RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 GPR182O15218 404 aa17.68■□□□□ 0.42
HDAC4-213ENST00000496347 JAK2O60674 1132 aa17.68■□□□□ 0.42
HDAC4-213ENST00000496347 GPR32O75388 356 aa17.68■□□□□ 0.42
HDAC4-213ENST00000496347 DGKIO75912 1065 aa17.68■□□□□ 0.42
HDAC4-213ENST00000496347 MMP1P03956 469 aa17.68■□□□□ 0.42
HDAC4-213ENST00000496347 VTNP04004 478 aa17.68■□□□□ 0.42
HDAC4-213ENST00000496347 STAG3L1P0CL83 205 aa17.68■□□□□ 0.42
HDAC4-213ENST00000496347 SKIV2LQ15477 1246 aaKnown RBP17.68■□□□□ 0.42
HDAC4-213ENST00000496347 TARBP2Q15633 366 aaKnown RBP17.68■□□□□ 0.42
HDAC4-213ENST00000496347 PTPROQ16827 1216 aa17.68■□□□□ 0.42
HDAC4-213ENST00000496347 AAK1Q2M2I8 961 aa17.68■□□□□ 0.42
HDAC4-213ENST00000496347 TMEM266Q2M3C6 531 aa17.68■□□□□ 0.42
HDAC4-213ENST00000496347 FNDC1Q4ZHG4 1894 aaPredicted RBP17.68■□□□□ 0.42
HDAC4-213ENST00000496347 TIGD5Q53EQ6 642 aa17.68■□□□□ 0.42
HDAC4-213ENST00000496347 KRT40Q6A162 431 aa17.68■□□□□ 0.42
HDAC4-213ENST00000496347 TRMT1LQ7Z2T5 733 aaKnown RBP17.68■□□□□ 0.42
HDAC4-213ENST00000496347 TMEM192Q8IY95 271 aa17.68■□□□□ 0.42
HDAC4-213ENST00000496347 CMTR2Q8IYT2 770 aaKnown RBP17.68■□□□□ 0.42
HDAC4-213ENST00000496347 CRIPAKQ8N1N5 446 aa17.68■□□□□ 0.42
HDAC4-213ENST00000496347 CLP1Q92989 425 aaKnown RBP17.68■□□□□ 0.42
HDAC4-213ENST00000496347 ZNF689Q96CS4 500 aaPredicted RBP17.68■□□□□ 0.42
HDAC4-213ENST00000496347 ASB2Q96Q27 587 aa17.68■□□□□ 0.42
HDAC4-213ENST00000496347 OSMRQ99650 979 aa17.68■□□□□ 0.42
HDAC4-213ENST00000496347 NIFKQ9BYG3 293 aaKnown RBP17.68■□□□□ 0.42
HDAC4-213ENST00000496347 TMX1Q9H3N1 280 aa17.68■□□□□ 0.42
HDAC4-213ENST00000496347 C1orf112Q9NSG2 853 aa17.68■□□□□ 0.42
HDAC4-213ENST00000496347 COG5Q9UP83 839 aa17.68■□□□□ 0.42
HDAC4-213ENST00000496347 AKT3Q9Y243 479 aa17.68■□□□□ 0.42
HDAC4-213ENST00000496347 C5orf67F2Z3F1 127 aa17.67■□□□□ 0.42
HDAC4-213ENST00000496347 H3BNC9 293 aa17.67■□□□□ 0.42
HDAC4-213ENST00000496347 DKC1O60832 514 aaKnown RBP eCLIP17.67■□□□□ 0.42
HDAC4-213ENST00000496347 SARSP49591 514 aaKnown RBP17.67■□□□□ 0.42
HDAC4-213ENST00000496347 PSMC5P62195 406 aa17.67■□□□□ 0.42
HDAC4-213ENST00000496347 ST3GAL1Q11201 340 aa17.67■□□□□ 0.42
HDAC4-213ENST00000496347 NFX1Q12986 1120 aaKnown RBP17.67■□□□□ 0.42
HDAC4-213ENST00000496347 NR5A1Q13285 461 aa17.67■□□□□ 0.42
HDAC4-213ENST00000496347 EFCAB12Q6NXP0 572 aa17.67■□□□□ 0.42
HDAC4-213ENST00000496347 SLFN12Q8IYM2 578 aa17.67■□□□□ 0.42
HDAC4-213ENST00000496347 MRPL38Q96DV4 380 aaKnown RBP17.67■□□□□ 0.42
HDAC4-213ENST00000496347 LLPHQ9BRT6 129 aaKnown RBP17.67■□□□□ 0.42
HDAC4-213ENST00000496347 C11orf84Q9BUA3 381 aaPredicted RBP17.67■□□□□ 0.42
HDAC4-213ENST00000496347 NOC2LQ9Y3T9 749 aaKnown RBP17.67■□□□□ 0.42
HDAC4-213ENST00000496347 MYO7AQ13402 2215 aa17.67■□□□□ 0.42
HDAC4-213ENST00000496347 DENND3A2RUS2 1198 aa17.66■□□□□ 0.42
HDAC4-213ENST00000496347 LINC00271P0C7V0 271 aa17.66■□□□□ 0.42
HDAC4-213ENST00000496347 CTNNB1P35222 781 aa17.66■□□□□ 0.42
HDAC4-213ENST00000496347 BTG3Q14201 252 aaPredicted RBP17.66■□□□□ 0.42
HDAC4-213ENST00000496347 EARS2Q5JPH6 523 aaKnown RBP17.66■□□□□ 0.42
HDAC4-213ENST00000496347 FAM228AQ86W67 206 aa17.66■□□□□ 0.42
HDAC4-213ENST00000496347 POTEDQ86YR6 584 aa17.66■□□□□ 0.42
HDAC4-213ENST00000496347 DIS3L2Q8IYB7 885 aaKnown RBP17.66■□□□□ 0.42
HDAC4-213ENST00000496347 LRRC71Q8N4P6 559 aa17.66■□□□□ 0.42
HDAC4-213ENST00000496347 IL27Q8NEV9 243 aa17.66■□□□□ 0.42
HDAC4-213ENST00000496347 PPP1R16BQ96T49 567 aa17.66■□□□□ 0.42
HDAC4-213ENST00000496347 SH2B1Q9NRF2 756 aaPredicted RBP17.66■□□□□ 0.42
HDAC4-213ENST00000496347 ST3GAL5Q9UNP4 418 aa17.66■□□□□ 0.42
HDAC4-213ENST00000496347 PPME1Q9Y570 386 aa17.66■□□□□ 0.42
HDAC4-213ENST00000496347 DTNBO60941 627 aa17.65■□□□□ 0.42
HDAC4-213ENST00000496347 RB1P06400 928 aa17.65■□□□□ 0.42
HDAC4-213ENST00000496347 QARSP47897 775 aaKnown RBP17.65■□□□□ 0.42
HDAC4-213ENST00000496347 CDC42EP1Q00587 391 aa17.65■□□□□ 0.42
HDAC4-213ENST00000496347 SLC24A5Q71RS6 500 aa17.65■□□□□ 0.42
HDAC4-213ENST00000496347 RTN4RL1Q86UN2 441 aaPredicted RBP17.65■□□□□ 0.42
HDAC4-213ENST00000496347 BANK1Q8NDB2 785 aa17.65■□□□□ 0.42
HDAC4-213ENST00000496347 HAS1Q92839 578 aa17.65■□□□□ 0.42
HDAC4-213ENST00000496347 SCLT1Q96NL6 688 aa17.65■□□□□ 0.42
HDAC4-213ENST00000496347 CEP89Q96ST8 783 aa17.65■□□□□ 0.42
HDAC4-213ENST00000496347 JPH2Q9BR39 696 aaPredicted RBP17.65■□□□□ 0.42
HDAC4-213ENST00000496347 PLVAPQ9BX97 442 aa17.65■□□□□ 0.42
HDAC4-213ENST00000496347 ADAMTS10Q9H324 1103 aa17.65■□□□□ 0.42
HDAC4-213ENST00000496347 CDHR5Q9HBB8 845 aa17.65■□□□□ 0.42
HDAC4-213ENST00000496347 RGS18Q9NS28 235 aa17.65■□□□□ 0.42
HDAC4-213ENST00000496347 LRFN2Q9ULH4 789 aa17.65■□□□□ 0.42
HDAC4-213ENST00000496347 IGKV6-21A0A0C4DH24 114 aa17.64■□□□□ 0.41
HDAC4-213ENST00000496347 FAM205CA6NFA0 338 aa17.64■□□□□ 0.41
HDAC4-213ENST00000496347 EML1O00423 815 aa17.64■□□□□ 0.41
HDAC4-213ENST00000496347 MARCH6O60337 910 aa17.64■□□□□ 0.41
HDAC4-213ENST00000496347 MGEA5O60502 916 aa17.64■□□□□ 0.41
HDAC4-213ENST00000496347 NEMFO60524 1076 aa17.64■□□□□ 0.41
HDAC4-213ENST00000496347 STBD1O95210 358 aa17.64■□□□□ 0.41
HDAC4-213ENST00000496347 EIF4BP23588 611 aaKnown RBP17.64■□□□□ 0.41
HDAC4-213ENST00000496347 RBM25P49756 843 aaKnown RBP17.64■□□□□ 0.41
HDAC4-213ENST00000496347 GPC3P51654 580 aa17.64■□□□□ 0.41
HDAC4-213ENST00000496347 NLRP11P59045 1033 aaKnown RBP17.64■□□□□ 0.41
HDAC4-213ENST00000496347 HMGN5P82970 282 aaKnown RBP17.64■□□□□ 0.41
HDAC4-213ENST00000496347 SPIRE1Q08AE8 756 aa17.64■□□□□ 0.41
HDAC4-213ENST00000496347 GPM6BQ13491 265 aa17.64■□□□□ 0.41
HDAC4-213ENST00000496347 MTERF2Q49AM1 385 aa17.64■□□□□ 0.41
HDAC4-213ENST00000496347 ZSCAN31Q96LW9 406 aaPredicted RBP17.64■□□□□ 0.41
HDAC4-213ENST00000496347 KIF2CQ99661 725 aa17.64■□□□□ 0.41
HDAC4-213ENST00000496347 ADAM2Q99965 735 aa17.64■□□□□ 0.41
HDAC4-213ENST00000496347 LXNQ9BS40 222 aa17.64■□□□□ 0.41
HDAC4-213ENST00000496347 BTBD18B2RXH4 712 aa17.63■□□□□ 0.41
HDAC4-213ENST00000496347 C9IYK1 514 aa17.63■□□□□ 0.41
HDAC4-213ENST00000496347 BAG4O95429 457 aaKnown RBP17.63■□□□□ 0.41
HDAC4-213ENST00000496347 P4HBP07237 508 aaKnown RBP17.63■□□□□ 0.41
HDAC4-213ENST00000496347 DARSP14868 501 aaKnown RBP17.63■□□□□ 0.41
HDAC4-213ENST00000496347 BMPR1AP36894 532 aa17.63■□□□□ 0.41
HDAC4-213ENST00000496347 DNM2P50570 870 aa17.63■□□□□ 0.41
HDAC4-213ENST00000496347 SAFBQ15424 915 aaKnown RBP eCLIP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms