RNA–Protein interactions for RNA: ENST00000495755.1

VPS52-221, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-221ENST00000495755 NEK8Q86SG6 692 aa8.13□□□□□ -1.11
VPS52-221ENST00000495755 NPAS4Q8IUM7 802 aa8.13□□□□□ -1.11
VPS52-221ENST00000495755 ZNF710Q8N1W2 664 aa8.13□□□□□ -1.11
VPS52-221ENST00000495755 METTL13Q8N6R0 699 aa8.13□□□□□ -1.11
VPS52-221ENST00000495755 ADAMTS19Q8TE59 1207 aa8.13□□□□□ -1.11
VPS52-221ENST00000495755 WASF1Q92558 559 aa8.13□□□□□ -1.11
VPS52-221ENST00000495755 TNFRSF25Q93038 417 aa8.13□□□□□ -1.11
VPS52-221ENST00000495755 HLA-CQ95604 372 aa8.13□□□□□ -1.11
VPS52-221ENST00000495755 FAM20AQ96MK3 541 aa8.13□□□□□ -1.11
VPS52-221ENST00000495755 CEP89Q96ST8 783 aa8.13□□□□□ -1.11
VPS52-221ENST00000495755 ADAMTS10Q9H324 1103 aa8.13□□□□□ -1.11
VPS52-221ENST00000495755 KCNMB3Q9NPA1 279 aa8.13□□□□□ -1.11
VPS52-221ENST00000495755 RGS18Q9NS28 235 aa8.13□□□□□ -1.11
VPS52-221ENST00000495755 VAV3Q9UKW4 847 aa8.13□□□□□ -1.11
VPS52-221ENST00000495755 ST3GAL5Q9UNP4 418 aa8.13□□□□□ -1.11
VPS52-221ENST00000495755 GINS2Q9Y248 185 aa8.13□□□□□ -1.11
VPS52-221ENST00000495755 IGKV6-21A0A0C4DH24 114 aa8.12□□□□□ -1.11
VPS52-221ENST00000495755 TMEM150BA6NC51 233 aa8.12□□□□□ -1.11
VPS52-221ENST00000495755 C9IYK1 514 aa8.12□□□□□ -1.11
VPS52-221ENST00000495755 EML1O00423 815 aa8.12□□□□□ -1.11
VPS52-221ENST00000495755 TBX3O15119 743 aa8.12□□□□□ -1.11
VPS52-221ENST00000495755 GPR182O15218 404 aa8.12□□□□□ -1.11
VPS52-221ENST00000495755 JAK2O60674 1132 aa8.12□□□□□ -1.11
VPS52-221ENST00000495755 STAG3L1P0CL83 205 aa8.12□□□□□ -1.11
VPS52-221ENST00000495755 GCFC2P16383 781 aaKnown RBP8.12□□□□□ -1.11
VPS52-221ENST00000495755 TMOD1P28289 359 aa8.12□□□□□ -1.11
VPS52-221ENST00000495755 CTNNB1P35222 781 aa8.12□□□□□ -1.11
VPS52-221ENST00000495755 SARSP49591 514 aaKnown RBP8.12□□□□□ -1.11
VPS52-221ENST00000495755 KCNQ1P51787 676 aa8.12□□□□□ -1.11
VPS52-221ENST00000495755 NLRP11P59045 1033 aaKnown RBP8.12□□□□□ -1.11
VPS52-221ENST00000495755 ST3GAL1Q11201 340 aa8.12□□□□□ -1.11
VPS52-221ENST00000495755 NR5A1Q13285 461 aa8.12□□□□□ -1.11
VPS52-221ENST00000495755 PPP2R5CQ13362 524 aa8.12□□□□□ -1.11
VPS52-221ENST00000495755 DSC3Q14574 896 aa8.12□□□□□ -1.11
VPS52-221ENST00000495755 PIK3AP1Q6ZUJ8 805 aa8.12□□□□□ -1.11
VPS52-221ENST00000495755 SLC24A5Q71RS6 500 aa8.12□□□□□ -1.11
VPS52-221ENST00000495755 FAM228AQ86W67 206 aa8.12□□□□□ -1.11
VPS52-221ENST00000495755 CMTR2Q8IYT2 770 aaKnown RBP8.12□□□□□ -1.11
VPS52-221ENST00000495755 LRRC71Q8N4P6 559 aa8.12□□□□□ -1.11
VPS52-221ENST00000495755 NSUN7Q8NE18 718 aaKnown RBP8.12□□□□□ -1.11
VPS52-221ENST00000495755 HAS1Q92839 578 aa8.12□□□□□ -1.11
VPS52-221ENST00000495755 PPP1R16BQ96T49 567 aa8.12□□□□□ -1.11
VPS52-221ENST00000495755 OSMRQ99650 979 aa8.12□□□□□ -1.11
VPS52-221ENST00000495755 NAP1L4Q99733 375 aaKnown RBP8.12□□□□□ -1.11
VPS52-221ENST00000495755 ADAM2Q99965 735 aa8.12□□□□□ -1.11
VPS52-221ENST00000495755 PLVAPQ9BX97 442 aa8.12□□□□□ -1.11
VPS52-221ENST00000495755 C1orf112Q9NSG2 853 aa8.12□□□□□ -1.11
VPS52-221ENST00000495755 RWDD3Q9Y3V2 267 aa8.12□□□□□ -1.11
VPS52-221ENST00000495755 MRPL42Q9Y6G3 142 aaKnown RBP8.12□□□□□ -1.11
VPS52-221ENST00000495755 C5orf42Q9H799 3197 aa8.12□□□□□ -1.11
VPS52-221ENST00000495755 MYH9P35579 1960 aaKnown RBP8.11□□□□□ -1.11
VPS52-221ENST00000495755 TRIOO75962 3097 aa8.11□□□□□ -1.11
VPS52-221ENST00000495755 DENND3A2RUS2 1198 aa8.11□□□□□ -1.11
VPS52-221ENST00000495755 FAM205CA6NFA0 338 aa8.11□□□□□ -1.11
VPS52-221ENST00000495755 DDX11L8A8MPP1 907 aa8.11□□□□□ -1.11
VPS52-221ENST00000495755 TNFRSF10AO00220 468 aa8.11□□□□□ -1.11
VPS52-221ENST00000495755 GRM6O15303 877 aa8.11□□□□□ -1.11
VPS52-221ENST00000495755 CCNT1O60563 726 aaKnown RBP8.11□□□□□ -1.11
VPS52-221ENST00000495755 MAFO75444 373 aaPredicted RBP8.11□□□□□ -1.11
VPS52-221ENST00000495755 EIF4BP23588 611 aaKnown RBP8.11□□□□□ -1.11
VPS52-221ENST00000495755 KRT2P35908 639 aa8.11□□□□□ -1.11
VPS52-221ENST00000495755 QARSP47897 775 aaKnown RBP8.11□□□□□ -1.11
VPS52-221ENST00000495755 GATMP50440 423 aa8.11□□□□□ -1.11
VPS52-221ENST00000495755 GPC3P51654 580 aa8.11□□□□□ -1.11
VPS52-221ENST00000495755 PSMC5P62195 406 aa8.11□□□□□ -1.11
VPS52-221ENST00000495755 TBC1D8BQ0IIM8 1120 aa8.11□□□□□ -1.11
VPS52-221ENST00000495755 DRP2Q13474 957 aa8.11□□□□□ -1.11
VPS52-221ENST00000495755 COL19A1Q14993 1142 aa8.11□□□□□ -1.11
VPS52-221ENST00000495755 MTERF2Q49AM1 385 aa8.11□□□□□ -1.11
VPS52-221ENST00000495755 ANO5Q75V66 913 aa8.11□□□□□ -1.11
VPS52-221ENST00000495755 BANK1Q8NDB2 785 aa8.11□□□□□ -1.11
VPS52-221ENST00000495755 MAP7D2Q96T17 732 aa8.11□□□□□ -1.11
VPS52-221ENST00000495755 UHRF1Q96T88 793 aaPredicted RBP8.11□□□□□ -1.11
VPS52-221ENST00000495755 KIF2CQ99661 725 aa8.11□□□□□ -1.11
VPS52-221ENST00000495755 C11orf84Q9BUA3 381 aaPredicted RBP8.11□□□□□ -1.11
VPS52-221ENST00000495755 LMAN2LQ9H0V9 348 aa8.11□□□□□ -1.11
VPS52-221ENST00000495755 RNF216Q9NWF9 866 aaPredicted RBP8.11□□□□□ -1.11
VPS52-221ENST00000495755 SEPT9Q9UHD8 586 aaPredicted RBP8.11□□□□□ -1.11
VPS52-221ENST00000495755 PLAGL2Q9UPG8 496 aa8.11□□□□□ -1.11
VPS52-221ENST00000495755 AKT3Q9Y243 479 aa8.11□□□□□ -1.11
VPS52-221ENST00000495755 PCDHB7Q9Y5E2 793 aa8.11□□□□□ -1.11
VPS52-221ENST00000495755 EVPLQ92817 2033 aa8.11□□□□□ -1.11
VPS52-221ENST00000495755 NCOR1O75376 2440 aa8.11□□□□□ -1.11
VPS52-221ENST00000495755 LOXHD1Q8IVV2 1947 aa8.11□□□□□ -1.11
VPS52-221ENST00000495755 WDR81Q562E7 1941 aa8.1□□□□□ -1.11
VPS52-221ENST00000495755 BTBD18B2RXH4 712 aa8.1□□□□□ -1.11
VPS52-221ENST00000495755 MMP1P03956 469 aa8.1□□□□□ -1.11
VPS52-221ENST00000495755 P4HBP07237 508 aaKnown RBP8.1□□□□□ -1.11
VPS52-221ENST00000495755 DARSP14868 501 aaKnown RBP8.1□□□□□ -1.11
VPS52-221ENST00000495755 CDC42EP1Q00587 391 aa8.1□□□□□ -1.11
VPS52-221ENST00000495755 SPIRE1Q08AE8 756 aa8.1□□□□□ -1.11
VPS52-221ENST00000495755 CAMK1Q14012 370 aa8.1□□□□□ -1.11
VPS52-221ENST00000495755 EPHA7Q15375 998 aa8.1□□□□□ -1.11
VPS52-221ENST00000495755 LEXMQ3ZCV2 418 aa8.1□□□□□ -1.11
VPS52-221ENST00000495755 C8orf34Q49A92 452 aa8.1□□□□□ -1.11
VPS52-221ENST00000495755 PAN2Q504Q3 1202 aaKnown RBP8.1□□□□□ -1.11
VPS52-221ENST00000495755 TIGD5Q53EQ6 642 aa8.1□□□□□ -1.11
VPS52-221ENST00000495755 NAALADL2Q58DX5 795 aa8.1□□□□□ -1.11
VPS52-221ENST00000495755 TCEAL5Q5H9L2 206 aa8.1□□□□□ -1.11
VPS52-221ENST00000495755 FAM102BQ5T8I3 360 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms