RNA–Protein interactions for RNA: ENST00000496809.5

VPS72-206, Transcript of vacuolar protein sorting 72 homolog, human

TSL 5

Gene VPS72, Length 913 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS72-206	ENST00000496809	SLC5A5	Q92911	643 aa		13.98	□□□□□ -0.17
VPS72-206	ENST00000496809	LENG9	Q96B70	501 aa		13.98	□□□□□ -0.17
VPS72-206	ENST00000496809	ELAC1	Q9H777	363 aa	Known RBP	13.98	□□□□□ -0.17
VPS72-206	ENST00000496809	CDHR5	Q9HBB8	845 aa		13.98	□□□□□ -0.17
VPS72-206	ENST00000496809	ATP6V0A4	Q9HBG4	840 aa		13.98	□□□□□ -0.17
VPS72-206	ENST00000496809	ALG13	Q9NP73	1137 aa	Known RBP	13.98	□□□□□ -0.17
VPS72-206	ENST00000496809	PDRG1	Q9NUG6	133 aa		13.98	□□□□□ -0.17
VPS72-206	ENST00000496809	AKT3	Q9Y243	479 aa		13.98	□□□□□ -0.17
VPS72-206	ENST00000496809	REV3L	O60673	3130 aa		13.97	□□□□□ -0.17
VPS72-206	ENST00000496809	CYP3A7-CYP3A51P	A0A087WV96	503 aa		13.97	□□□□□ -0.17
VPS72-206	ENST00000496809		C9IYK1	514 aa		13.97	□□□□□ -0.17
VPS72-206	ENST00000496809	PI4K2B	G5E9Z4	385 aa		13.97	□□□□□ -0.17
VPS72-206	ENST00000496809	ADAMTS3	O15072	1205 aa		13.97	□□□□□ -0.17
VPS72-206	ENST00000496809	GPR32	O75388	356 aa		13.97	□□□□□ -0.17
VPS72-206	ENST00000496809	ALAD	P13716	330 aa		13.97	□□□□□ -0.17
VPS72-206	ENST00000496809	CYP3A7	P24462	503 aa		13.97	□□□□□ -0.17
VPS72-206	ENST00000496809	DNM2	P50570	870 aa		13.97	□□□□□ -0.17
VPS72-206	ENST00000496809	UBE3A	Q05086	875 aa		13.97	□□□□□ -0.17
VPS72-206	ENST00000496809	TBC1D8B	Q0IIM8	1120 aa		13.97	□□□□□ -0.17
VPS72-206	ENST00000496809	CTC1	Q2NKJ3	1217 aa		13.97	□□□□□ -0.17
VPS72-206	ENST00000496809		Q4G0T1	1027 aa		13.97	□□□□□ -0.17
VPS72-206	ENST00000496809	KLHL23	Q8NBE8	558 aa		13.97	□□□□□ -0.17
VPS72-206	ENST00000496809	DAGLB	Q8NCG7	672 aa		13.97	□□□□□ -0.17
VPS72-206	ENST00000496809	SPPL3	Q8TCT6	385 aa		13.97	□□□□□ -0.17
VPS72-206	ENST00000496809	TMEM40	Q8WWA1	233 aa		13.97	□□□□□ -0.17
VPS72-206	ENST00000496809	OSMR	Q99650	979 aa		13.97	□□□□□ -0.17
VPS72-206	ENST00000496809	EPHX3	Q9H6B9	360 aa		13.97	□□□□□ -0.17
VPS72-206	ENST00000496809	TMEM161A	Q9NX61	479 aa		13.97	□□□□□ -0.17
VPS72-206	ENST00000496809	CHMP2A	O43633	222 aa		13.96	□□□□□ -0.17
VPS72-206	ENST00000496809	EIF5B	O60841	1220 aa	Known RBP	13.96	□□□□□ -0.17
VPS72-206	ENST00000496809	GPR37L1	O60883	481 aa		13.96	□□□□□ -0.17
VPS72-206	ENST00000496809	VTN	P04004	478 aa		13.96	□□□□□ -0.17
VPS72-206	ENST00000496809	ITGB1	P05556	798 aa		13.96	□□□□□ -0.17
VPS72-206	ENST00000496809	IL9	P15248	144 aa		13.96	□□□□□ -0.17
VPS72-206	ENST00000496809	EIF4B	P23588	611 aa	Known RBP	13.96	□□□□□ -0.17
VPS72-206	ENST00000496809	NLRP11	P59045	1033 aa	Known RBP	13.96	□□□□□ -0.17
VPS72-206	ENST00000496809	FAM189B	P81408	668 aa		13.96	□□□□□ -0.17
VPS72-206	ENST00000496809	PRKCE	Q02156	737 aa		13.96	□□□□□ -0.17
VPS72-206	ENST00000496809	HYAL1	Q12794	435 aa		13.96	□□□□□ -0.17
VPS72-206	ENST00000496809	NONO	Q15233	471 aa	Known RBP eCLIP	13.96	□□□□□ -0.17
VPS72-206	ENST00000496809	PDE12	Q6L8Q7	609 aa	Known RBP	13.96	□□□□□ -0.17
VPS72-206	ENST00000496809	MIER3	Q7Z3K6	550 aa		13.96	□□□□□ -0.17
VPS72-206	ENST00000496809	KRT25	Q7Z3Z0	450 aa		13.96	□□□□□ -0.17
VPS72-206	ENST00000496809	SCLT1	Q96NL6	688 aa		13.96	□□□□□ -0.17
VPS72-206	ENST00000496809	POP1	Q99575	1024 aa	Known RBP	13.96	□□□□□ -0.17
VPS72-206	ENST00000496809	UPF3B	Q9BZI7	483 aa	Known RBP	13.96	□□□□□ -0.17
VPS72-206	ENST00000496809	TBKBP1	A7MCY6	615 aa		13.95	□□□□□ -0.18
VPS72-206	ENST00000496809	ZNF862	O60290	1169 aa		13.95	□□□□□ -0.18
VPS72-206	ENST00000496809	MGEA5	O60502	916 aa		13.95	□□□□□ -0.18
VPS72-206	ENST00000496809	DKC1	O60832	514 aa	Known RBP eCLIP	13.95	□□□□□ -0.18
VPS72-206	ENST00000496809	PSMD10	O75832	226 aa		13.95	□□□□□ -0.18
VPS72-206	ENST00000496809	IBSP	P21815	317 aa	Predicted RBP	13.95	□□□□□ -0.18
VPS72-206	ENST00000496809	CLCN3	P51790	818 aa		13.95	□□□□□ -0.18
VPS72-206	ENST00000496809	ADAM15	Q13444	863 aa		13.95	□□□□□ -0.18
VPS72-206	ENST00000496809	XKR3	Q5GH77	459 aa		13.95	□□□□□ -0.18
VPS72-206	ENST00000496809	FAM228A	Q86W67	206 aa		13.95	□□□□□ -0.18
VPS72-206	ENST00000496809	ABI1	Q8IZP0	508 aa		13.95	□□□□□ -0.18
VPS72-206	ENST00000496809	MICAL1	Q8TDZ2	1067 aa		13.95	□□□□□ -0.18
VPS72-206	ENST00000496809	POF1B	Q8WVV4	589 aa		13.95	□□□□□ -0.18
VPS72-206	ENST00000496809	PPP1R16B	Q96T49	567 aa		13.95	□□□□□ -0.18
VPS72-206	ENST00000496809	NAP1L4	Q99733	375 aa	Known RBP	13.95	□□□□□ -0.18
VPS72-206	ENST00000496809	UNC45A	Q9H3U1	944 aa		13.95	□□□□□ -0.18
VPS72-206	ENST00000496809	IGFLR1	Q9H665	355 aa		13.95	□□□□□ -0.18
VPS72-206	ENST00000496809	DACT1	Q9NYF0	836 aa		13.95	□□□□□ -0.18
VPS72-206	ENST00000496809	PUF60	Q9UHX1	559 aa	Known RBP	13.95	□□□□□ -0.18
VPS72-206	ENST00000496809	HCN4	Q9Y3Q4	1203 aa		13.95	□□□□□ -0.18
VPS72-206	ENST00000496809	ARIH1	Q9Y4X5	557 aa	Predicted RBP	13.95	□□□□□ -0.18
VPS72-206	ENST00000496809	CCDC194	A0A1B0GVG4	234 aa		13.94	□□□□□ -0.18
VPS72-206	ENST00000496809	XIRP2	A4UGR9	3374 aa		13.94	□□□□□ -0.18
VPS72-206	ENST00000496809	LAG3	P18627	525 aa		13.94	□□□□□ -0.18
VPS72-206	ENST00000496809	LTBR	P36941	435 aa		13.94	□□□□□ -0.18
VPS72-206	ENST00000496809	NDUFV1	P49821	464 aa		13.94	□□□□□ -0.18
VPS72-206	ENST00000496809	STK3	Q13188	491 aa		13.94	□□□□□ -0.18
VPS72-206	ENST00000496809	DSC3	Q14574	896 aa		13.94	□□□□□ -0.18
VPS72-206	ENST00000496809	ANKRD1	Q15327	319 aa		13.94	□□□□□ -0.18
VPS72-206	ENST00000496809	SMAD2	Q15796	467 aa	Known RBP	13.94	□□□□□ -0.18
VPS72-206	ENST00000496809	ADHFE1	Q8IWW8	467 aa		13.94	□□□□□ -0.18
VPS72-206	ENST00000496809	EXOC8	Q8IYI6	725 aa		13.94	□□□□□ -0.18
VPS72-206	ENST00000496809	THNSL1	Q8IYQ7	743 aa		13.94	□□□□□ -0.18
VPS72-206	ENST00000496809	LINC01465	Q8N7H1	131 aa		13.94	□□□□□ -0.18
VPS72-206	ENST00000496809	EFHB	Q8N7U6	833 aa		13.94	□□□□□ -0.18
VPS72-206	ENST00000496809	RSPH1	Q8WYR4	309 aa		13.94	□□□□□ -0.18
VPS72-206	ENST00000496809	WASF1	Q92558	559 aa		13.94	□□□□□ -0.18
VPS72-206	ENST00000496809	JPH2	Q9BR39	696 aa	Predicted RBP	13.94	□□□□□ -0.18
VPS72-206	ENST00000496809	LRFN3	Q9BTN0	628 aa		13.94	□□□□□ -0.18
VPS72-206	ENST00000496809	NIFK	Q9BYG3	293 aa	Known RBP	13.94	□□□□□ -0.18
VPS72-206	ENST00000496809	INO80B	Q9C086	356 aa	Predicted RBP	13.94	□□□□□ -0.18
VPS72-206	ENST00000496809	TMEM117	Q9H0C3	514 aa		13.94	□□□□□ -0.18
VPS72-206	ENST00000496809	SLK	Q9H2G2	1235 aa	Predicted RBP	13.94	□□□□□ -0.18
VPS72-206	ENST00000496809	ADAMTS10	Q9H324	1103 aa		13.94	□□□□□ -0.18
VPS72-206	ENST00000496809	CD320	Q9NPF0	282 aa		13.94	□□□□□ -0.18
VPS72-206	ENST00000496809	DDX25	Q9UHL0	483 aa	Known RBP	13.94	□□□□□ -0.18
VPS72-206	ENST00000496809	CD207	Q9UJ71	328 aa		13.94	□□□□□ -0.18
VPS72-206	ENST00000496809	MYH9	P35579	1960 aa	Known RBP	13.93	□□□□□ -0.18
VPS72-206	ENST00000496809	CARNS1	A5YM72	827 aa		13.93	□□□□□ -0.18
VPS72-206	ENST00000496809		M0R2N6	131 aa		13.93	□□□□□ -0.18
VPS72-206	ENST00000496809	SRGAP2B	P0DMP2	458 aa		13.93	□□□□□ -0.18
VPS72-206	ENST00000496809	DARS	P14868	501 aa	Known RBP	13.93	□□□□□ -0.18
VPS72-206	ENST00000496809	GCFC2	P16383	781 aa	Known RBP	13.93	□□□□□ -0.18
VPS72-206	ENST00000496809	GATM	P50440	423 aa		13.93	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms