RNA–Protein interactions for RNA: ENST00000494943.5

PHC3-214, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best) BASIC

Gene PHC3, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-214ENST00000494943 CXCR5P32302 372 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 RNASE9P60153 205 aaKnown RBP6.56□□□□□ -1.36
PHC3-214ENST00000494943 MCL1Q07820 350 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 TFCP2Q12800 502 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 NONOQ15233 471 aaKnown RBP eCLIP6.56□□□□□ -1.36
PHC3-214ENST00000494943 KYNUQ16719 465 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 IQCKQ8N0W5 287 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 TRIM63Q969Q1 353 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 NSL1Q96IY1 281 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 CNGB3Q9NQW8 809 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 EHD2Q9NZN4 543 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 FBXO2Q9UK22 296 aaPredicted RBP6.56□□□□□ -1.36
PHC3-214ENST00000494943 PA2G4Q9UQ80 394 aaKnown RBP6.56□□□□□ -1.36
PHC3-214ENST00000494943 ATP6V0A2Q9Y487 856 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 CRYBG1Q9Y4K1 1723 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 JCADQ9P266 1359 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 MAN1A2O60476 641 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 FTCDO95954 541 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 ALADP13716 330 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 PGM1P36871 562 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 STAT2P52630 851 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 PLTPP55058 493 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 MDM2Q00987 491 aaPredicted RBP6.56□□□□□ -1.36
PHC3-214ENST00000494943 NCCRP1Q6ZVX7 275 aaPredicted RBP6.56□□□□□ -1.36
PHC3-214ENST00000494943 GSTA5Q7RTV2 222 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 ANKLE2Q86XL3 938 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 SCG3Q8WXD2 468 aaKnown RBP6.56□□□□□ -1.36
PHC3-214ENST00000494943 ZNF570Q96NI8 536 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 MYD88Q99836 296 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 RNF26Q9BY78 433 aaPredicted RBP6.56□□□□□ -1.36
PHC3-214ENST00000494943 EHD4Q9H223 541 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 TMEM165Q9HC07 324 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 UBAP1Q9NZ09 502 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 SPATA7Q9P0W8 599 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 ABCC6O95255 1503 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 RBM47A0AV96 593 aaKnown RBP6.56□□□□□ -1.36
PHC3-214ENST00000494943 TTLL1O95922 423 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 IFNAR1P17181 557 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 TUBA1BP68363 451 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 MTHFSDQ2M296 383 aaKnown RBP6.56□□□□□ -1.36
PHC3-214ENST00000494943 C1orf146Q5VVC0 180 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 SNX30Q5VWJ9 437 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 KRT80Q6KB66 452 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 POTEAQ6S8J7 498 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 TUBA1AQ71U36 451 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 WDR75Q8IWA0 830 aaKnown RBP6.56□□□□□ -1.36
PHC3-214ENST00000494943 PROCA1Q8NCQ7 364 aaPredicted RBP6.56□□□□□ -1.36
PHC3-214ENST00000494943 ITPKCQ96DU7 683 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 CCDC134Q9H6E4 229 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 SEC63Q9UGP8 760 aaKnown RBP6.56□□□□□ -1.36
PHC3-214ENST00000494943 PCDH11XQ9BZA7 1347 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 KPNA4O00629 521 aaPredicted RBP6.56□□□□□ -1.36
PHC3-214ENST00000494943 SH2B2O14492 632 aaPredicted RBP6.56□□□□□ -1.36
PHC3-214ENST00000494943 SNX3O60493 162 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 SARSP49591 514 aaKnown RBP6.56□□□□□ -1.36
PHC3-214ENST00000494943 NT5C2P49902 561 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 PDE4BQ07343 736 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 ST3GAL1Q11201 340 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 BNIP1Q12981 228 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 RASA3Q14644 834 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 DIXDC1Q155Q3 683 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 ZNF174Q15697 407 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 DPY19L2Q6NUT2 758 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 ZNF589Q86UQ0 364 aaPredicted RBP6.56□□□□□ -1.36
PHC3-214ENST00000494943 CREG2Q8IUH2 290 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 KIF2BQ8N4N8 673 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 GDAP1Q8TB36 358 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 DGCR14Q96DF8 476 aaKnown RBP6.56□□□□□ -1.36
PHC3-214ENST00000494943 ERP27Q96DN0 273 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 RBM17Q96I25 401 aaKnown RBP6.56□□□□□ -1.36
PHC3-214ENST00000494943 ERGIC2Q96RQ1 377 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 OSBPL8Q9BZF1 889 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 OSBPL7Q9BZF2 842 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 BLZF1Q9H2G9 400 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 ZNF287Q9HBT7 754 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 CEP170BQ9Y4F5 1589 aaPredicted RBP6.56□□□□□ -1.36
PHC3-214ENST00000494943 DLC1Q96QB1 1528 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 TULP4Q9NRJ4 1543 aa6.56□□□□□ -1.36
PHC3-214ENST00000494943 SETD1AO15047 1707 aaKnown RBP6.55□□□□□ -1.36
PHC3-214ENST00000494943 DNM1LO00429 736 aa6.55□□□□□ -1.36
PHC3-214ENST00000494943 BRAFP15056 766 aa6.55□□□□□ -1.36
PHC3-214ENST00000494943 PTDSS1P48651 473 aaKnown RBP6.55□□□□□ -1.36
PHC3-214ENST00000494943 CDK7P50613 346 aa6.55□□□□□ -1.36
PHC3-214ENST00000494943 GJC2Q5T442 439 aaPredicted RBP6.55□□□□□ -1.36
PHC3-214ENST00000494943 ZNF530Q6P9A1 599 aaPredicted RBP6.55□□□□□ -1.36
PHC3-214ENST00000494943 MYOCDQ8IZQ8 938 aa6.55□□□□□ -1.36
PHC3-214ENST00000494943 PAF1Q8N7H5 531 aa6.55□□□□□ -1.36
PHC3-214ENST00000494943 TTLL11Q8NHH1 800 aa6.55□□□□□ -1.36
PHC3-214ENST00000494943 SCFD1Q8WVM8 642 aa6.55□□□□□ -1.36
PHC3-214ENST00000494943 POLR3CQ9BUI4 534 aaPredicted RBP6.55□□□□□ -1.36
PHC3-214ENST00000494943 EFHD1Q9BUP0 239 aa6.55□□□□□ -1.36
PHC3-214ENST00000494943 ARHGEF3Q9NR81 526 aa6.55□□□□□ -1.36
PHC3-214ENST00000494943 PANK4Q9NVE7 773 aa6.55□□□□□ -1.36
PHC3-214ENST00000494943 PLK2Q9NYY3 685 aa6.55□□□□□ -1.36
PHC3-214ENST00000494943 ARMCX3Q9UH62 379 aaPredicted RBP6.55□□□□□ -1.36
PHC3-214ENST00000494943 KRT38O76015 456 aa6.55□□□□□ -1.36
PHC3-214ENST00000494943 NUDT17P0C025 328 aa6.55□□□□□ -1.36
PHC3-214ENST00000494943 SCG2P13521 617 aa6.55□□□□□ -1.36
PHC3-214ENST00000494943 MCM7P33993 719 aa6.55□□□□□ -1.36
PHC3-214ENST00000494943 PBX1P40424 430 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms