RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 ZNF654Q8IZM8 581 aa15.35■□□□□ 0.05
COL1A1-209ENST00000495677 TMTC2Q8N394 836 aa15.35■□□□□ 0.05
COL1A1-209ENST00000495677 SRBD1Q8N5C6 995 aaKnown RBP15.35■□□□□ 0.05
COL1A1-209ENST00000495677 RWDD1Q9H446 243 aaPredicted RBP15.35■□□□□ 0.05
COL1A1-209ENST00000495677 SPG21Q9NZD8 308 aa15.35■□□□□ 0.05
COL1A1-209ENST00000495677 PKD2L1Q9P0L9 805 aa15.35■□□□□ 0.05
COL1A1-209ENST00000495677 MTCL1Q9Y4B5 1905 aaKnown RBP15.35■□□□□ 0.05
COL1A1-209ENST00000495677 C2orf71A6NGG8 1288 aa15.34■□□□□ 0.05
COL1A1-209ENST00000495677 FGFR1P11362 822 aa15.34■□□□□ 0.05
COL1A1-209ENST00000495677 SMC1AQ14683 1233 aaKnown RBP15.34■□□□□ 0.05
COL1A1-209ENST00000495677 B4GALNT3Q6L9W6 998 aa15.34■□□□□ 0.05
COL1A1-209ENST00000495677 LLGL2Q6P1M3 1020 aa15.34■□□□□ 0.05
COL1A1-209ENST00000495677 ABHD15Q6UXT9 468 aa15.34■□□□□ 0.05
COL1A1-209ENST00000495677 FAM228AQ86W67 206 aa15.34■□□□□ 0.05
COL1A1-209ENST00000495677 ADSSL1Q8N142 457 aa15.34■□□□□ 0.05
COL1A1-209ENST00000495677 ZNF710Q8N1W2 664 aa15.34■□□□□ 0.05
COL1A1-209ENST00000495677 ZNF558Q96NG5 402 aa15.34■□□□□ 0.05
COL1A1-209ENST00000495677 APOL5Q9BWW9 433 aa15.34■□□□□ 0.05
COL1A1-209ENST00000495677 RNF19AQ9NV58 838 aa15.34■□□□□ 0.05
COL1A1-209ENST00000495677 GINS2Q9Y248 185 aa15.34■□□□□ 0.05
COL1A1-209ENST00000495677 IRAK3Q9Y616 596 aa15.34■□□□□ 0.05
COL1A1-209ENST00000495677 ZNF292O60281 2723 aa15.34■□□□□ 0.05
COL1A1-209ENST00000495677 MEIS1O00470 390 aa15.33■□□□□ 0.04
COL1A1-209ENST00000495677 CLASP2O75122 1294 aaKnown RBP15.33■□□□□ 0.04
COL1A1-209ENST00000495677 GPR32O75388 356 aa15.33■□□□□ 0.04
COL1A1-209ENST00000495677 ARP10275 920 aa15.33■□□□□ 0.04
COL1A1-209ENST00000495677 SP100P23497 879 aaPredicted RBP15.33■□□□□ 0.04
COL1A1-209ENST00000495677 BMS1Q14692 1282 aaKnown RBP15.33■□□□□ 0.04
COL1A1-209ENST00000495677 ATAT1Q5SQI0 421 aa15.33■□□□□ 0.04
COL1A1-209ENST00000495677 KIAA1841Q6NSI8 718 aa15.33■□□□□ 0.04
COL1A1-209ENST00000495677 FRMD5Q7Z6J6 570 aa15.33■□□□□ 0.04
COL1A1-209ENST00000495677 MB21D2Q8IYB1 491 aaPredicted RBP15.33■□□□□ 0.04
COL1A1-209ENST00000495677 LRRC43Q8N309 656 aa15.33■□□□□ 0.04
COL1A1-209ENST00000495677 CYP2W1Q8TAV3 490 aa15.33■□□□□ 0.04
COL1A1-209ENST00000495677 SEMA4AQ9H3S1 761 aa15.33■□□□□ 0.04
COL1A1-209ENST00000495677 LY9Q9HBG7 655 aa15.33■□□□□ 0.04
COL1A1-209ENST00000495677 TSHZ2Q9NRE2 1034 aa15.33■□□□□ 0.04
COL1A1-209ENST00000495677 CARNS1A5YM72 827 aa15.32■□□□□ 0.04
COL1A1-209ENST00000495677 ZBTB42B2RXF5 422 aa15.32■□□□□ 0.04
COL1A1-209ENST00000495677 AOC1P19801 751 aa15.32■□□□□ 0.04
COL1A1-209ENST00000495677 PTH1RQ03431 593 aa15.32■□□□□ 0.04
COL1A1-209ENST00000495677 ITGB3BPQ13352 177 aaPredicted RBP15.32■□□□□ 0.04
COL1A1-209ENST00000495677 GIT2Q14161 759 aa15.32■□□□□ 0.04
COL1A1-209ENST00000495677 UBE2SQ16763 222 aa15.32■□□□□ 0.04
COL1A1-209ENST00000495677 CEP55Q53EZ4 464 aa15.32■□□□□ 0.04
COL1A1-209ENST00000495677 FAM160B1Q5W0V3 765 aa15.32■□□□□ 0.04
COL1A1-209ENST00000495677 SLC39A11Q8N1S5 342 aa15.32■□□□□ 0.04
COL1A1-209ENST00000495677 TDRD5Q8NAT2 981 aaKnown RBP15.32■□□□□ 0.04
COL1A1-209ENST00000495677 RUFY2Q8WXA3 655 aa15.32■□□□□ 0.04
COL1A1-209ENST00000495677 RSPH1Q8WYR4 309 aa15.32■□□□□ 0.04
COL1A1-209ENST00000495677 RTP3Q9BQQ7 232 aa15.32■□□□□ 0.04
COL1A1-209ENST00000495677 MFSD1Q9H3U5 465 aa15.32■□□□□ 0.04
COL1A1-209ENST00000495677 AGO4Q9HCK5 861 aaKnown RBP15.32■□□□□ 0.04
COL1A1-209ENST00000495677 DZANK1Q9NVP4 752 aa15.32■□□□□ 0.04
COL1A1-209ENST00000495677 LIMD1Q9UGP4 676 aa15.32■□□□□ 0.04
COL1A1-209ENST00000495677 CDH22Q9UJ99 828 aa15.32■□□□□ 0.04
COL1A1-209ENST00000495677 EP300Q09472 2414 aaPredicted RBP15.32■□□□□ 0.04
COL1A1-209ENST00000495677 DOCK8Q8NF50 2099 aa15.31■□□□□ 0.04
COL1A1-209ENST00000495677 PLEKHA8P1O95397 391 aa15.31■□□□□ 0.04
COL1A1-209ENST00000495677 EOMESO95936 686 aa15.31■□□□□ 0.04
COL1A1-209ENST00000495677 FOSP01100 380 aaPredicted RBP15.31■□□□□ 0.04
COL1A1-209ENST00000495677 CALM1P0DP23 149 aa15.31■□□□□ 0.04
COL1A1-209ENST00000495677 CALM2P0DP24 149 aa15.31■□□□□ 0.04
COL1A1-209ENST00000495677 CALM3P0DP25 149 aa15.31■□□□□ 0.04
COL1A1-209ENST00000495677 CWF19L1Q69YN2 538 aaKnown RBP15.31■□□□□ 0.04
COL1A1-209ENST00000495677 NIPA1Q7RTP0 329 aa15.31■□□□□ 0.04
COL1A1-209ENST00000495677 ECHDC2Q86YB7 292 aa15.31■□□□□ 0.04
COL1A1-209ENST00000495677 OSMRQ99650 979 aa15.31■□□□□ 0.04
COL1A1-209ENST00000495677 SMOC2Q9H3U7 446 aa15.31■□□□□ 0.04
COL1A1-209ENST00000495677 CYP26B1Q9NR63 512 aa15.31■□□□□ 0.04
COL1A1-209ENST00000495677 TAF6LQ9Y6J9 622 aa15.31■□□□□ 0.04
COL1A1-209ENST00000495677 C22orf31O95567 290 aa15.3■□□□□ 0.04
COL1A1-209ENST00000495677 ASGR2P07307 311 aa15.3■□□□□ 0.04
COL1A1-209ENST00000495677 ZSCAN20P17040 1043 aaPredicted RBP15.3■□□□□ 0.04
COL1A1-209ENST00000495677 NPR3P17342 541 aa15.3■□□□□ 0.04
COL1A1-209ENST00000495677 ATP4AP20648 1035 aa15.3■□□□□ 0.04
COL1A1-209ENST00000495677 IBSPP21815 317 aaPredicted RBP15.3■□□□□ 0.04
COL1A1-209ENST00000495677 LIFRP42702 1097 aa15.3■□□□□ 0.04
COL1A1-209ENST00000495677 KIZQ2M2Z5 673 aa15.3■□□□□ 0.04
COL1A1-209ENST00000495677 CCDC60Q8IWA6 550 aaPredicted RBP15.3■□□□□ 0.04
COL1A1-209ENST00000495677 CCDC105Q8IYK2 499 aa15.3■□□□□ 0.04
COL1A1-209ENST00000495677 ABI1Q8IZP0 508 aa15.3■□□□□ 0.04
COL1A1-209ENST00000495677 BBXQ8WY36 941 aaPredicted RBP15.3■□□□□ 0.04
COL1A1-209ENST00000495677 TMEM87BQ96K49 555 aa15.3■□□□□ 0.04
COL1A1-209ENST00000495677 MYL10Q9BUA6 226 aa15.3■□□□□ 0.04
COL1A1-209ENST00000495677 ZNF302Q9NR11 478 aa15.3■□□□□ 0.04
COL1A1-209ENST00000495677 DBR1Q9UK59 544 aaKnown RBP15.3■□□□□ 0.04
COL1A1-209ENST00000495677 MAFBQ9Y5Q3 323 aaPredicted RBP15.3■□□□□ 0.04
COL1A1-209ENST00000495677 DMXL1Q9Y485 3027 aa15.3■□□□□ 0.04
COL1A1-209ENST00000495677 A0A0U1RQF3 1178 aa15.29■□□□□ 0.04
COL1A1-209ENST00000495677 MAGEB2O15479 319 aa15.29■□□□□ 0.04
COL1A1-209ENST00000495677 DHX15O43143 795 aaKnown RBP15.29■□□□□ 0.04
COL1A1-209ENST00000495677 CXCL14O95715 111 aa15.29■□□□□ 0.04
COL1A1-209ENST00000495677 CCNE2O96020 404 aa15.29■□□□□ 0.04
COL1A1-209ENST00000495677 IGHDP01880 384 aa15.29■□□□□ 0.04
COL1A1-209ENST00000495677 ALDH7A1P49419 539 aaKnown RBP15.29■□□□□ 0.04
COL1A1-209ENST00000495677 POLGP54098 1239 aaPredicted RBP15.29■□□□□ 0.04
COL1A1-209ENST00000495677 PDXDC2PQ6P474 469 aa15.29■□□□□ 0.04
COL1A1-209ENST00000495677 ZNF598Q86UK7 904 aaKnown RBP15.29■□□□□ 0.04
COL1A1-209ENST00000495677 SLC22A17Q8WUG5 538 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms