RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 P4HBP07237 508 aaKnown RBP12.1□□□□□ -0.47
CMSS1-208ENST00000496116 ITGB5P18084 799 aa12.1□□□□□ -0.47
CMSS1-208ENST00000496116 CCNI2Q6ZMN8 369 aaPredicted RBP12.1□□□□□ -0.47
CMSS1-208ENST00000496116 SAMD3Q8N6K7 520 aa12.1□□□□□ -0.47
CMSS1-208ENST00000496116 BANK1Q8NDB2 785 aa12.1□□□□□ -0.47
CMSS1-208ENST00000496116 FAM71BQ8TC56 605 aa12.1□□□□□ -0.47
CMSS1-208ENST00000496116 SLC16A10Q8TF71 515 aa12.1□□□□□ -0.47
CMSS1-208ENST00000496116 JDP2Q8WYK2 163 aa12.1□□□□□ -0.47
CMSS1-208ENST00000496116 BORCS6Q96GS4 357 aa12.1□□□□□ -0.47
CMSS1-208ENST00000496116 ZFP91Q96JP5 570 aaPredicted RBP12.1□□□□□ -0.47
CMSS1-208ENST00000496116 FIZ1Q96SL8 496 aa12.1□□□□□ -0.47
CMSS1-208ENST00000496116 BCAS3Q9H6U6 928 aa12.1□□□□□ -0.47
CMSS1-208ENST00000496116 KCNH7Q9NS40 1196 aa12.1□□□□□ -0.47
CMSS1-208ENST00000496116 WRAP73Q9P2S5 460 aaPredicted RBP12.1□□□□□ -0.47
CMSS1-208ENST00000496116 PNMA2Q9UL42 364 aa12.1□□□□□ -0.47
CMSS1-208ENST00000496116 ZNF536O15090 1300 aa12.1□□□□□ -0.47
CMSS1-208ENST00000496116 ATP8B3O60423 1300 aa12.1□□□□□ -0.47
CMSS1-208ENST00000496116 RPTORQ8N122 1335 aa12.1□□□□□ -0.47
CMSS1-208ENST00000496116 CCDC66A2RUB6 948 aa12.1□□□□□ -0.47
CMSS1-208ENST00000496116 LRRIQ3A6PVS8 624 aaPredicted RBP12.1□□□□□ -0.47
CMSS1-208ENST00000496116 DDX39AO00148 427 aaKnown RBP12.1□□□□□ -0.47
CMSS1-208ENST00000496116 FERP16591 822 aa12.1□□□□□ -0.47
CMSS1-208ENST00000496116 INPP5BP32019 993 aa12.1□□□□□ -0.47
CMSS1-208ENST00000496116 JAM2P57087 298 aa12.1□□□□□ -0.47
CMSS1-208ENST00000496116 GHRHRQ02643 423 aa12.1□□□□□ -0.47
CMSS1-208ENST00000496116 ALCAMQ13740 583 aa12.1□□□□□ -0.47
CMSS1-208ENST00000496116 RASA3Q14644 834 aa12.1□□□□□ -0.47
CMSS1-208ENST00000496116 PPP2R5AQ15172 486 aa12.1□□□□□ -0.47
CMSS1-208ENST00000496116 GLE1Q53GS7 698 aaKnown RBP12.1□□□□□ -0.47
CMSS1-208ENST00000496116 ZNF571Q7Z3V5 609 aaPredicted RBP12.1□□□□□ -0.47
CMSS1-208ENST00000496116 SYCP3Q8IZU3 236 aa12.1□□□□□ -0.47
CMSS1-208ENST00000496116 AGPAT3Q9NRZ7 376 aa12.1□□□□□ -0.47
CMSS1-208ENST00000496116 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.1□□□□□ -0.47
CMSS1-208ENST00000496116 LARSQ9P2J5 1176 aaKnown RBP12.1□□□□□ -0.47
CMSS1-208ENST00000496116 DAAM1Q9Y4D1 1078 aa12.1□□□□□ -0.47
CMSS1-208ENST00000496116 GRID2IPA4D2P6 1211 aa12.09□□□□□ -0.47
CMSS1-208ENST00000496116 SOCS7O14512 581 aa12.09□□□□□ -0.47
CMSS1-208ENST00000496116 HIP1RO75146 1068 aa12.09□□□□□ -0.47
CMSS1-208ENST00000496116 POLD1P28340 1107 aa12.09□□□□□ -0.47
CMSS1-208ENST00000496116 STAT1P42224 750 aa12.09□□□□□ -0.47
CMSS1-208ENST00000496116 MATR3P43243 847 aaKnown RBP eCLIP12.09□□□□□ -0.474e-7■■■■■ 27.8
CMSS1-208ENST00000496116 FMO5P49326 533 aa12.09□□□□□ -0.47
CMSS1-208ENST00000496116 MYBPC2Q14324 1141 aa12.09□□□□□ -0.47
CMSS1-208ENST00000496116 MEI1Q5TIA1 1274 aa12.09□□□□□ -0.47
CMSS1-208ENST00000496116 PCNX4Q63HM2 1172 aa12.09□□□□□ -0.47
CMSS1-208ENST00000496116 ALKBH5Q6P6C2 394 aaKnown RBP12.09□□□□□ -0.47
CMSS1-208ENST00000496116 PADI6Q6TGC4 694 aa12.09□□□□□ -0.47
CMSS1-208ENST00000496116 SLC9A9Q8IVB4 645 aa12.09□□□□□ -0.47
CMSS1-208ENST00000496116 RBM46Q8TBY0 533 aaKnown RBP12.09□□□□□ -0.47
CMSS1-208ENST00000496116 EXOC4Q96A65 974 aa12.09□□□□□ -0.47
CMSS1-208ENST00000496116 LRRC1Q9BTT6 524 aa12.09□□□□□ -0.47
CMSS1-208ENST00000496116 PDGFDQ9GZP0 370 aaPredicted RBP12.09□□□□□ -0.47
CMSS1-208ENST00000496116 KIAA1683Q9H0B3 1180 aa12.09□□□□□ -0.47
CMSS1-208ENST00000496116 SIX2Q9NPC8 291 aa12.09□□□□□ -0.47
CMSS1-208ENST00000496116 NAGPAQ9UK23 515 aa12.09□□□□□ -0.47
CMSS1-208ENST00000496116 ADAM21Q9UKJ8 722 aa12.09□□□□□ -0.47
CMSS1-208ENST00000496116 SAMM50Q9Y512 469 aa12.09□□□□□ -0.47
CMSS1-208ENST00000496116 CTDP1Q9Y5B0 961 aaPredicted RBP12.09□□□□□ -0.47
CMSS1-208ENST00000496116 GOLGB1Q14789 3259 aaKnown RBP12.09□□□□□ -0.47
CMSS1-208ENST00000496116 PHF20L1A8MW92 1017 aa12.08□□□□□ -0.47
CMSS1-208ENST00000496116 NFIBO00712 420 aa12.08□□□□□ -0.47
CMSS1-208ENST00000496116 ZMYND10O75800 440 aa12.08□□□□□ -0.47
CMSS1-208ENST00000496116 GFPT2O94808 682 aa12.08□□□□□ -0.47
CMSS1-208ENST00000496116 CCDC172P0C7W6 258 aa12.08□□□□□ -0.47
CMSS1-208ENST00000496116 MAPTP10636 758 aaKnown RBP12.08□□□□□ -0.47
CMSS1-208ENST00000496116 ALAS1P13196 640 aa12.08□□□□□ -0.47
CMSS1-208ENST00000496116 SF3B2Q13435 895 aaKnown RBP12.08□□□□□ -0.47
CMSS1-208ENST00000496116 C8orf74Q6P047 294 aa12.08□□□□□ -0.47
CMSS1-208ENST00000496116 CPXCR1Q8N123 301 aa12.08□□□□□ -0.47
CMSS1-208ENST00000496116 CLEC4DQ8WXI8 215 aa12.08□□□□□ -0.47
CMSS1-208ENST00000496116 TAF4BQ92750 862 aa12.08□□□□□ -0.47
CMSS1-208ENST00000496116 PACSIN1Q9BY11 444 aa12.08□□□□□ -0.47
CMSS1-208ENST00000496116 TMEM206Q9H813 350 aa12.08□□□□□ -0.47
CMSS1-208ENST00000496116 TBC1D22BQ9NU19 505 aa12.08□□□□□ -0.47
CMSS1-208ENST00000496116 DMAC2Q9NW81 257 aa12.08□□□□□ -0.47
CMSS1-208ENST00000496116 PSD3Q9NYI0 1048 aa12.08□□□□□ -0.47
CMSS1-208ENST00000496116 PIM2Q9P1W9 311 aa12.08□□□□□ -0.47
CMSS1-208ENST00000496116 COL20A1Q9P218 1284 aa12.08□□□□□ -0.47
CMSS1-208ENST00000496116 STIM2Q9P246 746 aa12.08□□□□□ -0.47
CMSS1-208ENST00000496116 VPS18Q9P253 973 aa12.08□□□□□ -0.47
CMSS1-208ENST00000496116 DBR1Q9UK59 544 aaKnown RBP12.08□□□□□ -0.47
CMSS1-208ENST00000496116 K7ENM7 598 aa12.08□□□□□ -0.48
CMSS1-208ENST00000496116 EXOC3O60645 756 aa12.08□□□□□ -0.48
CMSS1-208ENST00000496116 CTNND1O60716 968 aaKnown RBP12.08□□□□□ -0.48
CMSS1-208ENST00000496116 FTCDO95954 541 aa12.08□□□□□ -0.48
CMSS1-208ENST00000496116 AARSP49588 968 aaKnown RBP eCLIP12.08□□□□□ -0.482e-8■■■■■ 46.4
CMSS1-208ENST00000496116 CYP2J2P51589 502 aa12.08□□□□□ -0.48
CMSS1-208ENST00000496116 MTMR1Q13613 665 aa12.08□□□□□ -0.48
CMSS1-208ENST00000496116 TKFCQ3LXA3 575 aa12.08□□□□□ -0.48
CMSS1-208ENST00000496116 KSR1Q8IVT5 923 aa12.08□□□□□ -0.48
CMSS1-208ENST00000496116 CCDC43Q96MW1 224 aaKnown RBP12.08□□□□□ -0.48
CMSS1-208ENST00000496116 SELENOOQ9BVL4 669 aa12.08□□□□□ -0.48
CMSS1-208ENST00000496116 STK33Q9BYT3 514 aa12.08□□□□□ -0.48
CMSS1-208ENST00000496116 TAOK3Q9H2K8 898 aa12.08□□□□□ -0.48
CMSS1-208ENST00000496116 SLC38A10Q9HBR0 1119 aa12.08□□□□□ -0.48
CMSS1-208ENST00000496116 AGO4Q9HCK5 861 aaKnown RBP12.08□□□□□ -0.48
CMSS1-208ENST00000496116 PKD2L1Q9P0L9 805 aa12.08□□□□□ -0.48
CMSS1-208ENST00000496116 INTUQ9ULD6 942 aa12.08□□□□□ -0.48
CMSS1-208ENST00000496116 UBIAD1Q9Y5Z9 338 aa12.08□□□□□ -0.48
CMSS1-208ENST00000496116 ZHX2Q9Y6X8 837 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms