□ 0.84
RGP1-202ENST00000496906 SLC7A3Q8WY07 619 aa20.29■□□□□ 0.84
RGP1-202ENST00000496906 TIPINQ9BVW5 301 aa20.29■□□□□ 0.84
RGP1-202ENST00000496906 ATP6V0A4Q9HBG4 840 aa20.29■□□□□ 0.84
RGP1-202ENST00000496906 TUBE1Q9UJT0 475 aa20.29■□□□□ 0.84
RGP1-202ENST00000496906 A0A1W2PQ45 241 aaPredicted RBP20.28■□□□□ 0.84
RGP1-202ENST00000496906 A0A1W2PQY0 241 aa20.28■□□□□ 0.84
RGP1-202ENST00000496906 RRN3P2A6NIE6 340 aa20.28■□□□□ 0.84
RGP1-202ENST00000496906 KLRC4O43908 158 aa20.28■□□□□ 0.84
RGP1-202ENST00000496906 SMC2O95347 1197 aa20.28■□□□□ 0.84
RGP1-202ENST00000496906 C22orf31O95567 290 aa20.28■□□□□ 0.84
RGP1-202ENST00000496906 HOXC8P31273 242 aa20.28■□□□□ 0.84
RGP1-202ENST00000496906 GJA8P48165 433 aa20.28■□□□□ 0.84
RGP1-202ENST00000496906 SARSP49591 514 aaKnown RBP20.28■□□□□ 0.84
RGP1-202ENST00000496906 NBPF20Q3BBV1 942 aa20.28■□□□□ 0.84
RGP1-202ENST00000496906 MCPH1Q8NEM0 835 aa20.28■□□□□ 0.84
RGP1-202ENST00000496906 LMBR1Q8WVP7 490 aa20.28■□□□□ 0.84
RGP1-202ENST00000496906 SMARCE1Q969G3 411 aa20.28■□□□□ 0.84
RGP1-202ENST00000496906 GLT1D1Q96MS3 346 aa20.28■□□□□ 0.84
RGP1-202ENST00000496906 SETD4Q9NVD3 440 aa20.28■□□□□ 0.84
RGP1-202ENST00000496906 HDAC6Q9UBN7 1215 aa20.28■□□□□ 0.84
RGP1-202ENST00000496906 ODF2LQ9ULJ1 636 aa20.28■□□□□ 0.84
RGP1-202ENST00000496906 IGKV6-21A0A0C4DH24 114 aa20.27■□□□□ 0.84
RGP1-202ENST00000496906 FRMD3A2A2Y4 597 aa20.27■□□□□ 0.84
RGP1-202ENST00000496906 RSPH10B2B2RC85 870 aa20.27■□□□□ 0.84
RGP1-202ENST00000496906 RPN1P04843 607 aaKnown RBP20.27■□□□□ 0.84
RGP1-202ENST00000496906 RSPH10BP0C881 870 aa20.27■□□□□ 0.84
RGP1-202ENST00000496906 ADAM17P78536 824 aa20.27■□□□□ 0.84
RGP1-202ENST00000496906 MAPK7Q13164 816 aa20.27■□□□□ 0.84
RGP1-202ENST00000496906 MARCH8Q5T0T0 291 aa20.27■□□□□ 0.84
RGP1-202ENST00000496906 UNC13DQ70J99 1090 aa20.27■□□□□ 0.84
RGP1-202ENST00000496906 MAEAQ7L5Y9 396 aa20.27■□□□□ 0.84
RGP1-202ENST00000496906 EXOC8Q8IYI6 725 aa20.27■□□□□ 0.84
RGP1-202ENST00000496906 DAW1Q8N136 415 aa20.27■□□□□ 0.84
RGP1-202ENST00000496906 C7orf31Q8N865 590 aa20.27■□□□□ 0.84
RGP1-202ENST00000496906 GRIN2DO15399 1336 aa20.27■□□□□ 0.84
RGP1-202ENST00000496906 PVALEFA0A1B0GWK0 134 aa20.26■□□□□ 0.83
RGP1-202ENST00000496906 HIP1RO75146 1068 aa20.26■□□□□ 0.83
RGP1-202ENST00000496906 IDEP14735 1019 aa20.26■□□□□ 0.83
RGP1-202ENST00000496906 HIC1Q14526 733 aa20.26■□□□□ 0.83
RGP1-202ENST00000496906 ZSCAN23Q3MJ62 389 aa20.26■□□□□ 0.83
RGP1-202ENST00000496906 SESTD1Q86VW0 696 aa20.26■□□□□ 0.83
RGP1-202ENST00000496906 GSDMAQ96QA5 445 aa20.26■□□□□ 0.83
RGP1-202ENST00000496906 JPH2Q9BR39 696 aaPredicted RBP20.26■□□□□ 0.83
RGP1-202ENST00000496906 POLD4Q9HCU8 107 aa20.26■□□□□ 0.83
RGP1-202ENST00000496906 GPRC5CQ9NQ84 441 aa20.26■□□□□ 0.83
RGP1-202ENST00000496906 GTF2IRD1Q9UHL9 959 aa20.26■□□□□ 0.83
RGP1-202ENST00000496906 C17orf102A2RUQ5 167 aa20.25■□□□□ 0.83
RGP1-202ENST00000496906 MAGEB2O15479 319 aa20.25■□□□□ 0.83
RGP1-202ENST00000496906 GAS2O43903 313 aaKnown RBP20.25■□□□□ 0.83
RGP1-202ENST00000496906 TBCAO75347 108 aaKnown RBP20.25■□□□□ 0.83
RGP1-202ENST00000496906 LETM1O95202 739 aaPredicted RBP20.25■□□□□ 0.83
RGP1-202ENST00000496906 TFRCP02786 760 aaKnown RBP20.25■□□□□ 0.83
RGP1-202ENST00000496906 KLRC1P26715 233 aa20.25■□□□□ 0.83
RGP1-202ENST00000496906 MNX1P50219 401 aaPredicted RBP20.25■□□□□ 0.83
RGP1-202ENST00000496906 ZNF131P52739 623 aa20.25■□□□□ 0.83
RGP1-202ENST00000496906 SOX10P56693 466 aa20.25■□□□□ 0.83
RGP1-202ENST00000496906 KMT5BQ4FZB7 885 aa20.25■□□□□ 0.83
RGP1-202ENST00000496906 FAM102BQ5T8I3 360 aa20.25■□□□□ 0.83
RGP1-202ENST00000496906 NFRKBQ6P4R8 1299 aa20.25■□□□□ 0.83
RGP1-202ENST00000496906 MTHFD1LQ6UB35 978 aa20.25■□□□□ 0.83
RGP1-202ENST00000496906 CCDC65Q8IXS2 484 aa20.25■□□□□ 0.83
RGP1-202ENST00000496906 ZBTB10Q96DT7 871 aa20.25■□□□□ 0.83
RGP1-202ENST00000496906 STARD7Q9NQZ5 370 aa20.25■□□□□ 0.83
RGP1-202ENST00000496906 PANK4Q9NVE7 773 aa20.25■□□□□ 0.83
RGP1-202ENST00000496906 MBLAC1A4D2B0 266 aaPredicted RBP20.25■□□□□ 0.83
RGP1-202ENST00000496906 FAM13AO94988 1023 aa20.25■□□□□ 0.83
RGP1-202ENST00000496906 EHHADHQ08426 723 aa20.25■□□□□ 0.83
RGP1-202ENST00000496906 COASYQ13057 564 aa20.25■□□□□ 0.83
RGP1-202ENST00000496906 ITGA7Q13683 1181 aa20.25■□□□□ 0.83
RGP1-202ENST00000496906 KCNB1Q14721 858 aa20.25■□□□□ 0.83
RGP1-202ENST00000496906 LINC01465Q8N7H1 131 aa20.25■□□□□ 0.83
RGP1-202ENST00000496906 VTI1AQ96AJ9 217 aa20.25■□□□□ 0.83
RGP1-202ENST00000496906 DRC1Q96MC2 740 aa20.25■□□□□ 0.83
RGP1-202ENST00000496906 TMEM106CQ9BVX2 250 aa20.25■□□□□ 0.83
RGP1-202ENST00000496906 GZF1Q9H116 711 aaPredicted RBP20.25■□□□□ 0.83
RGP1-202ENST00000496906 MAN1B1Q9UKM7 699 aa20.25■□□□□ 0.83
RGP1-202ENST00000496906 COL4A3BPQ9Y5P4 624 aa20.25■□□□□ 0.83
RGP1-202ENST00000496906 SYCE3A1L190 88 aa20.24■□□□□ 0.83
RGP1-202ENST00000496906 RHOBTB3O94955 611 aa20.24■□□□□ 0.83
RGP1-202ENST00000496906 GNAT1P11488 350 aa20.24■□□□□ 0.83
RGP1-202ENST00000496906 MKRN4PQ13434 485 aaPredicted RBP20.24■□□□□ 0.83
RGP1-202ENST00000496906 DRP2Q13474 957 aa20.24■□□□□ 0.83
RGP1-202ENST00000496906 EFCAB12Q6NXP0 572 aa20.24■□□□□ 0.83
RGP1-202ENST00000496906 LRRC71Q8N4P6 559 aa20.24■□□□□ 0.83
RGP1-202ENST00000496906 RETREG2Q8NC44 543 aa20.24■□□□□ 0.83
RGP1-202ENST00000496906 KIFAP3Q92845 792 aa20.24■□□□□ 0.83
RGP1-202ENST00000496906 TMEM143Q96AN5 459 aa20.24■□□□□ 0.83
RGP1-202ENST00000496906 POLR3FQ9H1D9 316 aaPredicted RBP20.24■□□□□ 0.83
RGP1-202ENST00000496906 PARVGQ9HBI0 331 aa20.24■□□□□ 0.83
RGP1-202ENST00000496906 EXOC1Q9NV70 894 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms