RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 AKAP3O75969 853 aa16.69■□□□□ 0.26
SDF4-207ENST00000494748 EXOC3L4Q17RC7 722 aa16.69■□□□□ 0.26
SDF4-207ENST00000494748 SPAG5Q96R06 1193 aa16.69■□□□□ 0.26
SDF4-207ENST00000494748 SLAIN2Q9P270 581 aa16.69■□□□□ 0.26
SDF4-207ENST00000494748 GREB1LQ9C091 1923 aaPredicted RBP16.68■□□□□ 0.26
SDF4-207ENST00000494748 KIAA0391O15091 583 aaKnown RBP16.68■□□□□ 0.26
SDF4-207ENST00000494748 CETN3O15182 167 aa16.68■□□□□ 0.26
SDF4-207ENST00000494748 LDHBP07195 334 aaKnown RBP16.68■□□□□ 0.26
SDF4-207ENST00000494748 PLS1Q14651 629 aa16.68■□□□□ 0.26
SDF4-207ENST00000494748 PPP1R7Q15435 360 aa16.68■□□□□ 0.26
SDF4-207ENST00000494748 MSL1Q68DK7 614 aa16.68■□□□□ 0.26
SDF4-207ENST00000494748 GLG1Q92896 1179 aa16.68■□□□□ 0.26
SDF4-207ENST00000494748 SNHG28P0DPA3 235 aa16.68■□□□□ 0.26
SDF4-207ENST00000494748 PTGIRP43119 386 aa16.68■□□□□ 0.26
SDF4-207ENST00000494748 TNNI2P48788 182 aa16.68■□□□□ 0.26
SDF4-207ENST00000494748 PMS2P54278 862 aa16.68■□□□□ 0.26
SDF4-207ENST00000494748 SYCE1Q8N0S2 351 aa16.68■□□□□ 0.26
SDF4-207ENST00000494748 ABCF3Q9NUQ8 709 aa16.68■□□□□ 0.26
SDF4-207ENST00000494748 MED24O75448 989 aa16.67■□□□□ 0.26
SDF4-207ENST00000494748 HOOK3Q86VS8 718 aa16.67■□□□□ 0.26
SDF4-207ENST00000494748 SLC35C1Q96A29 364 aa16.67■□□□□ 0.26
SDF4-207ENST00000494748 TBC1D31Q96DN5 1066 aa16.67■□□□□ 0.26
SDF4-207ENST00000494748 AZI2Q9H6S1 392 aa16.67■□□□□ 0.26
SDF4-207ENST00000494748 ZNF652Q9Y2D9 606 aa16.67■□□□□ 0.26
SDF4-207ENST00000494748 KDM3AQ9Y4C1 1321 aa16.67■□□□□ 0.26
SDF4-207ENST00000494748 TM4SF1P30408 202 aa16.67■□□□□ 0.26
SDF4-207ENST00000494748 EPS15P42566 896 aa16.67■□□□□ 0.26
SDF4-207ENST00000494748 DR1Q01658 176 aa16.67■□□□□ 0.26
SDF4-207ENST00000494748 ZNF268Q14587 947 aaPredicted RBP16.67■□□□□ 0.26
SDF4-207ENST00000494748 SLC35G2Q8TBE7 412 aa16.67■□□□□ 0.26
SDF4-207ENST00000494748 LMBR1Q8WVP7 490 aa16.67■□□□□ 0.26
SDF4-207ENST00000494748 BORCS6Q96GS4 357 aa16.67■□□□□ 0.26
SDF4-207ENST00000494748 GPR88Q9GZN0 384 aa16.67■□□□□ 0.26
SDF4-207ENST00000494748 ANKRD2Q9GZV1 360 aa16.67■□□□□ 0.26
SDF4-207ENST00000494748 NT5C3AQ9H0P0 336 aa16.67■□□□□ 0.26
SDF4-207ENST00000494748 ARMCX3Q9UH62 379 aaPredicted RBP16.67■□□□□ 0.26
SDF4-207ENST00000494748 ASTN1O14525 1302 aa16.67■□□□□ 0.26
SDF4-207ENST00000494748 SPDYE3A6NKU9 549 aa16.67■□□□□ 0.26
SDF4-207ENST00000494748 RFC4P35249 363 aa16.67■□□□□ 0.26
SDF4-207ENST00000494748 GALNTL6Q49A17 601 aa16.67■□□□□ 0.26
SDF4-207ENST00000494748 ZDHHC14Q8IZN3 488 aa16.67■□□□□ 0.26
SDF4-207ENST00000494748 FBXO25Q8TCJ0 367 aa16.67■□□□□ 0.26
SDF4-207ENST00000494748 U2AF1L4Q8WU68 220 aaKnown RBP16.67■□□□□ 0.26
SDF4-207ENST00000494748 UIMC1Q96RL1 719 aa16.67■□□□□ 0.26
SDF4-207ENST00000494748 PRMT1Q99873 361 aaKnown RBP16.67■□□□□ 0.26
SDF4-207ENST00000494748 RAB17Q9H0T7 212 aa16.67■□□□□ 0.26
SDF4-207ENST00000494748 BCAS3Q9H6U6 928 aa16.67■□□□□ 0.26
SDF4-207ENST00000494748 PCDHA12Q9UN75 941 aa16.67■□□□□ 0.26
SDF4-207ENST00000494748 TRPC6Q9Y210 931 aa16.67■□□□□ 0.26
SDF4-207ENST00000494748 PLIN4Q96Q06 1357 aa16.67■□□□□ 0.26
SDF4-207ENST00000494748 SPATA31A1Q5TZJ5 1347 aa16.66■□□□□ 0.26
SDF4-207ENST00000494748 PITPNM2Q9BZ72 1349 aa16.66■□□□□ 0.26
SDF4-207ENST00000494748 RARAP10276 462 aa16.66■□□□□ 0.26
SDF4-207ENST00000494748 CASP4P49662 377 aa16.66■□□□□ 0.26
SDF4-207ENST00000494748 CLNS1AP54105 237 aaKnown RBP16.66■□□□□ 0.26
SDF4-207ENST00000494748 SF3A3Q12874 501 aaKnown RBP eCLIP16.66■□□□□ 0.26
SDF4-207ENST00000494748 TBC1D9BQ66K14 1250 aa16.66■□□□□ 0.26
SDF4-207ENST00000494748 TRPM8Q7Z2W7 1104 aa16.66■□□□□ 0.26
SDF4-207ENST00000494748 ALG3Q92685 438 aa16.66■□□□□ 0.26
SDF4-207ENST00000494748 BAIAP2L1Q9UHR4 511 aa16.66■□□□□ 0.26
SDF4-207ENST00000494748 ATF5Q9Y2D1 282 aaPredicted RBP16.66■□□□□ 0.26
SDF4-207ENST00000494748 RPSAP08865 295 aaKnown RBP16.66■□□□□ 0.26
SDF4-207ENST00000494748 VCAM1P19320 739 aa16.66■□□□□ 0.26
SDF4-207ENST00000494748 DRG2P55039 364 aaKnown RBP16.66■□□□□ 0.26
SDF4-207ENST00000494748 SLC8A3P57103 927 aa16.66■□□□□ 0.26
SDF4-207ENST00000494748 GIT2Q14161 759 aa16.66■□□□□ 0.26
SDF4-207ENST00000494748 SLC29A2Q14542 456 aa16.66■□□□□ 0.26
SDF4-207ENST00000494748 JAMLQ86YT9 394 aa16.66■□□□□ 0.26
SDF4-207ENST00000494748 CCDC63Q8NA47 563 aa16.66■□□□□ 0.26
SDF4-207ENST00000494748 NEK9Q8TD19 979 aa16.66■□□□□ 0.26
SDF4-207ENST00000494748 HOOK2Q96ED9 719 aa16.66■□□□□ 0.26
SDF4-207ENST00000494748 AMFRQ9UKV5 643 aa16.66■□□□□ 0.26
SDF4-207ENST00000494748 NCALDP61601 193 aa16.66■□□□□ 0.26
SDF4-207ENST00000494748 ZNF568Q3ZCX4 644 aa16.66■□□□□ 0.26
SDF4-207ENST00000494748 ARHGEF26Q96DR7 871 aa16.66■□□□□ 0.26
SDF4-207ENST00000494748 TMEM109Q9BVC6 243 aa16.66■□□□□ 0.26
SDF4-207ENST00000494748 JMJD4Q9H9V9 463 aa16.66■□□□□ 0.26
SDF4-207ENST00000494748 COG5Q9UP83 839 aa16.66■□□□□ 0.26
SDF4-207ENST00000494748 L3MBTL1Q9Y468 752 aa16.66■□□□□ 0.26
SDF4-207ENST00000494748 KCNJ2P63252 427 aa16.65■□□□□ 0.26
SDF4-207ENST00000494748 SPIRE1Q08AE8 756 aa16.65■□□□□ 0.26
SDF4-207ENST00000494748 KNOP1Q1ED39 458 aaKnown RBP16.65■□□□□ 0.26
SDF4-207ENST00000494748 AADACL2Q6P093 401 aa16.65■□□□□ 0.26
SDF4-207ENST00000494748 COL23A1Q86Y22 540 aaPredicted RBP16.65■□□□□ 0.26
SDF4-207ENST00000494748 NSMCE1Q8WV22 266 aa16.65■□□□□ 0.26
SDF4-207ENST00000494748 ELAC2Q9BQ52 826 aaKnown RBP16.65■□□□□ 0.26
SDF4-207ENST00000494748 CARD9Q9H257 536 aa16.65■□□□□ 0.26
SDF4-207ENST00000494748 DHX36Q9H2U1 1008 aaKnown RBP16.65■□□□□ 0.26
SDF4-207ENST00000494748 SEMA4AQ9H3S1 761 aa16.65■□□□□ 0.26
SDF4-207ENST00000494748 ZNFX1Q9P2E3 1918 aaKnown RBP16.65■□□□□ 0.26
SDF4-207ENST00000494748 MYCNP04198 464 aaPredicted RBP16.65■□□□□ 0.26
SDF4-207ENST00000494748 ADAT2Q7Z6V5 191 aaKnown RBP16.65■□□□□ 0.26
SDF4-207ENST00000494748 EPS8L3Q8TE67 593 aaKnown RBP16.65■□□□□ 0.26
SDF4-207ENST00000494748 AGAP11Q8TF27 550 aa16.65■□□□□ 0.26
SDF4-207ENST00000494748 TCP11Q8WWU5 503 aa16.65■□□□□ 0.26
SDF4-207ENST00000494748 ACSBG1Q96GR2 724 aa16.65■□□□□ 0.26
SDF4-207ENST00000494748 SELENOSQ9BQE4 189 aa16.65■□□□□ 0.26
SDF4-207ENST00000494748 BMP2KQ9NSY1 1161 aaPredicted RBP16.65■□□□□ 0.26
SDF4-207ENST00000494748 C15orf41Q9Y2V0 281 aa16.65■□□□□ 0.26
SDF4-207ENST00000494748 RBBP6Q7Z6E9 1792 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms